STANDARD_NAME GOBP_DNA_METABOLIC_PROCESS SYSTEMATIC_NAME M17815 COLLECTION C5:GO:BP MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/GOBP_DNA_METABOLIC_PROCESS NAMESPACE Human_NCBI_Gene_ID DESCRIPTION_BRIEF Any cellular metabolic process involving deoxyribonucleic acid. This is one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides. [ISBN:0198506732] DESCRIPTION_FULL PMID GEOID AUTHORS CONTRIBUTOR Gene Ontology CONTRIBUTOR_ORG Gene Ontology Consortium EXACT_SOURCE GO:0006259 FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL http://amigo.geneontology.org/amigo/term/GO:0006259 SOURCE_MEMBERS 100128977,100133315,100134934,10036,10038,10039,10040,100507650,100616101,10075,100862688,10097,10111,10155,1017,10189,101928601,101929977,10213,1022,1025,1026,10269,102724560,10273,10293,1032,10361,10419,10445,10459,10463,10474,10498,10519,10524,10535,10538,1054,10574,10575,10576,10629,1063,10635,10664,1068,1069,10694,10714,10715,10721,10728,10856,10891,10902,10919,10923,10926,10930,10933,10973,11044,11073,11077,1108,11105,1111,11124,11143,11144,11169,11176,11177,11198,11200,11201,11219,11232,112441434,11277,11284,112869,113130,11315,113510,1137,114799,114821,1149,115004,116028,1161,116138,116447,117143,118460,119392,121260,121642,122618,1235,124739,124751,124817,125150,125476,126074,126549,132243,133746,135458,140564,140609,1408,142,143,144455,144715,1454,145645,146956,147872,1490,149840,1499,150,150275,150684,151636,151987,152485,154288,1545,157570,157777,158401,158880,1602,163859,164045,1642,1643,164668,1647,1653,165918,1660,1663,167227,1676,1677,170506,1736,1763,1773,1774,1775,1776,1777,1786,1788,1789,1791,1854,1877,1950,1956,196528,197342,197370,199720,199990,200315,200316,200424,200558,201163,201254,201516,201973,2021,2067,2068,2069,207,2070,2071,2072,2073,2074,2138,2139,2140,2146,2175,2176,2177,2178,2185,2187,2188,2189,219736,220064,221120,222229,2237,2247,2255,225689,2264,2271,22890,22891,22897,22909,22944,22948,22976,22992,23028,23047,23049,2305,23063,23064,23075,23126,23137,23175,23198,23201,23244,23293,23304,2332,23326,23338,23347,23376,23381,23405,23411,23450,23503,23514,23529,2353,