STANDARD_NAME GSE16385_UNTREATED_VS_12H_ROSIGLITAZONE_IFNG_TNF_TREATED_MACROPHAGE_DN SYSTEMATIC_NAME M7891 COLLECTION C7:IMMUNESIGDB MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/GSE16385_UNTREATED_VS_12H_ROSIGLITAZONE_IFNG_TNF_TREATED_MACROPHAGE_DN NAMESPACE HUMAN_GENE_SYMBOL DESCRIPTION_BRIEF Genes down-regulated in macrophages (12h): control versus IFNG, TNF [GeneID=3458;7124] and rosiglitazone [PubChem=77999]. DESCRIPTION_FULL Human CD14 positive monocytes were purified from healthy volunteers’ blood and cultured in vitro for 4, 12, 24, 72 hours. While culturing, macrophages were activated alternatively with interleukin-4 (IL-4 100 ng/ml) or classically with interferon-gamma (IFNg 100 ng/ml)+tumor necrosis factor (TNF 50 ng/ml) or left without activation. Simultaneously, macrophages were also treated with vehicle (DMSO:ethanol) or 1mM synthetic PPARg agonist, Rosiglitazone. We used Affymetrix microarrays (U133Plus 2.0) to analyze activation and PPARg-induced gene expression changes. PMID 21093321 GEOID GSE16385 AUTHORS Szanto A,Balint BL,Nagy ZS,Barta E,Dezso B,Pap A,Szeles L,Poliska S,Oros M,Evans RM,Barak Y,Schwabe J,Nagy L CONTRIBUTOR Jernej Godec CONTRIBUTOR_ORG Dana-Farber Cancer Institute EXACT_SOURCE GSE16385_2267_200_DN FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL SOURCE_MEMBERS ABCC3,ABCG4,ABHD15,ACBD4,AGFG2,AK2,ALDH8A1,ANAPC16,ANKRD45,AP2A2,APOA1BP,APP,ARMC7,ARPC5L,ATG12,ATP10B,ATP2B4,BARD1,BMPR1B,BTF3,BTG2,C12orf62,C15orf23,C17orf108,C19orf70,C20orf72,C21orf59,C2orf40,C4orf19,C6orf35,C7orf68,C9orf123,C9orf3,CCDC146,CCDC164,CCDC22,CCDC7,CCDC75,CDH26,CDKN2D,COL1A2,COMMD5,CREB1,CSNK2A2,CXorf21,CXorf22,CYC1,CYP11B1,CYP39A1,CYP4F22,DBC1,DDIT4,DIEXF,DMRTA1,DPH2,EFEMP1,EID2,EIF5A,EPAS1,EPB41,ERRFI1,ETV5,EXOSC2,FABP2,FAM188B,FAM40A,FAM49A,FAM55D,FGFR1OP2,FOXC1,FTSJ2,GABRB3,GCLM,GJC1,GNAL,GNGT2,GPR17,GPR34,GPX2,GTPBP5,HABP4,HDDC3,HIST3H2A,HOXB1,ICA1,ID1,ID2,IFITM3,IQCH,ITGB1BP2,ITPA,ITPRIPL1,KBTBD12,KCNE1L,KCNJ15,KCNK12,