Human Gene Set: MOOTHA_VOXPHOS


Standard name MOOTHA_VOXPHOS
Systematic name M18264
Brief description Genes involved in oxidative phosphorylation; based on literature and sequence annotation resources and converted to Affymetrix HG-U133A probe sets.
Full description or abstract DNA microarrays can be used to identify gene expression changes characteristic of human disease. This is challenging, however, when relevant differences are subtle at the level of individual genes. We introduce an analytical strategy, Gene Set Enrichment Analysis, designed to detect modest but coordinate changes in the expression of groups of functionally related genes. Using this approach, we identify a set of genes involved in oxidative phosphorylation whose expression is coordinately decreased in human diabetic muscle. Expression of these genes is high at sites of insulin-mediated glucose disposal, activated by PGC-1alpha and correlated with total-body aerobic capacity. Our results associate this gene set with clinically important variation in human metabolism and illustrate the value of pathway relationships in the analysis of genomic profiling experiments.
Collection C2: Curated
      CGP: Chemical and Genetic Perturbations
Source publication Pubmed 12808457   Authors: Mootha VK,Lindgren CM,Eriksson KF,Subramanian A,Sihag S,Lehar J,Puigserver P,Carlsson E,Ridderstråle M,Laurila E,Houstis N,Daly MJ,Patterson N,Mesirov JP,Golub TR,Tamayo P,Spiegelman B,Lander ES,Hirschhorn JN,Altshuler D,Groop LC
Exact source Suppl. file: all_pathways/OXPHOS_HG-U133A_probes
Related gene sets (show 10 additional gene sets from the source publication)

(show 399 gene sets from any of these authors)
External links
Filtered by similarity ?
Source species Homo sapiens
Contributed by Vamsi Mootha (Broad Institute)
Source platform or
identifier namespace		 AFFY_HG_U133
Dataset references  
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)

Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Further investigate these 87 genes
Gene families ? Categorize these 87 genes by gene family
Show members (show 114 source identifiers mapped to 87 genes)
Version history 3.0: Renamed from MOOTHA_VOXPHOS

See MSigDB license terms here. Please note that certain gene sets have special access terms.