STANDARD_NAME ESC_J1_UP_EARLY.V1_DN SYSTEMATIC_NAME M2763 COLLECTION C6 MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/ESC_J1_UP_EARLY.V1_DN NAMESPACE HUMAN_GENE_SYMBOL DESCRIPTION_BRIEF Genes down-regulated during early stages of differentiation of embryoid bodies from J1 embryonic stem cells. DESCRIPTION_FULL An 11-point time course study on differentiating embryoid bodies from a murine J1 embryonic stem cell line. The time course includes 0 hr, 6 hr, 12 hr, 18 hr, 24 hr, 36 hr, 48 hr, 4 days, 7 days, 9 days and 14 days. PMID 17394647 GEOID GSE3749 AUTHORS Hailesellasse Sene K,Porter CJ,Palidwor G,Perez-Iratxeta C,Muro EM,Campbell PA,Rudnicki MA,Andrade-Navarro MA CONTRIBUTOR Pablo Tamayo CONTRIBUTOR_ORG Broad Institute EXACT_SOURCE Early (12, 18 and 24 h) vs control; bottom 200 genes (diff. of means) FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL SOURCE_MEMBERS 1190005I06Rik,1190005P17Rik,1500003O22Rik,1500031M22Rik,1700029I01Rik /// LO,1810055G02Rik,2010001M06Rik,2410002F23Rik,2900062L11Rik,3300001P08Rik,4833420G11Rik,4933428G09Rik,9030208C03Rik,9130019O22Rik /// E4,AA408556,AA516738,ACTA1,ADAM23,AMAC1,AMH,ANGPTL4,ANXA1,ANXA3,ANXA5,AP4M1,APOB48R,ARHGEF10L,ATF5,ATP9B,B230354K17Rik,B3GALT6,BAG5,BC002059,BCL3,BMP1,BMP4,BMS1L,BRWD1,C030004A17Rik,C76132,C78541,CAR7,CCDC59,CEBPD,CENPB,CENTA2,CIRBP,CNN1,CNO,CRYL1,CTRB1,CYR61,DAPP1,DBR1,DCLRE1B,DPYSL5,DRD4,DUSP6,DYSF /// FER1L3,E030041M21Rik,E130012A19Rik,EDN1,EGR1,EMP2,ENTPD4,ERAS,ERF,ETV4,FBXO33,FETUB,FGF17,FGF18,FKBPL,FOXD3,G6PD2,GAP43,GBP1,GBP2,GBX2,GNA14,GPATC4,GRLF1,GSG2,GSPT2,GTPBP5,HDGFRP3,HIST1H2BC,HYAL2,ID1,ID3,IGFBP3,INHBB,INS1,JUNB,KIAA0859,KLF1,KLF13,KLF4,KRT1-19,KRT2-8,KTI12,LALBA,LAMA1,LAMC2,LGALS6,LIMS2,LOC434261 /// LOC675,LOC435970 /// LOC668,LOC640441,LOC673890,LOH11CR2A,LPP,LTB,MAD1L1,MAPK7,MAPT,MCPT2,MDN1,MED6,MKI67IP,MRAS,MRPS11,MVK,MYC,MYL9,NAB2,NAPSA,NINJ2,NSUN4,NUDT11,PAFAH2,PHB,PPCS,PPP1R1A,PPP2R3A,PQLC2,PTGIS,PTPN22,QSER1,RAB33A,RAMP1,RECQL,REEP6,RELB,REM2,RHOX6,RIOK2,RNASE4,RNASEL,RPL3 /// LOC242809 /,RPP25,RPS6KB2,SAP30BP,SERPINE1,SFN,SLC16A2,SLC30A1,SOCS3,SPRY4,STAT3,STK4,SYT12,TAGLN,TCF15,TFEB,TGM1,TGM3,THBS1 /// LOC640441,TIAF2,TLE4,TLR9,TMC6,TMEM121,TMEM98,TNFRSF12A,TRAIP,TREM2,TREX1,TRIB3,Trpd52l3,TRPS1,TSPYL4,TUBB2A /// TUBB2B //,UBE1L,UBE2J1,USP38,UXT,VAX2,VPS33B,WBSCR18,WSB1,ZBP1,ZCSL3,Zfp295,ZFP36,ZFP36L1,ZFP423,ZFP553,ZFP57,ZNF35 GENE_SYMBOLS C16orf74,LLPH,RRP8,DIMT1,,C11orf24,,C19orf48P,,LUC7L3,GID8,PACRGL,CORO2A,,RRP12,,ACTA1,ADAM23,SLC35G3,AMH,ANGPTL4,ANXA1,ANXA3,ANXA5,AP4M1,APOBR,ARHGEF10L,ATF5,ATP9B,,B3GALT6,BAG5,,BCL3,BMP1,BMP4,BMS1,BRWD1,FAM118B,,NOL12,,CCDC59,CEBPD,CENPB,ADAP2,CIRBP,CNN1,BLOC1S4,CRYL1,CTRB1,CCN1,DAPP1,DBR1,DCLRE1B,DPYSL5,DRD4,DUSP6,,BLTP3B,EPOP,EDN1,EGR1,EMP2,ENTPD4,ERAS,ERF,ETV4,FBXO33,FETUB,FGF17,FGF18,FKBPL,FOXD3,,GAP43,GBP1,GBP2,GBX2,GNA14,GPATCH4,ARHGAP35,HASPIN,GSPT2,MTG2,,H2BC4,HYAL2,ID1,ID3,IGFBP3,INHBB,,JUNB,METTL13,KLF1,KLF13,KLF4,,,KTI12,LALBA,LAMA1,LAMC2,,LIMS2,,,,,VWA5A,LPP,LTB,MAD1L1,MAPK7,MAPT,,MDN1,MED6,NIFK,MRAS,MRPS11,MVK,MYC,MYL9,NAB2,NAPSA,NINJ2,NSUN4,NUDT11,PAFAH2,PHB1,PPCS,PPP1R1A,PPP2R3A,SLC66A1,PTGIS,PTPN22,QSER1,RAB33A,RAMP1,RECQL,REEP6,RELB,REM2,,RIOK2,RNASE4,RNASEL,,RPP25,RPS6KB2,SAP30BP,SERPINE1,SFN,SLC16A2,SLC30A1,SOCS3,SPRY4,STAT3,STK4,SYT12,TAGLN,TCF15,TFEB,TGM1,TGM3,,,TLE4,TLR9,TMC6,TMEM121,TMEM98,TNFRSF12A,TRAIP,TREM2,TREX1,TRIB3,TRPS1,TSPYL4,,TPD52L3,UBA7,UBE2J1,USP38,UXT,VAX2,VPS33B,DNAJC30,WSB1,ZBP1,DNAJC24,ZFP36,ZFP36L1,,,ZFP57,ZNF35,ZBTB21 FOUNDER_NAMES