STANDARD_NAME GSE42021_CD24HI_VS_CD24INT_TREG_THYMUS_DN SYSTEMATIC_NAME M9586 COLLECTION C7:IMMUNESIGDB MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/GSE42021_CD24HI_VS_CD24INT_TREG_THYMUS_DN NAMESPACE HUMAN_GENE_SYMBOL DESCRIPTION_BRIEF Genes down-regulated in thymic T reg: CD24 high [GeneID=100133941] versus CD24 int [GeneID=100133941]. DESCRIPTION_FULL We investigated at which stage of maturation commitment to a stable Foxp3-expressing phenotype takes place. We assessed stability of Foxp3 expression in thymic Foxp3+ Treg subsets of different maturity, defined by CD24 expression. Next we compared gene expression profiles of Foxp3+ Treg subsets (+) of different maturity (24lo, 24int, 24hi) and could identify a set of genes that were specifically up or downregulated in Foxp3+ Tregs, but not in Foxp3- conventional T cells, in a maturation-dependent manner. PMID 23420886 GEOID GSE42021 AUTHORS Toker A,Engelbert D,Garg G,Polansky JK,Floess S,Miyao T,Baron U,Düber S,Geffers R,Giehr P,Schallenberg S,Kretschmer K,Olek S,Walter J,Weiss S,Hori S,Hamann A,Huehn J CONTRIBUTOR Jernej Godec CONTRIBUTOR_ORG Dana-Farber Cancer Institute EXACT_SOURCE GSE42021_3787_200_DN FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL SOURCE_MEMBERS ADAP1,ADAR,APOL1,APOL2,APOL3,APOL6,ASPM,ATP10D,B2M,BACH1,BATF3,BCL2L13,BST2,BTN3A2,C10orf18,C19orf66,C1R,C1S,C3,C5orf15,CALCOCO2,CASP1,CASP7,CASP8,CBR3,CD38,CD47,CDC42EP4,CDK18,CFB,CFH,CNDP2,CTNNBL1,CTSL1,CTSS,CXCL2,DDX58,DDX60,DNPEP,DOCK4,DOPEY1,DRAM1,EMR1,ERAP1,EXT1,FADD,FAM111A,FAS,FLT3LG,FOSL2,FTSJD2,GBP1,GPATCH1,GPR18,GSTK1,GTPBP1,GUK1,HCP5,HERC5,HERC6,HIST1H2BO,HLA-A,HLA-B,HLA-C,HLA-E,HLA-F,HLA-G,HLA-J,HLA-K,IDO1,IFI16,IFI27,IFI30,IFI35,IFI44,IFI44L,IFI6,IFIH1,IFIT1,IFIT2,IFIT3,IFIT5,IFITM1,IFITM2,IGFBP3,IGFLR1,IL32,IL6ST,IRF1,IRF7,IRF8,IRF9,ISG15,ISG20,ITM2B,KDM6A,KIAA0226,LAMP3,LAP3,LEPROTL1,LGALS3BP,LMO2,LPIN2,LTBR,LY6E,MAX,MCL1,MX1,MX2,MYD88,NFE2L3,NFKBIA,NMI,NPC1,NUCB1,OAS1,OAS2,OAS3,OASL,OGFR,OPTN,P4HA1,PARP12,PARP3,PDGFRL,PHF11,PHF15,PJA1,PLAUR,PLSCR1,PML,POU5F1B,PPA1,PRKD2,PSMA4,PSMA6,PSMB10,PSMB3,PSMB8,PSMB9,PSME1,PSME2,RARRES3,RASGRP3,RBCK1,RBM7,RBMS1,RNF114,RNF19B,RPS6KA5,RTP4,SAMHD1,SECTM1,SEMA3F,SEPT4,SERPINB9,SERPING1,SLC15A3,SLC25A22,SLC25A28,SLC2A3,SP100,SP110,SPATS2L,SQRDL,ST8SIA4,STAT1,STAT3,TAP1,TAP2,TAPBP,TAPBPL,TCIRG1,TDRD7,TFG,TGM2,TLR3,TMEM140,TMEM62,TNFSF10,TRAFD1,TRANK1,TRIM14,TRIM21,TRIM22,TRIM25,TRIM31,TRIM38,TRIM5,TYMP,UBA7,UBE2L6,USO1,USP15,USP18,WARS,XPO6,ZFP36,ZNF22,ZNF710 GENE_SYMBOLS ADAP1,ADAR,APOL1,APOL2,APOL3,APOL6,ASPM,ATP10D,B2M,BACH1,BATF3,BCL2L13,BST2,BTN3A2,TASOR2,SHFL,C1R,C1S,C3,C5orf15,CALCOCO2,CASP1,CASP7,CASP8,CBR3,CD38,CD47,CDC42EP4,CDK18,CFB,CFH,CNDP2,CTNNBL1,CTSL,CTSS,CXCL2,RIGI,DDX60,DNPEP,DOCK4,DOP1A,DRAM1,ADGRE1,ERAP1,EXT1,FADD,FAM111A,FAS,FLT3LG,FOSL2,CMTR1,GBP1,GPATCH1,GPR18,GSTK1,GTPBP1,GUK1,HCP5,HERC5,HERC6,H2BC17,HLA-A,HLA-B,HLA-C,HLA-E,HLA-F,HLA-G,HLA-J,HLA-K,IDO1,IFI16,IFI27,IFI30,IFI35,IFI44,IFI44L,IFI6,IFIH1,IFIT1,IFIT2,IFIT3,IFIT5,IFITM1,IFITM2,IGFBP3,IGFLR1,IL32,IL6ST,IRF1,IRF7,IRF8,IRF9,ISG15,ISG20,ITM2B,KDM6A,RUBCN,LAMP3,LAP3,LEPROTL1,LGALS3BP,LMO2,LPIN2,LTBR,LY6E,MAX,MCL1,MX1,MX2,MYD88,NFE2L3,NFKBIA,NMI,NPC1,NUCB1,OAS1,OAS2,OAS3,OASL,OGFR,OPTN,P4HA1,PARP12,PARP3,PDGFRL,PHF11,JADE2,PJA1,PLAUR,PLSCR1,PML,POU5F1B,PPA1,PRKD2,PSMA4,PSMA6,PSMB10,PSMB3,PSMB8,PSMB9,PSME1,PSME2,PLAAT4,RASGRP3,RBCK1,RBM7,RBMS1,RNF114,RNF19B,RPS6KA5,RTP4,SAMHD1,SECTM1,SEMA3F,SEPTIN4,SERPINB9,SERPING1,SLC15A3,SLC25A22,SLC25A28,SLC2A3,SP100,SP110,SPATS2L,SQOR,ST8SIA4,STAT1,STAT3,TAP1,TAP2,TAPBP,TAPBPL,TCIRG1,TDRD7,TFG,TGM2,TLR3,TMEM140,TMEM62,TNFSF10,TRAFD1,TRANK1,TRIM14,TRIM21,TRIM22,TRIM25,TRIM31,TRIM38,TRIM5,TYMP,UBA7,UBE2L6,USO1,USP15,USP18,WARS1,XPO6,ZFP36,ZNF22,ZNF710 FOUNDER_NAMES