23560,23583,23594,23595,23613,23626,23646,23649,24144,245711,246243,25,2521,252969,253461,253714,254225,254394,254528,2547,256006,257218,25788,25792,25836,25840,25842,25849,25865,25898,25900,25913,259282,25939,25942,25970,25988,25996,26057,26073,26122,26168,2625,26270,26271,26272,26277,26354,2648,2658,26585,2671,27000,27030,27063,27097,27154,27301,27339,27343,2735,27350,2736,27434,27443,283129,283677,283847,283899,284071,284131,285051,285498,286053,286257,286826,28984,29072,29086,29089,29104,29117,29128,2956,2965,2966,2967,2968,29803,29844,29893,29935,29947,29974,29980,29997,30009,3001,3005,3006,3007,3008,3009,3010,3014,3024,306,3060,3070,3082,3104,3146,3148,3149,3150,3159,317,317761,3178,3181,3182,3183,3184,3192,328,3297,3320,3326,3329,3364,339,339221,339834,3399,341567,345643,346673,3480,348654,353497,3558,3565,3569,3575,3586,359787,3669,373861,374393,375748,375757,3776,378708,3835,3836,3838,387893,388649,389643,389898,3978,3980,3981,399687,400410,400629,4015,404672,406938,407006,407021,407024,407026,4142,4152,4157,4171,4172,4173,4174,4175,4176,4204,4216,4221,4255,4287,4292,4297,4331,4350,4358,4361,441161,4436,4437,4438,4439,449619,4521,4552,4595,4609,466,4673,4678,4683,472,4751,4772,4774,4781,4782,4784,4796,4798,4830,4841,4862,4869,4880,4907,4913,4931,493861,4968,4998,4999,5000,5001,50484,50485,50507,5073,5080,50943,51008,51010,51022,51053,5111,51111,51147,51149,51176,51341,51343,51347,51366,51368,51377,51409,51412,51426,51444,51455,51507,51514,5154,51542,51547,51548,5155,51550,51567,51588,5159,51659,51720,51742,51750,5245,53615,5371,5378,5379,5383,5387,5394,5395,54069,54107,54108,5422,5423,5424,5425,5426,5427,5428,5429,5438,54386,5442,54433,54464,54465,545,54512,54537,54552,54556,546,54617,54726,54737,54778,54780,54784,54790,54799,54815,54826,54840,548593,54891,54921,54929,54936,54962,54969,54984,55010,55031,55063,55086,55120,55135,5514,5515,55159,55170,5518,55183,55193,55215,55218,55226,55247,55257,55270,55274,55284,55294,5531,55317,55339,55345,5536,55388,55505,55512,5557,55578,5558,55611,55651,55693,5570,55704,55719,55728,55729,55732,55775,5580,5582,55869,5588,55904,5591,55929,5594,5595,5609