STANDARD_NAME GSE18893_CTRL_VS_TNF_TREATED_TREG_24H_UP SYSTEMATIC_NAME M7299 COLLECTION C7:IMMUNESIGDB MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/GSE18893_CTRL_VS_TNF_TREATED_TREG_24H_UP NAMESPACE HUMAN_GENE_SYMBOL DESCRIPTION_BRIEF Genes up-regulated in T reg cells: 2h versus 24h medium treatment. DESCRIPTION_FULL Here we show that tumor necrosis factor (TNF) induced in human T-regulatory cells (Treg), as compared to conventional T cells (Tcon), a transcription program highly enriched for typical NF-κB target genes, such as: the cytokines LTA and TNF; the TNF-receptor super family members FAS, 4-1BB and OX-40; various anti-apoptotic genes; and other important immune-response genes. As an initial approach to examine the cellular program induced by TNF in Tregs versus Tcon cells, we employed microarray gene expression analysis at 2 and 24 hrs following TNF treatment. PMID 20181891 GEOID GSE18893 AUTHORS Nagar M,Jacob-Hirsch J,Vernitsky H,Berkun Y,Ben-Horin S,Amariglio N,Bank I,Kloog Y,Rechavi G,Goldstein I CONTRIBUTOR Jernej Godec CONTRIBUTOR_ORG Dana-Farber Cancer Institute EXACT_SOURCE GSE18893_1278_200_UP FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL SOURCE_MEMBERS ABCG1,ABHD10,ACVR2B,ADCY5,ADNP2,ADORA2A,ANP32E,AP3D1,AP3M1,ARF4,ARHGAP18,ARNTL2,ASB9,ATP13A3,BAZ1B,BCL10,C16orf86,C1orf43,C2CD4B,C7orf43,C7orf68,CA10,CA5B,CAMKK2,CAMKMT,CAMP,CARD10,CASQ1,CCDC109A,CCDC120,CCDC165,CD300A,CDH16,CDKN2AIPNL,CENPW,CEP19,CES1,COL4A2,COL6A3,CRISPLD1,CRISPLD2,CSTB,CWC25,DDC,DDR1,DHCR7,DHX29,DOC2B,DUSP16,DUSP5,EHD4,ELOVL6,EP400,EPHX1,EPOR,EREG,ESYT1,ETHE1,FAM101A,FAM110C,FAM113B,FAM117A,FAM129B,FAM156A,FAM160A1,FAM167A,FDFT1,FGD6,FOXM1,FRMPD3,FTSJD2,GCH1,GGT1,GLYCTK,GPR150,GYPC,GYS1,HBS1L,HDC,HGF,HLA-B,HMGA2,HN1L,HNRNPC,HOXA2,HRG,HYOU1,ID2,IDI1,IFIT1,IFT74,IL17B,IL18R1,INS,IP6K2,IRAK2,ITPK1,ITPRIPL2,KIAA0240,KIAA1109,KIAA1407,KRT36,KRT71,KRT72,LCE3B,LIMD2,LIMS2,LMO3,LPGAT1,MAPK1IP1L,MDM2,MED10,MFN2,MIXL1,MLX,MMEL1,MOCOS,MPZL2,MRPS12,MTERF,MYCBPAP,MYPOP,NDEL1,NDST1,NIPSNAP3A,NLRC3,NOXO1,OGDH,OLR1,OSMR,OXT,PAPPA2,PARP12,PATL2,PBK,PEX1,PNPO,PODN,PROK2,PSMB9,PTPRC,PXN,RABGEF1,RAF1,RAP2C,RFX5,RGS8,RHBDD3,ROPN1L,RPIA,RPRD1A,RTN4RL1,SAMD9L,SC5DL,SCFD2,SCHIP1,SCTR,SEC22C,SFXN2,SH3PXD2B,SIK1,SLC10A6,SLC13A2,SLC23A3,SLC25A28,SLC30A1,SLC7A4,SLFN12,SLFN12L,SNX27,SOCS4,SOHLH1,SPRY1,SPTBN2,SRXN1,SSR3,STAC3,STK4,STRN4,STYXL1,TBC1D10B,TBC1D2,TBP,TES,THADA,TMEM127,TMEM170B,TMEM86B,TMPRSS6,TNFRSF1A,TNKS2,TULP1,UBE2N,UCHL1,ZDHHC18,ZNF512B,ZNF628,ZNF823,ZSWIM5,ZW10 GENE_SYMBOLS ABCG1,ABHD10,ACVR2B,ADCY5,ADNP2,ADORA2A,ANP32E,AP3D1,AP3M1,ARF4,ARHGAP18,BMAL2,ASB9,ATP13A3,BAZ1B,BCL10,C16orf86,C1orf43,C2CD4B,TRAPPC14,HILPDA,CA10,CA5B,CAMKK2,CAMKMT,CAMP,CARD10,CASQ1,MCU,CCDC120,MTCL1,CD300A,CDH16,CDKN2AIPNL,CENPW,CEP19,CES1,COL4A2,COL6A3,CRISPLD1,CRISPLD2,CSTB,CWC25,DDC,DDR1,DHCR7,DHX29,DOC2B,DUSP16,DUSP5,EHD4,ELOVL6,EP400,EPHX1,EPOR,EREG,ESYT1,ETHE1,RFLNA,FAM110C,PCED1B,FAM117A,NIBAN2,FAM156A,FHIP1A,FAM167A,FDFT1,FGD6,FOXM1,FRMPD3,CMTR1,GCH1,GGT1,GLYCTK,GPR150,GYPC,GYS1,HBS1L,HDC,HGF,HLA-B,HMGA2,JPT2,HNRNPC,HOXA2,HRG,HYOU1,ID2,IDI1,IFIT1,IFT74,IL17B,IL18R1,INS,IP6K2,IRAK2,ITPK1,ITPRIPL2,BICRAL,BLTP1,CCDC191,KRT36,KRT71,KRT72,LCE3B,LIMD2,LIMS2,LMO3,LPGAT1,MAPK1IP1L,MDM2,MED10,MFN2,MIXL1,MLX,MMEL1,MOCOS,MPZL2,MRPS12,MTERF1,MYCBPAP,MYPOP,NDEL1,NDST1,NIPSNAP3A,NLRC3,NOXO1,OGDH,OLR1,OSMR,OXT,PAPPA2,PARP12,PATL2,PBK,PEX1,PNPO,PODN,PROK2,PSMB9,PTPRC,PXN,RABGEF1,RAF1,RAP2C,RFX5,RGS8,RHBDD3,ROPN1L,RPIA,RPRD1A,RTN4RL1,SAMD9L,SC5D,SCFD2,SCHIP1,SCTR,SEC22C,SFXN2,SH3PXD2B,SIK1,SLC10A6,SLC13A2,SLC23A3,SLC25A28,SLC30A1,SLC7A4,SLFN12,SLFN12L,SNX27,SOCS4,SOHLH1,SPRY1,SPTBN2,SRXN1,SSR3,STAC3,STK4,STRN4,STYXL1,TBC1D10B,TBC1D2,TBP,TES,THADA,TMEM127,TMEM170B,TMEM86B,TMPRSS6,TNFRSF1A,TNKS2,TULP1,UBE2N,UCHL1,ZDHHC18,ZNF512B,ZNF628,ZNF823,ZSWIM5,ZW10 FOUNDER_NAMES