STANDARD_NAME ESC_V6.5_UP_LATE.V1_DN SYSTEMATIC_NAME M2771 COLLECTION C6 MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/ESC_V6.5_UP_LATE.V1_DN NAMESPACE HUMAN_GENE_SYMBOL DESCRIPTION_BRIEF Genes down-regulated during late stages of differentiation of embryoid bodies from V6.5 embryonic stem cells. DESCRIPTION_FULL An 11-point time course study comparing V6.5 embryonic stem cells versus embryoid bodies. Time course 0 hours, 6 hours, 12 hours, 18 hours, 24 hours, 36 hours, 48 hours, 4 days, 7 days, 9 days, and 14 days. PMID 17394647 GEOID GSE3231 AUTHORS Hailesellasse Sene K,Porter CJ,Palidwor G,Perez-Iratxeta C,Muro EM,Campbell PA,Rudnicki MA,Andrade-Navarro MA CONTRIBUTOR Pablo Tamayo CONTRIBUTOR_ORG Broad Institute EXACT_SOURCE Late (4, 7 and 9 days) vs control; bottom 200 genes (diff. of means) FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL SOURCE_MEMBERS 0610033I05Rik,1190005F20Rik,1190005I06Rik,1500031M22Rik,1700040I03Rik,1810054D07Rik,1810055G02Rik,2210409E12Rik,2410002F23Rik,2410005H09Rik,2410081M15Rik,2510005D08Rik,2810421I24Rik,3100002L24Rik /// 92,5730593N15Rik,5830433M19Rik,8430410A17Rik,A030007L17Rik,AA408556,ABCA2,ACACB,ACOT8,ACTN3,ADA,ANGPTL4,ANXA1,AOAH,AP4M1,ARMC6,ATF1,AU021092,AVPI1,B230112C05Rik,BC016423,BCL3,BDH1,BGN,BID,BIRC6,BNIPL,BRP44L,BSCL2,C76472,C78541,CALML4,CBR3,CBX7,CD38,CHAC1,CLTB,CRMP1,CTH,CYCT,D11BWG0434E,D1PAS1,DAPP1,DBR1,DCLRE1B,DDX4,DDX51,DEDD2,DPPA2,DYRK3,E130012A19Rik,E2F8,E430028B21Rik,ECH1,EMP1,ERAS,ESRRB,ETV4,EXOSC1,FBLN2,FBXO15,FGF17,FOXD3,FTSJ3,FZD5,GADD45A,GBX2,GDF3,GIMAP3P,GJB3,GJB5,GLI1,GLI2,GM288,GPA33,GPATC4,GPX2,GTPBP5,GYS1,HADHB,HES7,ICAM1,INHBA,INHBB,ITGB7,IXL,JAM2,KCNA1,KIF18A,KLF4,KLK10,KRT1-17,LAPTM5 /// LOC669058,LCK,LGALS3,LOC435970 /// LOC668,LOC671598,LOX,MANBA,MDN1,MGC117846,MGP,MORC1,MRAS,MSC,MSRB2,MYC,MYST4,NEFH,NEFL,NPHS1,NR0B1,NUPR1,OLIG2,PCAF,PCOLCE,PCOLCE2,PDGFC,PDSS1,PGEA1,PHB,PLA2G1B,PLEKHA4,PLK3,POLA1,PRCC,PRODH /// LOC671160,PRX,PSMA8,PTCD1,PTRF,QTRTD1,RASGRP2,RASIP1,RCP9,RIOK2,RNU3IP2,RPL3 /// LOC242809 /,RPP25,S100A4,S100A6,SEMA4B,SEPT1,SERPINE1,SFN,SGK,SIP1,SLC27A2,SMPDL3B,SOCS3,SPP1,SPRY4,SPTBN4,SULT4A1,TAF1C,TCEA3,TCF15,TEX14,TEX19,TFEB,TGM1,TIMP1,TLE4,TM4SF1,TMEM79,TRIB3,TTYH2,TUBB2A /// TUBB2B //,TUBB3,UFM1,VAC14,WDR46,WDR75,ZBTB32,ZC3H8,ZCCHC10,ZFP1,ZFP110,Zfp295,ZFP42,ZFP423,ZFP499,ZFP566,ZFP57,ZFP71-RS1,ZFP97 /// BC018101,ZMYM3 GENE_SYMBOLS RBM43,TRMT1L,C16orf74,DIMT1,PRADC1,TTC39B,C11orf24,,C19orf48P,ZNF428,ZBTB8A,EEF1AKMT1,FASTKD2,,NOTUM,CAAP1,HMCES,GGCT,RRP12,ABCA2,ACACB,ACOT8,ACTN3,ADA,ANGPTL4,ANXA1,AOAH,AP4M1,ARMC6,ATF1,C16orf89,AVPI1,FAM169A,TASOR2,BCL3,BDH1,BGN,BID,BIRC6,BNIPL,MPC1,BSCL2,,NOL12,CALML4,CBR3,CBX7,CD38,CHAC1,CLTB,CRMP1,CTH,,,,DAPP1,DBR1,DCLRE1B,DDX4,DDX51,DEDD2,DPPA2,DYRK3,EPOP,E2F8,PDE12,ECH1,EMP1,ERAS,ESRRB,ETV4,EXOSC1,FBLN2,FBXO15,FGF17,FOXD3,FTSJ3,FZD5,GADD45A,GBX2,GDF3,GIMAP3P,GJB3,GJB5,GLI1,GLI2,,GPA33,GPATCH4,GPX2,MTG2,GYS1,HADHB,HES7,ICAM1,INHBA,INHBB,ITGB7,MED29,JAM2,KCNA1,KIF18A,KLF4,KLK10,,,LCK,LGALS3,,,LOX,MANBA,MDN1,ZNF616,MGP,MORC1,MRAS,MSC,MSRB2,MYC,KAT6B,NEFH,NEFL,NPHS1,NR0B1,NUPR1,OLIG2,KAT2B,PCOLCE,PCOLCE2,PDGFC,PDSS1,CBY1,PHB1,PLA2G1B,PLEKHA4,PLK3,POLA1,PRCC,,PRX,PSMA8,PTCD1,CAVIN1,QTRT2,RASGRP2,RASIP1,CRCP,RIOK2,RRP9,,RPP25,S100A4,S100A6,SEMA4B,SEPTIN1,SERPINE1,SFN,SGK1,GEMIN2,SLC27A2,SMPDL3B,SOCS3,SPP1,SPRY4,SPTBN4,SULT4A1,TAF1C,TCEA3,TCF15,TEX14,TEX19,TFEB,TGM1,TIMP1,TLE4,TM4SF1,TMEM79,TRIB3,TTYH2,,TUBB3,UFM1,VAC14,WDR46,WDR75,ZBTB32,ZC3H8,ZCCHC10,ZFP1,,ZFP42,,,,ZFP57,,,ZMYM3,ZBTB21 FOUNDER_NAMES