,56154,56158,56159,56160,56252,56647,56652,56655,56776,56852,56893,56897,56907,56915,56916,56941,56943,56946,56949,56953,56970,56979,571,57103,57109,57223,57332,57379,57418,57492,57523,57551,57599,5763,57634,57646,57654,57662,57673,57695,57697,57804,57820,5788,580,581,5810,5813,58493,58511,58525,5883,5884,5885,5886,5887,5888,5889,5890,5892,5893,5896,5897,5901,5926,5928,5930,5931,5932,5937,5965,5976,5977,5980,5981,5982,5983,5984,5985,60,6018,604,60489,605,6117,6118,6119,6188,619465,6240,6241,6282,6314,63901,63922,63967,63978,63979,64006,64061,64094,641,64110,6416,6418,6419,6421,64210,642636,64282,64318,64332,644186,64421,64710,647309,64769,64782,64785,64789,648,64802,64855,64858,64859,64863,64919,65057,65123,659,6595,6596,6597,6598,6599,6601,6602,6603,6604,6605,6672,668,6714,672,6742,6749,675,6778,6830,6832,6847,6873,6874,6877,6878,6879,6880,6881,6883,6929,6934,6944,6950,6996,7011,7012,7013,7014,7015,7027,7037,7040,7083,7084,7124,7126,7141,7150,7153,7155,7156,7157,7158,7161,7203,7247,7270,728340,7291,7292,729453,7298,730394,7319,7320,7323,7334,7335,7336,7341,7349,7374,7398,7405,7415,7454,7468,7486,7490,7507,7508,7515,7516,7517,7518,7520,7528,7555,7737,7832,7874,78990,78995,78996,79000,79008,79035,79068,79075,79077,7913,79173,79184,79447,79596,79605,79618,79621,79661,79677,79703,79725,79728,79733,79736,79759,79813,79840,79892,79913,79915,79960,79977,79991,80010,80119,80124,80169,80174,80198,80233,80311,80312,80314,80351,80762,80820,8089,8091,8099,8110,81602,81620,8193,8208,8239,8243,8289,8295,8313,8317,8318,8320,83443,83444,83666,83667,83695,83743,83932,83933,83940,83990,84057,84083,84101,8412,84126,84142,84153,84164,84250,84289,84296,84309,8438,84444,84464,8450,84501,8451,84515,84542,8458,8464,8467,84690,84717,84787,84875,84893,84897,8493,84939,84954,85015,8505,85456,8550,8555,86,8607,8658,8741,875,8815,8846,8850,8870,8877,8882,890,8914,8924,8930,8932,8940,8971,898,9025,90381,90529,908,90853,9093,9100,9104,9112,9126,9131,9134,91419,91442,9149,9156,91603,91607,91875,9212,9219,9232,92345,92667,92675,9274,9275,92797,92815,9314,9319,9320,9361,93624,9370,93953,93973,94,940,9400,9401,9466,9555,9557,9577,958,9582,959,9643,9656,9665,9730,9760,9767,9768,983,9837,988,9894,990,9907,9913,9937,9941,9960,997,9978,9984,9985 