Standard name |
GAJATE_RESPONSE_TO_TRABECTEDIN_DN |
Systematic name |
M16617 |
Brief description |
Genes down-regulated in HeLa cells (cervical carcinoma) by trabectedin [PubChem=3199]. |
Full description or abstract |
We have found that ecteinascidin-743 (ET-743) inhibited cell proliferation at 1-10 ng/ml, leading to S and G(2)/M arrest and subsequent apoptosis, and induced early apoptosis without previous cell cycle arrest at 10-100 ng/ml in cancer cells. ET-743-mediated apoptosis, did not involve Fas/CD95. ET-743 induced c-Jun NH(2)-terminal kinase (JNK) and caspase-3 activation, and JNK and caspase inhibition prevented ET-743-induced apoptosis. ET-743 failed to promote apoptosis in caspase-3-deficient MCF-7 cells, further implicating caspase-3 in its proapoptotic action. Overexpression of bcl-2 by gene transfer abrogated ET-743-induced apoptosis, but cells underwent cell cycle arrest. ET-743 triggered cytochrome c release from mitochondria that was inhibited by Bcl-2 overexpression. Inhibition of transcription or protein synthesis did not prevent ET-743-induced apoptosis, but abrogated ET-743-induced cell cycle arrest. Microarray analyses revealed changes in the expression of a small number of cell cycle-related genes (p21, GADD45A, cyclin G2, MCM5, and histones) that suggested their putative involvement in ET-743-induced cell cycle arrest. These data indicate that ET-743 is a very potent anticancer drug showing dose-dependent cytostatic and proapoptotic effects through activation of two different signaling pathways, namely a transcription-dependent pathway leading to cell cycle arrest and a transcription-independent route leading to rapid apoptosis that involves mitochondria, JNK, and caspase-3. |
Collection |
C2: Curated CGP: Chemical and Genetic Perturbations |
Source publication |
Pubmed 12198119 Authors: Gajate C,An F,Mollinedo F |
Exact source |
Table 1: Fold change =< -2 |
Related gene sets |
(show 1 additional gene sets from the source publication)
(show 2 gene sets from the same authors)
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External links |
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Source species |
Homo sapiens |
Contributed by |
John Newman (University of Washington) |
Source platform or identifier namespace |
HUMAN_SEQ_ACCESSION |
Dataset references |
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NCI-60 cell lines (National Cancer Institute)
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
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these 20 genes
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20 genes by gene family
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Show members |
(show 20 source identifiers mapped to 20 genes)
Source Id |
NCBI (Entrez) Gene Id |
Gene Symbol |
Gene Description |
AA195301 |
79080 |
CCDC86 |
coiled-coil domain containing 86 [Source:... |
AA255502 |
8364 |
H4C3 |
H4 clustered histone 3 [Source:HGNC Symbo... |
AB020641 |
5218 |
CDK14 |
cyclin dependent kinase 14 [Source:HGNC S... |
AF036715 |
9482 |
STX8 |
syntaxin 8 [Source:HGNC Symbol;Acc:HGNC:1... |
AF042377 |
2762 |
GMDS |
GDP-mannose 4,6-dehydratase [Source:HGNC ... |
AF070598 |
10058 |
ABCB6 |
ATP binding cassette subfamily B member 6... |
AF096870 |
10626 |
TRIM16 |
tripartite motif containing 16 [Source:HG... |
AF097441 |
10667 |
FARS2 |
phenylalanyl-tRNA synthetase 2, mitochond... |
AJ006778 |
27340 |
UTP20 |
UTP20 small subunit processome component ... |
AL021154 |
1870 |
E2F2 |
E2F transcription factor 2 [Source:HGNC S... |
D64142 |
8971 |
H1-10 |
H1.10 linker histone [Source:HGNC Symbol;... |
M83822 |
987 |
LRBA |
LPS responsive beige-like anchor protein ... |
U28042 |
1662 |
DDX10 |
DEAD-box helicase 10 [Source:HGNC Symbol;... |
U63824 |
7004 |
TEAD4 |
TEA domain transcription factor 4 [Source... |
U95006 |
201254 |
CENPX |
centromere protein X [Source:HGNC Symbol;... |
X60484 |
8363 |
H4C11 |
H4 clustered histone 11 [Source:HGNC Symb... |
X69550 |
396 |
ARHGDIA |
Rho GDP dissociation inhibitor alpha [Sou... |
X74795 |
4174 |
MCM5 |
minichromosome maintenance complex compon... |
X81889 |
8502 |
PKP4 |
plakophilin 4 [Source:HGNC Symbol;Acc:HGN... |
Z75330 |
10274 |
STAG1 |
STAG1 cohesin complex component [Source:H... |
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Version history |
3.0: Renamed from ET743_HELA_DN
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