STANDARD_NAME GSE42021_CD24HI_VS_CD24LOW_TREG_THYMUS_UP SYSTEMATIC_NAME M9587 COLLECTION C7:IMMUNESIGDB MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/GSE42021_CD24HI_VS_CD24LOW_TREG_THYMUS_UP NAMESPACE HUMAN_GENE_SYMBOL DESCRIPTION_BRIEF Genes up-regulated in thymic T reg: CD24 high [GeneID=100133941] versus CD24 low [GeneID=100133941]. DESCRIPTION_FULL We investigated at which stage of maturation commitment to a stable Foxp3-expressing phenotype takes place. We assessed stability of Foxp3 expression in thymic Foxp3+ Treg subsets of different maturity, defined by CD24 expression. Next we compared gene expression profiles of Foxp3+ Treg subsets (+) of different maturity (24lo, 24int, 24hi) and could identify a set of genes that were specifically up or downregulated in Foxp3+ Tregs, but not in Foxp3- conventional T cells, in a maturation-dependent manner. PMID 23420886 GEOID GSE42021 AUTHORS Toker A,Engelbert D,Garg G,Polansky JK,Floess S,Miyao T,Baron U,Düber S,Geffers R,Giehr P,Schallenberg S,Kretschmer K,Olek S,Walter J,Weiss S,Hori S,Hamann A,Huehn J CONTRIBUTOR Jernej Godec CONTRIBUTOR_ORG Dana-Farber Cancer Institute EXACT_SOURCE GSE42021_3788_200_UP FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL SOURCE_MEMBERS ACACA,ALDH3B1,AMBRA1,ANKMY2,APPL2,ARCN1,ARHGAP24,ARL6IP5,ATF7IP2,ATP6AP1,ATP6V1B1,ATP7B,BAG2,BAG5,BAMBI,BEND5,BHLHE40,BMP7,C12orf29,C1QB,C3orf18,C6orf120,CALU,CAMSAP1L1,CAMTA1,CAPN10,CCDC103,CCNB1IP1,CCNE1,CCR5,CD14,CD302,CDC25C,CDC45,CDKN2AIP,CHML,CHMP4A,CLCA1,CTCF,CXCR5,CXorf48,DDX27,DDX42,DGCR14,DNAJB12,DNAJC2,DYNC1LI1,EMP3,EPB41,EPN2,ERMAP,EXOSC2,F2,FAM136A,FAM171A1,FAM46C,FASTKD2,FEN1,FLT3LG,FOXC2,FP588,GALR3,GBX2,GLCE,GMPPB,GNAI2,GSPT2,HEMK1,HMGB3P30,HNF1B,HNRNPA0,HOMER2,HOXA1,HPS5,IKZF3,IL11RA,IMP3,IQSEC1,ISG20L2,ISL1,ITIH3,KANK2,KCNC4,KHDRBS3,KHSRP,KIAA0232,KIF3B,KLRF1,KRT20,LEPREL4,LOC100291860,LRRC19,LYRM4,MAOB,MAU2,MEAF6,MEGF9,MKL2,MLYCD,MRAS,MRC1,MRPL34,MXRA5,MXRA7,MYCNOS,MYOT,NACC2,NAV3,NBPF10,NCAPH,NDRG4,NDUFA1,NDUFAF4,NDUFB5,NEO1,NGLY1,NKX2-5,NUDT3,NUP50,ODC1,OPRL1,OR10C1,OR7E47P,OXR1,PHTF1,PIN1,PIP4K2B,PMPCA,PNMA1,POFUT1,POLR3D,POLR3K,PPPDE1,PRICKLE3,PSMD6,PTGIR,PTPN22,PYY,QTRT1,RAD50,RAD51L3,RALGDS,REPIN1,RMND1,RNF139,S100A8,SDCCAG3,SEC22A,SELRC1,SLC25A36,SLC35A2,SLC4A1AP,SLC5A12,SLC7A11,SMOX,SMYD5,SNRPF,SPATA2L,SQLE,STARD3,TASP1,TBC1D1,TBC1D17,TBC1D2B,TCAP,TERF2,TFE3,THNSL1,THOC1,TIMM8A,TMEM106C,TMEM121,TMLHE,TNFAIP2,TNP2,TP73,TSN,TST,TUT1,UBN1,UBR7,UBTF,UMPS,URB2,USP1,USP46,UTP14A,WDR12,WDR41,WRB,WWC1,YLPM1,ZBED5,ZNF131,ZNF239,ZNF24,ZNF318,ZNF37BP,ZNF638,ZNF84 GENE_SYMBOLS ACACA,ALDH3B1,AMBRA1,ANKMY2,APPL2,ARCN1,ARHGAP24,ARL6IP5,ATF7IP2,ATP6AP1,ATP6V1B1,ATP7B,BAG2,BAG5,BAMBI,BEND5,BHLHE40,BMP7,C12orf29,C1QB,C3orf18,C6orf120,CALU,CAMSAP2,CAMTA1,CAPN10,CCDC103,CCNB1IP1,CCNE1,CCR5,CD14,CD302,CDC25C,CDC45,CDKN2AIP,CHML,CHMP4A,CLCA1,CTCF,CXCR5,CT55,DDX27,DDX42,ESS2,DNAJB12,DNAJC2,DYNC1LI1,EMP3,EPB41,EPN2,ERMAP,EXOSC2,F2,FAM136A,FAM171A1,TENT5C,FASTKD2,FEN1,FLT3LG,FOXC2,TMEM8B,GALR3,GBX2,GLCE,GMPPB,GNAI2,GSPT2,HEMK1,HMGB3P30,HNF1B,HNRNPA0,HOMER2,HOXA1,HPS5,IKZF3,IL11RA,IMP3,IQSEC1,ISG20L2,ISL1,ITIH3,KANK2,KCNC4,KHDRBS3,KHSRP,KIAA0232,KIF3B,KLRF1,KRT20,P3H4,,LRRC19,LYRM4,MAOB,MAU2,MEAF6,MEGF9,MRTFB,MLYCD,MRAS,MRC1,MRPL34,MXRA5,MXRA7,MYCNOS,MYOT,NACC2,NAV3,NBPF10,NCAPH,NDRG4,NDUFA1,NDUFAF4,NDUFB5,NEO1,NGLY1,NKX2-5,NUDT3,NUP50,ODC1,OPRL1,OR10C1,OR7E47P,OXR1,PHTF1,PIN1,PIP4K2B,PMPCA,PNMA1,POFUT1,POLR3D,POLR3K,DESI2,PRICKLE3,PSMD6,PTGIR,PTPN22,PYY,QTRT1,RAD50,RAD51D,RALGDS,REPIN1,RMND1,RNF139,S100A8,ENTR1,SEC22A,COA7,SLC25A36,SLC35A2,SLC4A1AP,SLC5A12,SLC7A11,SMOX,SMYD5,SNRPF,SPATA2L,SQLE,STARD3,TASP1,TBC1D1,TBC1D17,TBC1D2B,TCAP,TERF2,TFE3,THNSL1,THOC1,TIMM8A,TMEM106C,TMEM121,TMLHE,TNFAIP2,TNP2,TP73,TSN,TST,TUT1,UBN1,UBR7,UBTF,UMPS,URB2,USP1,USP46,UTP14A,WDR12,WDR41,GET1,WWC1,YLPM1,ZBED5,ZNF131,ZNF239,ZNF24,ZNF318,ZNF37BP,ZNF638,ZNF84 FOUNDER_NAMES