GENE_SYMBOLS MAPT-AS1,XNDC1N,TEN1,CHAF1A,PARP2,PARP3,TOM1L1,RNF212B,,HUWE1,,ACTR2,RAD50,TRIM28,CDK2,ALYREF,MEI4,MARCHF6-DT,PSMD14,CDK7,CDK9,CDKN1A,ZMPSTE24,ENSG00000274276,STUB1,TRAIP,CDKN2D,NPM2,PRMT5,MCRS1,MAD2L2,SLC30A9,TADA3,CARM1,CIB1,KAT5,RNASEH2A,BATF,CEBPG,CCT7,CCT4,CCT2,TAF6L,CENPF,RAD51AP1,CTCF,CETN1,CETN2,CCT8,POLD3,CERS1,POLQ,PTGES3,RUVBL2,PPARGC1A,BRD8,EHMT2,SUB1,DBF4,APOBEC2,MORF4L1,ASCC3,TENT4A,TOPBP1,HSF2BP,CHD4,PRDM7,CHEK1,FAF1,KAT7,DMC1,WDHD1,BAZ2A,BAZ1A,SUPT16H,CHEK2,POLI,TREX2,POLG2,SHLD3,TREX1,PNKP,SGF29,CDCA5,PARK7,HELQ,CHRNA4,ESCO1,SCAND3,CIDEA,CGAS,RMI2,ERCC8,KLHDC3,TOP1MT,TADA1,EXOSC6,SFR1,SLC15A4,ALKBH2,PLD4,CCR6,USP43,KRBA2,CNTD1,ZSWIM7,INO80C,SWSAP1,ANKLE1,H1-8,JMY,HUS1B,APOBEC3D,NEK7,CRY2,PARP1,PARP4,E2F7,RAD9B,CSNK1E,TERB2,EME1,KASH5,CCN2,SHLD1,CTNNB1,ADRA2A,CCDC117,COMMD1,DTX3L,PPP4R2,ZNF827,KHDC3L,CYP1B1,ESCO2,MCMDC2,SHOC1,USP51,DACH1,SDE2,HFM1,DDB1,DDB2,APOBEC3H,GADD45A,DDX1,RNF168,DHX9,DDX11,DCP2,DFFA,DFFB,DHX36,DKC1,DNA2,DNASE1,DNASE1L1,DNASE1L2,DNASE1L3,DNASE2,DNMT1,DNMT3A,DNMT3B,DNTT,DUT,E4F1,EGF,EGFR,ARID2,EME2,NSMCE1,GGN,FAAP20,APOBEC3A,APOBEC3F,TET3,APLF,FLCN,CENPX,ZSCAN4,PRIMPOL,ENDOG,ERCC1,ERCC2,EREG,AKT1,EYA4,ERCC3,ERCC4,ERCC5,ERCC6,EYA1,EYA2,EYA3,EZH2,FANCA,FANCC,FANCD2,FANCE,PTK2B,FANCB,FANCF,FANCG,STOX1,LTO1,ALKBH3,LRWD1,FEN1,FGF2,FGF10,MAPK15,FGFR4,FH,ZBTB1,ZNF365,CEP164,FAN1,KIN,CCT5,PAXIP1,KDM2A,KDM1A,PDS5B,SMG1,FOXM1,WAPL,SETX,SWAP70,POGZ,SMC5,LPIN1,PSME4,FAM168A,PDS5A,SMG6,UBR2,FMR1,USP22,JADE2,SMCHD1,UFL1,SMG5,DICER1,SIRT1,SF3B3,ZFYVE26,SPIDR,CLCF1,FOS,GTPBP4,SMUG1,ORC6,ORC3,ZMYND8,SPO11,PLD3,POLA2,TFIP11,SPDYA,RNASEH1,ABL1,FUS,NEIL2,ZBTB38,MMS22L,RNF169,MCM9,MEIOB,XRCC6,ANKRD31,SHPRH,RAD54B,CIZ1,NIPBL,METTL7A,ASF1A,PARM1,PRKD2,RCHY1,IFFO1,POT1,BOD1L1,SAMHD1,SIN3A,SH2B1,HINFP,REXO2,ANKRD17,POLDIP2,EPC2,SENP3,GATA3,FBXO6,FBXO5,FBXO4,TINF2,GNL3,KAT2A,GDF2,GREM1,GFER,DNAJC2,MLH3,ANKRD1,TAF5L,BRPF3,APEX2,PRPF19,POLL,GLI1,APOBEC3C,GLI2,POLM,CECR2,MAJIN,REC114,TERB1,INO80E,MEIOC,ENDOV,STPG4,RNF212,NSMCE2,PAXX,LIN9,RGCC,SETD2,BABAM1,UBE2T,N6AMT1,BRD7,UHRF1,MSH6,GTF2H1,GTF2H2,GTF2H3,GTF2H4,REPIN1,TFPT,PSMC3IP,RPA4,DNMT3L,A1CF,DONSON,NOP53,TBX21,GZMA,H1-0,H1-2,H1-3,H1-4,H1-5,H1-6,H2AX,H1-1,ANXA3,HCRT,HELLS,HGF,ZBTB48,HMGB1,HMGB2,HMGB3,HMGN1,HMGA1,APAF1,C14orf39,HNRNPA1,HNRNPA2B1,HNRNPAB,HNRNPC,HNRNPD,HNRNPU,APEX1,HSF1,HSP90AA1,HSP90AB1,HSPD1,HUS1,APOBEC1,ENPP7,IHO1,ID3,H1-7,MCIDAS,STRA8,IGF1R,GEN1,POLN,IL2,IL4,IL6,IL7R,IL10,DPPA3,ISG20,H1-9P,FAM111B,ERCC6L2,SWI5,KCNK2,CENPS,KIF22,KPNA1,KPNA2,KMT5A,C1orf146,NUGGC,UBE2NL,LIG1,LIG3,LIG4,MYO18A,ST20,TEX19,LOX,GTF2H5,MIR146A,MIR221,MIR29A,MIR29B1,MIR29C,MAS1,MBD1,MC1R,MCM2,MCM3,MCM4,MCM5,MCM6,MCM7,MECP2,MAP3K4,MEN1,MGMT,ATXN3,MLH1,KMT2A,MNAT1,MPG,MPV17,MRE11,OOEP,MSH2,MSH3,MSH4,MSH5,,NUDT1,MTRR,MUTYH,MYC,ATF1,NAP1L1,NASP,NBN,ATM,NEK2,NFATC1,NFIA,NFIB,NFIC,NFIX,TONSL,NFRKB,NME1,NONO,NPAS2,NPM1,NPPC,NT5E,NTHL1,NVL,EID3,OGG1,ORC1,ORC2,ORC4,ORC5,RRM2B,SMARCAL1,NOX4,PARN,PAX6,FOXP3,ASCC1,EXOSC3,GLRX2,GMNN,PCNA,KMT5B,ING4,MRNIP,LEF1,ZBTB7A,FZR1,TAOK3,UBR5,TEX264,UCHL5,HEMK1,ACTL6B,POLK,RNF138,REV1,RTF2,DTL,PDGFA,VPS54,SIRT7,SIRT6,PDGFB,CINP,TDP2,PIAS4,PDGFRB,GINS2,UIMC1,ARID4B,RTEL1,PHB1,MBD3,PML,PMS1,PMS2P1,PMS2P5,PMS2P3,EXOSC10,PMS2,MIS18A,POLE3,CHRAC1,POLA1,POLB,POLD1,POLD2,POLE,POLE2,POLG,POLH,POLR2I,TERF2IP,POLRMT,GAR1,XRN1,ETAA1,ATR,EXOSC4,SHLD2,GNL3L,ING3,ATRX,INO80,OTUD4,MPHOSPH8,RNF111,NSMCE4A,ALKBH4,TET2,MBTD1,GATAD2A,GIN1,APTX,SLX1A,INO80D,CHTF8,TMEM161A,ADPRS,TIPIN,HPF1,PINX1,PARPBP,USP47,ZCWPW1,RADX,FANCL,WRAP53,PPP1R10,PPP2CA,RFWD3,PRMT6,PPP2R1A,RIF1,PBRM1,FANCI,EXD2,NAT10,NEIL3,MRGBP,NUDT15,PHF10,UBE2W,FBXW7,PPP4C,AP5S1,WDR33,ZGRF1,PPP5C,MCM10,NOP10,SMPD3,PRIM1,SUPT20H,PRIM2,OTUB1,NHP2,KDM4D,PKIB,CCDC88A,SLF2,N4BP2,ATF7IP,C1orf112,TDP1,PRKCD,PRKCG,HDAC8,PRKCQ,KMT2E,PRKDC,DMAP1,MAPK1,MAPK3,MAP2K7,TEX15,TEX12,TEX11,NSMCE3,YLPM1,BCCIP,TWNK,POLE4,FMN2,RAD18,UBQLN4,WRNIP1,SPIRE1,EXOSC5,SMARCAD1,HMCES,ENY2,EMSY,XAB2,NT5M,ATXN7L3,PRDM9,BACH1,TIGAR,REXO4,PPP4R3B,CBX8,AICDA,WDR18,ARID1B,NYNRIN,TAOK1,WDR48,PTMS,EP400,USP28,UVSSA,CAMSAP3,BEND3,USP37,FANCM,POLD4,CCNB1IP1,PTPRC,BARD1,BAX,RAD1,PURA,INIP,DNASE2B,WIZ,RAD9A,RAD17,RAD21,RAD23A,RAD23B,RAD51,RAD51C,RAD51B,RAD51D,RAD52,RAG1,RAG2,RAN,ARID