STANDARD_NAME GSE9650_EFFECTOR_VS_EXHAUSTED_CD8_TCELL_UP SYSTEMATIC_NAME M5833 COLLECTION C7:IMMUNESIGDB MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/GSE9650_EFFECTOR_VS_EXHAUSTED_CD8_TCELL_UP NAMESPACE HUMAN_GENE_SYMBOL DESCRIPTION_BRIEF Genes up-regulated in comparison of effector CD8 T cells versus exhausted CD8 T cells. DESCRIPTION_FULL CD8 T cells normally differentiate from resting naïve T cells into function effector and then memory CD8 T cells following acute infections. During chronic viral infections, however, virus-specific CD8 T cells often become exhausted. We used microarrays to examine the gene expression differences between naive, effector, memory and exhausted virus-specific CD8 T cells following lymphocytic choriomeningitis virus infection. PMID 17950003 GEOID GSE9650 AUTHORS Wherry EJ,Ha SJ,Kaech SM,Haining WN,Sarkar S,Kalia V,Subramaniam S,Blattman JN,Barber DL,Ahmed R CONTRIBUTOR Jernej Godec CONTRIBUTOR_ORG Dana-Farber Cancer Institute EXACT_SOURCE GSE9650_1256_200_UP FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL SOURCE_MEMBERS ABCA2,ACP5,AK3,ANAPC16,ANAPC5,ANXA1,ANXA6,AP1M1,ARFRP1,ARL4C,ATP5O,ATP6V0B,ATP6V0C,AURKAIP1,AXIN1,B4GALT1,BCKDK,BLVRA,BNIP3L,BRAP,BSCL2,C11orf31,C11orf73,C17orf37,C18orf8,C2orf43,C3orf37,C4orf52,C7orf59,C8orf33,C9orf23,CAB39L,CALU,CCNDBP1,CCR2,CDC37,CDKN2D,CHFR,CIB1,CMAS,CMTM7,COMMD7,CORO1B,CPT2,CSRP3,CTSA,CTSD,DAP,DBI,DCPS,DCTN5,DDX41,DEAF1,DGKA,DHRS1,DNAJB1,DNM1,DPEP1,DPM2,DUS1L,DYM,EBNA1BP2,EFTUD2,EIF2B4,EIF2B5,EIF2S1,EIF3B,EIF3L,EIF4A3,EIF6,ELAVL1,ENTPD4,ETS1,FAM117A,FAM89B,FCGR2B,FEZ2,FGFR3,FHL2,GCAT,GDAP2,GIT1,GLIPR2,GOLM1,GPC1,GRAMD3,GSTT2,H2AFY,HADHB,HBXIP,HCLS1,HERPUD1,HIPK1,HNRNPAB,HSD11B1,ICAM2,IFITM10,IL17RA,IL18RAP,ISYNA1,ITGAL,ITGAX,ITGB7,JKAMP,KCNJ8,KIAA1274,KIAA2013,KLK8,KLRC1,KLRD1,KLRG1,KLRK1,LEF1,LGALS9B,LRWD1,LSM1,LSM4,LY6H,LYSMD1,MBP,MFNG,MKNK2,MLX,MRPL34,MTCH1,MTMR1,MTSS1L,NDUFB6,NSMCE1,ORC5,PCGF5,PDIA6,PHTF1,PIK3CD,PIM2,PKP3,PLAC8,PLD3,PNPO,PPIB,PPIF,PQLC1,PRIM2,PRKAG1,PRKCH,PRPSAP1,PSMB2,PSMB3,PSMD13,PTPN6,PTTG1,RABGGTA,RACGAP1,RAD17,REPS1,RNF14,RNF167,RNPS1,RORA,RPN1,RPS6KA4,RSU1,SATB1,SCP2,SEMA4A,SEPT6,SETD6,SLC1A5,SMPD1,SNX1,SRP68,SRPK1,SSNA1,ST13,STK38,SWAP70,TBCB,TIAM1,TIMM44,TMC6,TMEM147,TMEM208,TMEM223,TMEM45A,TSPAN31,TUBA3C,TWF2,TXNL4A,UBE2H,UBE2Z,UBQLN1,USP22,USP5,VAV1,WARS,WTAP,XPNPEP1,YIPF3,ZFYVE19,ZIK1 GENE_SYMBOLS ABCA2,ACP5,AK3,ANAPC16,ANAPC5,ANXA1,ANXA6,AP1M1,ARFRP1,ARL4C,ATP5PO,ATP6V0B,ATP6V0C,AURKAIP1,AXIN1,B4GALT1,BCKDK,BLVRA,BNIP3L,BRAP,BSCL2,SELENOH,HIKESHI,MIEN1,RMC1,LDAH,HMCES,SMIM20,LAMTOR4,C8orf33,RPP25L,CAB39L,CALU,CCNDBP1,CCR2,CDC37,CDKN2D,CHFR,CIB1,CMAS,CMTM7,COMMD7,CORO1B,CPT2,CSRP3,CTSA,CTSD,DAP,DBI,DCPS,DCTN5,DDX41,DEAF1,DGKA,DHRS1,DNAJB1,DNM1,DPEP1,DPM2,DUS1L,DYM,EBNA1BP2,EFTUD2,EIF2B4,EIF2B5,EIF2S1,EIF3B,EIF3L,EIF4A3,EIF6,ELAVL1,ENTPD4,ETS1,FAM117A,FAM89B,FCGR2B,FEZ2,FGFR3,FHL2,GCAT,GDAP2,GIT1,GLIPR2,GOLM1,GPC1,GRAMD2B,GSTT2,MACROH2A1,HADHB,LAMTOR5,HCLS1,HERPUD1,HIPK1,HNRNPAB,HSD11B1,ICAM2,IFITM10,IL17RA,IL18RAP,ISYNA1,ITGAL,ITGAX,ITGB7,JKAMP,KCNJ8,PALD1,KIAA2013,KLK8,KLRC1,KLRD1,KLRG1,KLRK1,LEF1,LGALS9B,LRWD1,LSM1,LSM4,LY6H,LYSMD1,MBP,MFNG,MKNK2,MLX,MRPL34,MTCH1,MTMR1,MTSS2,NDUFB6,NSMCE1,ORC5,PCGF5,PDIA6,PHTF1,PIK3CD,PIM2,PKP3,PLAC8,PLD3,PNPO,PPIB,PPIF,SLC66A2,PRIM2,PRKAG1,PRKCH,PRPSAP1,PSMB2,PSMB3,PSMD13,PTPN6,PTTG1,RABGGTA,RACGAP1,RAD17,REPS1,RNF14,RNF167,RNPS1,RORA,RPN1,RPS6KA4,RSU1,SATB1,SCP2,SEMA4A,SEPTIN6,SETD6,SLC1A5,SMPD1,SNX1,SRP68,SRPK1,SSNA1,ST13,STK38,SWAP70,TBCB,TIAM1,TIMM44,TMC6,TMEM147,TMEM208,TMEM223,TMEM45A,TSPAN31,TUBA3C,TWF2,TXNL4A,UBE2H,UBE2Z,UBQLN1,USP22,USP5,VAV1,WARS1,WTAP,XPNPEP1,YIPF3,ZFYVE19,ZIK1 FOUNDER_NAMES