Standard name |
TIAN_BHLHA15_TARGETS |
Systematic name |
M2471 |
Brief description |
Genes up-regulated in both AGS and HGC-27 cells (gastric cancer) by BHLHA15 [GeneID=168620] transfection. |
Full description or abstract |
Little is known about how differentiating cells reorganize their cellular structure to perform specialized physiological functions. MIST1, an evolutionarily conserved transcription factor, is required for the formation of large, specialized secretory vesicles in gastric zymogenic (chief) cells (ZCs) as they differentiate from their mucous neck cell progenitors. Here, we show that MIST1 binds to highly conserved CATATG E-boxes to directly activate transcription of 6 genes, including those encoding the small GTPases RAB26 and RAB3D. We next show that RAB26 and RAB3D expression is significantly downregulated in Mist1(-)(/)(-) ZCs, suggesting that MIST1 establishes large secretory granules by inducing RAB transcription. To test this hypothesis, we transfected human gastric cancer cell lines stably expressing MIST1 with red fluorescent protein (RFP)-tagged pepsinogen C, a key secretory product of ZCs. Those cells upregulate expression of RAB26 and RAB3D to form large secretory granules, whereas control, non-MIST1-expressing cells do not. Moreover, granule formation in MIST1-expressing cells requires RAB activity because treatment with a RAB prenylation inhibitor and transfection of dominant negative RAB26 abrogate granule formation. Together, our data establish the molecular process by which a transcription factor can directly induce fundamental cellular architecture changes by increasing transcription of specific cellular effectors that act to organize a unique subcellular compartment. |
Collection |
C2: Curated CGP: Chemical and Genetic Perturbations |
Source publication |
Pubmed 20038531 Authors: Tian X,Jin RU,Bredemeyer AJ,Oates EJ,B?azewska KM,McKenna CE,Mills JC |
Exact source |
Table 1 |
Related gene sets |
(show 6 gene sets from the same authors)
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External links |
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Source species |
Homo sapiens |
Contributed by |
Arthur Liberzon (MSigDB Team) |
Source platform or identifier namespace |
HUMAN_GENE_SYMBOL |
Dataset references |
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
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these 16 genes
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Gene families ? |
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16 genes by gene family
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Show members |
(show 16 source identifiers mapped to 16 genes)
Source Id |
NCBI (Entrez) Gene Id |
Gene Symbol |
Gene Description |
ACP2 |
53 |
ACP2 |
acid phosphatase 2, lysosomal [Source:HGN... |
AQP3 |
360 |
AQP3 |
aquaporin 3 (Gill blood group) [Source:HG... |
ARRDC3 |
57561 |
ARRDC3 |
arrestin domain containing 3 [Source:HGNC... |
BRP44L |
51660 |
MPC1 |
mitochondrial pyruvate carrier 1 [Source:... |
CCPG1 |
9236 |
CCPG1 |
cell cycle progression 1 [Source:HGNC Sym... |
DISP1 |
84976 |
DISP1 |
dispatched RND transporter family member ... |
FAM63A |
55793 |
MINDY1 |
MINDY lysine 48 deubiquitinase 1 [Source:... |
FIGN |
55137 |
FIGN |
fidgetin, microtubule severing factor [So... |
FNDC3A |
22862 |
FNDC3A |
fibronectin type III domain containing 3A... |
MAP2K5 |
5607 |
MAP2K5 |
mitogen-activated protein kinase kinase 5... |
MGC13057 |
84281 |
C2orf88 |
chromosome 2 open reading frame 88 [Sourc... |
RAB26 |
25837 |
RAB26 |
RAB26, member RAS oncogene family [Source... |
RAB3D |
9545 |
RAB3D |
RAB3D, member RAS oncogene family [Source... |
SERPINI1 |
5274 |
SERPINI1 |
serpin family I member 1 [Source:HGNC Sym... |
SLC31A2 |
1318 |
SLC31A2 |
solute carrier family 31 member 2 [Source... |
TIFA |
92610 |
TIFA |
TRAF interacting protein with forkhead as... |
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Version history |
3.1: First introduced
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