STANDARD_NAME GSE2128_CTRL_VS_MIMETOPE_NEGATIVE_SELECTION_DP_THYMOCYTE_NOD_UP SYSTEMATIC_NAME M6186 COLLECTION C7:IMMUNESIGDB MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/GSE2128_CTRL_VS_MIMETOPE_NEGATIVE_SELECTION_DP_THYMOCYTE_NOD_UP NAMESPACE HUMAN_GENE_SYMBOL DESCRIPTION_BRIEF Genes up-regulated in NOD CD4 CD8 double positive thymocyte transgenic for the BDC2.5 TCR incubated with no peptide 0h versus NOD CD4 CD8 double positive thymocyte transgenic for the BDC2.5 TCR incubated with mimetope negative sel 16h. DESCRIPTION_FULL Fetal thymic organ culture (FTOC) DC2.5 CD4+CD8+ thymocytes from B6g7 or NOD background. 0 or 16 hour after addition of the BDC mimitope PMID 15780994 GEOID GSE2128 AUTHORS Zucchelli S,Holler P,Yamagata T,Roy M,Benoist C,Mathis D CONTRIBUTOR Jernej Godec CONTRIBUTOR_ORG Dana-Farber Cancer Institute EXACT_SOURCE GSE2128_2392_200_UP FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL SOURCE_MEMBERS ABCA9,ABHD14B,ACER3,ACP5,ACYP2,ADAM15,AKAP1,APOE,ARAP2,ARAP3,ARID5A,ARMC5,ARNT,ATF3,ATHL1,ATP6AP1,AUP1,B3GNT2,B3GNT8,B4GALT1,B4GALT5,BCL2L11,BCL3,BLNK,C12orf69,C17orf76,C19orf47,C19orf66,C1QA,C1QB,C1QC,C3AR1,C5orf15,C6orf145,C7orf59,CA13,CASP4,CASP8,CBARA1,CCL4,CD14,CD33,CD72,CHD9,CHRM3,CLEC5A,CLPTM1,CLSTN1,COMT,CORO1C,CSF1R,CTPS2,CTSB,CTSS,CX3CR1,CXCL1,CXCL11,CXCR7,DAZ2,DDX1,DDX58,DGKD,DHX40,DLST,DOCK1,DOK2,DRAM2,EDEM1,EDN1,ENG,ETS2,FAM116A,FAM26F,FCER1G,FCGR1A,FCGR2A,FCGR3A,FMNL3,GALK1,GBP4,GBP7,GGA2,GGH,GLB1,GPR183,GPR84,GSTM3,HPGD,HRH1,HTRA2,IFI27,IFITM2,IFITM3,IGJ,IGKC,IL18BP,IL2RG,IL4I1,IL7R,IRAK3,IRF4,KDELR3,KIF1B,KLF7,KLHL13,LCP2,LGALS3BP,LGALS9B,LIFR,LOC100129269,LPP,LRP8,LY86,MAGI2,MAN1A1,MAN2A2,METRN,MFGE8,MGAT4A,MS4A6A,MS4A7,MTHFD2L,MTSS1,MYCBP2,NDST1,NEURL2,NR1H3,NUCB1,OAS1,ODZ4,P4HB,PCK2,PCYT1A,PDE2A,PDE7B,PDGFB,PDPN,PID1,PITPNC1,PLAC8,PLXDC2,PPARD,PREP,PRIC285,PRPS2,PTGR1,PTGS2,PTPLA,RAB3IL1,RAC2,RAI14,RALGPS2,RASGRP1,RBFOX2,RCN3,RELL1,RGS7BP,RHOH,RILPL1,RNASEH2C,RNASEL,RNF130,RTP4,SCAMP1,SCPEP1,SDC4,SEPP1,SEPT11,SERF1A,SLAMF9,SLC16A6,SLC25A33,SLC29A3,SLC38A1,SLC7A11,SMOX,SPRY1,SRXN1,ST6GALNAC6,STAT4,STK11IP,SULF2,SYK,THBS4,TICAM1,TIMP2,TLR1,TM7SF3,TM7SF4,TMEM176B,TMEM185A,TMEM65,TMLHE,TNFRSF1A,TNFRSF1B,TTPAL,TYROBP,UBE2A,VKORC1,WWC2 GENE_SYMBOLS ABCA9,ABHD14B,ACER3,ACP5,ACYP2,ADAM15,AKAP1,APOE,ARAP2,ARAP3,ARID5A,ARMC5,ARNT,ATF3,PGGHG,ATP6AP1,AUP1,B3GNT2,B3GNT8,B4GALT1,B4GALT5,BCL2L11,BCL3,BLNK,SMCO3,LRRC75A,C19orf47,SHFL,C1QA,C1QB,C1QC,C3AR1,C5orf15,PXDC1,LAMTOR4,CA13,CASP4,CASP8,MICU1,CCL4,CD14,CD33,CD72,CHD9,CHRM3,CLEC5A,CLPTM1,CLSTN1,COMT,CORO1C,CSF1R,CTPS2,CTSB,CTSS,CX3CR1,CXCL1,CXCL11,ACKR3,DAZ2,DDX1,RIGI,DGKD,DHX40,DLST,DOCK1,DOK2,DRAM2,EDEM1,EDN1,ENG,ETS2,DENND6A,CALHM6,FCER1G,FCGR1A,FCGR2A,FCGR3A,FMNL3,GALK1,GBP4,GBP7,GGA2,GGH,GLB1,GPR183,GPR84,GSTM3,HPGD,HRH1,HTRA2,IFI27,IFITM2,IFITM3,JCHAIN,IGKC,IL18BP,IL2RG,IL4I1,IL7R,IRAK3,IRF4,KDELR3,KIF1B,KLF7,KLHL13,LCP2,LGALS3BP,LGALS9B,LIFR,LINC01160,LPP,LRP8,LY86,MAGI2,MAN1A1,MAN2A2,METRN,MFGE8,MGAT4A,MS4A6A,MS4A7,MTHFD2L,MTSS1,MYCBP2,NDST1,NEURL2,NR1H3,NUCB1,OAS1,TENM4,P4HB,PCK2,PCYT1A,PDE2A,PDE7B,PDGFB,PDPN,PID1,PITPNC1,PLAC8,PLXDC2,PPARD,PREP,HELZ2,PRPS2,PTGR1,PTGS2,HACD1,RAB3IL1,RAC2,RAI14,RALGPS2,RASGRP1,RBFOX2,RCN3,RELL1,RGS7BP,RHOH,RILPL1,RNASEH2C,RNASEL,RNF130,RTP4,SCAMP1,SCPEP1,SDC4,SELENOP,SEPTIN11,SERF1A,SLAMF9,SLC16A6,SLC25A33,SLC29A3,SLC38A1,SLC7A11,SMOX,SPRY1,SRXN1,ST6GALNAC6,STAT4,STK11IP,SULF2,SYK,THBS4,TICAM1,TIMP2,TLR1,TM7SF3,DCSTAMP,TMEM176B,TMEM185A,TMEM65,TMLHE,TNFRSF1A,TNFRSF1B,TTPAL,TYROBP,UBE2A,VKORC1,WWC2 FOUNDER_NAMES