Human Gene Set: ESC_V6.5_UP_EARLY.V1_DN

Standard name ESC_V6.5_UP_EARLY.V1_DN
Systematic name M2769
Brief description Genes down-regulated during early stages of differentiation of embryoid bodies from V6.5 embryonic stem cells.
Full description or abstract An 11-point time course study comparing V6.5 embryonic stem cells versus embryoid bodies. Time course 0 hours, 6 hours, 12 hours, 18 hours, 24 hours, 36 hours, 48 hours, 4 days, 7 days, 9 days, and 14 days.
Collection C6: Oncogenic Signature
Source publication Pubmed 17394647   Authors: Hailesellasse Sene K,Porter CJ,Palidwor G,Perez-Iratxeta C,Muro EM,Campbell PA,Rudnicki MA,Andrade-Navarro MA
Exact source Early (12, 18 and 24 h) vs control; bottom 200 genes (diff. of means)
Related gene sets (show 7 additional gene sets from the source publication)

(show 2 gene sets from the same authors)
External links
Filtered by similarity ?
Source species Mus musculus
Contributed by Pablo Tamayo (Broad Institute)
Source platform or
identifier namespace
Dataset references (show 1 datasets)
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Further investigate these 162 genes
Gene families ? Categorize these 162 genes by gene family
Show members (show 200 source identifiers mapped to 162 genes)
Version history 7.1: Fixed RIKEN identifiers.

See MSigDB license terms here. Please note that certain gene sets have special access terms.