4A,RBBP4,RBBP6,RBBP7,RBBP8,RBMS1,RECQL,UPF1,DPF2,REV3L,RFC1,RFC2,RFC3,RFC4,RFC5,ACTB,RLF,BCL6,APOBEC3G,BCL7A,RPA1,RPA2,RPA3,RPS3,,RRM1,RRM2,S100A11,ATXN7,FAM111A,CHTF18,CLSPN,PRDM14,FIGNL1,,TSPYL2,SMOC2,BLM,MAGEF1,MAP2K4,SET,SETMAR,SFPQ,MMS19,RAD21L1,TENT4B,NOC3L,NFKBIZ,SYCE3,DCLRE1C,NUCKS1,GMNC,MEAF6,AEN,GINS3,EXO5,BMI1,NMNAT1,NIBAN2,DCLRE1B,NABP1,METTL4,BCL11B,ACD,INTS3,BMPR2,SMARCA2,HLTF,SMARCA4,SMARCB1,SMARCC1,SMARCC2,SMARCD1,SMARCD2,SMARCD3,SMARCE1,SP100,FOXL2,SRC,BRCA1,SSBP1,SSRP1,BRCA2,STAT6,SUPT6H,SUPV3L1,SYCP1,TAF2,TAF4,TAF5,TAF6,TAF7,TAF9,TAF10,TAF12,TCF3,TCF7L2,VPS72,TCP1,TDG,TEP1,TERC,TERF1,TERF2,TERT,TFDP1,TFRC,TGFB1,TK1,TK2,TNF,TNFAIP1,TNP1,TOP1,TOP2A,TOP2B,TOP3A,TP53,TP53BP1,TP73,CCT3,TSN,TTF1,GTF2H2C,TWIST1,TNFSF4,PMS2P6,TYMS,GTF2H2C_2,UBE2A,UBE2B,UBE2D3,UBE2N,UBE2V1,UBE2V2,SUMO1,UCN,UNG,USP1,UVRAG,VCP,WAS,NSD2,WRN,WT1,XPA,XPC,XRCC1,XRCC2,XRCC3,XRCC4,XRCC5,YY1,CNBP,RNF113A,BTG2,USP7,OTUB2,HROB,CYREN,AUNIP,SLX1B,NABP2,FTO,DSCC1,DCTPP1,DEK,BRME1,BRCC3,PAGR1,OBI1,PGBD5,HMBOX1,RNASEH2B,NEIL1,SMC6,C11orf80,THAP9,PALB2,E2F8,TEFM,ZNF668,EHMT1,NHEJ1,MCMBP,ACTR5,ATAD5,JADE1,GRHL2,STN1,RMI1,PIF1,VCPIP1,CTC1,DBF4B,MUS81,FAAP100,KLHL15,TET1,EPC1,TNKS2,NDFIP1,EEPD1,YEATS4,HMGA2,CDK2AP1,DPF3,CDADC1,CDT1,DPF1,CHAF1B,USP9X,SMC1A,ARID1A,TRRAP,AXIN2,CDC7,CDC45,EOMES,SF3B5,INO80B,PARP9,SESN2,RHNO1,GRWD1,SPRTN,HDAC10,TATDN1,BRIP1,MND1,ZRANB3,USP44,BCAR3,ATRIP,ABRAXAS1,RNASEH2C,ASCC2,SLF1,ING5,GINS4,NUDT16L1,RAD54L,DOT1L,SLX4,CUL4B,SPIRE2,CUL4A,MCM8,SANBR,TTF2,SUPT3H,SMARCA5,SPATA22,HDGFL2,KMT5C,PARP10,FBH1,TBRG1,PPM1D,PWWP3A,MPND,USP45,PARG,TNKS1BP1,MAPKAPK5,CDC14B,ACTL6A,RUVBL1,TNKS,TNFSF13,CBS,BANF1,ALKBH1,KAT2B,IER3,SPHK1,ZPR1,CCNA2,TIMELESS,HERC2,MBD4,MBD2,TOP3B,H1-10,CCNE1,RNF8,TICRR,STPG1,CCT6A,SPOCD1,DNAJA3,USP10,RGN,MTA1,SMC3,AIFM1,CCNE2,ATP23,FAAP24,DYRK1B,EXO1,ZNF830,SLFN11,TTC5,AURKB,MTA2,PTTG1,NAF1,MGME1,DTD1,BCL7C,BCL7B,HELB,H2AC25,KLF4,TRIP13,TRIP12,LONP1,TADA2B,ADIPOQ,GCNA,ACTR8,ACVRL1,CD28,RECQL5,RECQL4,IL27RA,MACROH2A1,CHD1L,BABAM2,CD40,APOBEC3B,CD40LG,MORF4L2,MDC1,MARF1,DCAF1,TOX,JADE3,PCLAF,CDK1,GINS1,CDC5L,TELO2,CDC6,AP5Z1,SUPT7L,DCLRE1A,EXOG,USP3,CDC34,RBX1,THOC1,REC8 FOUNDER_NAMES