STANDARD_NAME GSE14415_NATURAL_TREG_VS_TCONV_UP SYSTEMATIC_NAME M2976 COLLECTION C7:IMMUNESIGDB MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/GSE14415_NATURAL_TREG_VS_TCONV_UP NAMESPACE HUMAN_GENE_SYMBOL DESCRIPTION_BRIEF Genes up-regulated in natural T reg versus T conv. DESCRIPTION_FULL The gene expression profile of peripheral Foxp3+ natural regulatory T cells isolated from Foxp3/EGFP bicistronic mice was compared to that of in vitro-induced regulatory T cells and to CD4+ conventional (Foxp3-) T cells. The role of the regulatory T cell transcription factor Foxp3 in shaping the transcriptosomes of natural and induced regulatory T cells was analyzed using mice expressing a mutant FOXP3-EGFP fusion protein (Foxp3deltaEGFP). We used gene expression microarrays to examine the transcriptional programs of natural and induced regulatory T cells and the function of Foxp3 in organizing the transcriptosomes of the respective cell type PMID 19265124 GEOID GSE14415 AUTHORS Haribhai D,Lin W,Edwards B,Ziegelbauer J,Salzman NH,Carlson MR,Li SH,Simpson PM,Chatila TA,Williams CB CONTRIBUTOR Jernej Godec CONTRIBUTOR_ORG Dana-Farber Cancer Institute EXACT_SOURCE GSE14415_2983_200_UP FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL SOURCE_MEMBERS 1110032A03Rik,1700056E22Rik,2310001H12Rik,2810408P10Rik,4933433P14Rik,9330175E14Rik,ADAMTS6,ADCK2,AI452195,ANKRD33B,ANKRD55,APC,ARHGAP15,ARHGAP26,ARHGEF12,ARL5B,ASB7,ATMIN,ATXN1,B230307C23Rik,B230325K18Rik,B3GNT5,BC005685,BC011426,BC030336,BCL2L1,BCL2L11,BTBD19,CAST,CBLB,CCDC125,CCNI,CCNK,CD164,CD226,CD3E,CD47,CD96,CHIT1,CHMP1B,CIRBP,CIZ1,CLEC2J,CNTNAP3,CORO2A,CPT1A,CRMP1,CROT,CRTC3,CSF2,CTLA4,CTSE,CTSO,CXCR6,D10627,D16ERTD472E,D230041D01Rik,DAZAP2,DEFB4,DSG1B,DVL3,E430029J22Rik,EID2B,EMB,EPSTI1,F2RL1,F2RL2,FAM57A,FBXL17,FBXL20,FBXO32,FILIP1,FOXN3,FOXP1,GAB3,GIMAP5,GIT1,GLTSCR2,GM10475,GM13961,GM14403,GM14473,GM15644,GM16425,GM4471,GM4955,GM9573,GNPDA2,GPR171,GPR55,GRAMD1B,GRLF1,H1F0,H2-K1,HNRPDL,I830012O16Rik,ICA1,IFIT3,IFNGR1,IL10RA,IL18R1,IL1RL1,IRAK3,IRF9,ITGA1,ITIH5,JARID2,KLRA3,KLRB1B,LGALS3BP,LOC100043371,LOC641050,MAF,MAML1,MANEA,MAP4K3,MAPK8IP3,MBD2,MCART1,MFHAS1,MIR146,MIR297B,MRPS18C,MS4A3,MX1,MYLIP,NEB,NFKBIA,NHLRC3,NOSIP,NUCB1,OCIAD2,OLFR1148,OLFR1275,OLFR1282,OLFR802,OLFR814,ORAI1,PCNX,PDCD1,PDCD4,PEAR1,PER1,PGAM2,PPFIBP1,PPM1H,PPP3CC,PSEN2,PTGER2,PTPN13,RAB12,RABGAP1L,RASGRP1,RBAK,RBM3,RUNX2,SAA3,SAMSN1,SERPINB9B,SETBP1,SFXN3,SLC38A9,SMAD7,SMAP2,SPATA6,SPRED2,SRGAP3,TACC2,TBCEL,TIGIT,TMEM106B,TMEM203,TMEM71,TNFRSF26,TOX,TRIM24,TRIM34,TSC22D3,TTC39B,TXNIP,UBASH3B,USP3,VAMP2,VMN2R96,YPEL5,ZBED3,ZBTB25,ZBTB34,ZBTB38,ZC3H6,ZFP120,ZFP187,ZFP455,ZFP74,ZFP790,ZFP874,ZKSCAN17,ZMIZ2,ZNHIT6,ZRANB1 GENE_SYMBOLS CFAP68,,ZNF17,,GSKIP,,ADAMTS6,ADCK2,PDE4D,ANKRD33B,ANKRD55,APC,ARHGAP15,ARHGAP26,ARHGEF12,ARL5B,ASB7,ATMIN,ATXN1,ZNF788P,,B3GNT5,,,MOSMO,BCL2L1,BCL2L11,BTBD19,CAST,CBLB,CCDC125,CCNI,CCNK,CD164,CD226,CD3E,CD47,CD96,CHIT1,CHMP1B,CIRBP,CIZ1,,CNTNAP3,CORO2A,CPT1A,CRMP1,CROT,CRTC3,CSF2,CTLA4,CTSE,CTSO,CXCR6,ZNF708,,,DAZAP2,DEFB4A,,DVL3,IFI16,EID2B,EMB,EPSTI1,F2RL1,F2RL2,TLCD3A,FBXL17,FBXL20,FBXO32,FILIP1,FOXN3,FOXP1,GAB3,GIMAP5,GIT1,NOP53,,,,,,,,,,GNPDA2,GPR171,GPR55,GRAMD1B,ARHGAP35,H1-0,HLA-A,HNRNPDL,IFIT3,ICA1,IFIT3,IFNGR1,IL10RA,IL18R1,IL1RL1,IRAK3,IRF9,ITGA1,ITIH5,JARID2,,,LGALS3BP,,,MAF,MAML1,MANEA,MAP4K3,MAPK8IP3,MBD2,SLC25A51,MFHAS1,,,MRPS18C,MS4A3,MX1,MYLIP,NEB,NFKBIA,NHLRC3,NOSIP,NUCB1,OCIAD2,,,,,,ORAI1,PCNX1,PDCD1,PDCD4,PEAR1,PER1,PGAM2,PPFIBP1,PPM1H,PPP3CC,PSEN2,PTGER2,PTPN13,RAB12,RABGAP1L,RASGRP1,RBAK,RBM3,RUNX2,SAA3P,SAMSN1,,SETBP1,SFXN3,SLC38A9,SMAD7,SMAP2,SPATA6,SPRED2,SRGAP3,TACC2,TBCEL,TIGIT,TMEM106B,TMEM203,TMEM71,,TOX,TRIM24,TRIM34,TSC22D3,TTC39B,TXNIP,UBASH3B,USP3,VAMP2,,YPEL5,ZBED3,ZBTB25,ZBTB34,ZBTB38,ZC3H6,,,,,,,ZNF496,ZMIZ2,ZNHIT6,ZRANB1 FOUNDER_NAMES