KCNN2,KHDC1L,KIAA1033,KIAA1522,LATS2,LDHAL6B,LEPREL2,LHX9,LIMCH1,LIPK,LOC81691,LPPR1,LRRC31,MAGED2,MARVELD1,MBLAC2,MED28,MFSD9,MND1,MORN2,MRPL40,MRPS24,MST1,MSX2,MYCBP2,MYH3,NAT9,NDUFAF2,NENF,NF1,NFIA,NIPSNAP3B,NR2C2AP,NUDT7,OIT3,OLFM3,OLFML2B,ORC3,PCBP4,PDCD2,PDK1,PHACTR3,PIK3IP1,PIR,PLEKHF1,PLOD2,PNISR,PNMT,POLE3,POLN,POLR2E,POMT1,PRDX2,PRKRIP1,PSMC3,PSMG3,PTTG1IP,RAB11FIP3,RAB5B,RAG1,RAPGEF3,RASGRP3,RINT1,RNF148,RPL27,RPL7L1,RPLP1,RPS16,RPUSD4,SAFB,SAMM50,SCN10A,SCYL1,SELM,SLC16A13,SLC25A34,SLC25A44,SLC29A3,SLC5A4,SOCS3,SPA17,ST18,STK32C,STRADA,SUMF2,TEC,THSD1,TIMM22,TMEM27,TXNIP,UBR7,UCHL1,USP29,VIL1,WDR38,WDR4,WNT10B,WNT3,WT1,YTHDF2,ZFP90,ZNF334,ZNF394,ZNF679 GENE_SYMBOLS ABCC3,ABCG4,ABHD15,ACBD4,AGFG2,AK2,ALDH8A1,ANAPC16,ANKRD45,AP2A2,NAXE,APP,ARMC7,ARPC5L,ATG12,ATP10B,ATP2B4,BARD1,BMPR1B,BTF3,BTG2,COX14,KNSTRN,LYRM9,MICOS13,MGME1,CFAP298,ECRG4,C4orf19,TMEM242,HILPDA,DMAC1,AOPEP,CCDC146,DRC1,CCDC22,CCDC7,GPATCH11,CDH26,CDKN2D,COL1A2,COMMD5,CREB1,CSNK2A2,TASL,CFAP47,CYC1,CYP11B1,CYP39A1,CYP4F22,BRINP1,DDIT4,UTP25,DMRTA1,DPH2,EFEMP1,EID2,EIF5A,EPAS1,EPB41,ERRFI1,ETV5,EXOSC2,FABP2,MINDY4,STRIP1,CYRIA,NXPE4,FGFR1OP2,FOXC1,MRM2,GABRB3,GCLM,GJC1,GNAL,GNGT2,GPR17,GPR34,GPX2,MTG2,HABP4,HDDC3,H2AC25,HOXB1,ICA1,ID1,ID2,IFITM3,IQCH,ITGB1BP2,ITPA,ITPRIPL1,KBTBD12,KCNE5,KCNJ15,KCNK12,KCNN2,KHDC1L,WASHC4,KIAA1522,LATS2,LDHAL6B,P3H3,LHX9,LIMCH1,LIPK,REXO5,PLPPR1,LRRC31,MAGED2,MARVELD1,MBLAC2,MED28,MFSD9,MND1,MORN2,MRPL40,MRPS24,MST1,MSX2,MYCBP2,MYH3,NAT9,NDUFAF2,NENF,NF1,NFIA,NIPSNAP3B,NR2C2AP,NUDT7,OIT3,OLFM3,OLFML2B,ORC3,PCBP4,PDCD2,PDK1,PHACTR3,PIK3IP1,PIR,PLEKHF1,PLOD2,PNISR,PNMT,POLE3,POLN,POLR2E,POMT1,PRDX2,PRKRIP1,PSMC3,PSMG3,PTTG1IP,RAB11FIP3,RAB5B,RAG1,RAPGEF3,RASGRP3,RINT1,RNF148,RPL27,RPL7L1,RPLP1,RPS16,RPUSD4,SAFB,SAMM50,SCN10A,SCYL1,SELENOM,SLC16A13,SLC25A34,SLC25A44,SLC29A3,SLC5A4,SOCS3,SPA17,ST18,STK32C,STRADA,SUMF2,TEC,THSD1,TIMM22,CLTRN,TXNIP,UBR7,UCHL1,USP29,VIL1,WDR38,WDR4,WNT10B,WNT3,WT1,YTHDF2,ZFP90,ZNF334,ZNF394,ZNF679 FOUNDER_NAMES