STANDARD_NAME	GSE22501_PERIPHERAL_BLOOD_VS_CORD_BLOOD_TREG_DN
SYSTEMATIC_NAME	M8367
COLLECTION	C7:IMMUNESIGDB
MSIGDB_URL	https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/GSE22501_PERIPHERAL_BLOOD_VS_CORD_BLOOD_TREG_DN
NAMESPACE	HUMAN_GENE_SYMBOL
DESCRIPTION_BRIEF	Genes down-regulated in T reg from: peripheral blood versus cord blood.
DESCRIPTION_FULL	Since the role of cord blood (CB) regulatory T cells (Tregs) for the suppression of the allogeneic T-cell response is under investigation, we analyzed and compared the functional properties and gene expression profile of Tregs expanded from CB units or from the peripheral blood (PB) of helathy donors. Tregs were purified from 23 CB units and from the PB of 13 donors and expanded for 6 days with anti-CD3, anti-CD28 and IL-2. Immunophenotypic analyses were performed, and suppressor activity of expanded Tregs was measured in mixed lymphocyte reaction (MLR) cultures. The IL-10 production capacity was tested and gene expression profile experiments were performed on 6 Tregs from PB and 4 from CB. CB and PB Tregs had similar immunophenotypic features. Tregs from CB presented a higher expansion capacity and genomic characterization showed in CB-derived Tregs a significant enrichments of genes involved in cell proliferation, chromatin modification and regulation of gene expression in CB-derived Tregs. All samples were positive for the Foxp3 gene and protein after expansion. CB and PB expanded Tregs exerted a comparable and potent suppressive function of MLR and presented a high in vitro IL-10 production capacity. Gene profile analysis also revealed for PB Tregs a significant enrichments of genes involved in the adaptive immune response.
PMID	21732086
GEOID	GSE22501
AUTHORS	Torelli GF,Maggio R,Peragine N,Chiaretti S,De Propris MS,Lucarelli B,Screnci M,Mascolo MG,Milano F,Iori AP,Girelli G,Guarini A,Foà R
CONTRIBUTOR	Jernej Godec
CONTRIBUTOR_ORG	Dana-Farber Cancer Institute
EXACT_SOURCE	GSE22501_3835_200_DN
FILTERED_BY_SIMILARITY	
EXTERNAL_NAMES_FOR_SIMILAR_TERMS	
EXTERNAL_DETAILS_URL	
SOURCE_MEMBERS	ABCC2,ABHD5,ACD,ACTC1,ADAM17,ADRBK2,AKAP5,AKR1D1,ALOX5AP,ANAPC13,APITD1,ARAF,ATF5,AVPR1A,BCAS2,BCL2L11,BMP6,BRDT,BTF3P12,C1orf63,C3AR1,C9orf144,CA5BP1,CCDC144A,CCL3,CCL4,CCNB2,CCR5,CCR8,CD47,CD8B,CDK6,CGGBP1,CHL1,CHST10,CLC,CLCN2,CSPG5,CT62,DARS,DLAT,DLGAP5,DYNLT1,EEF2,EFNA2,EFR3B,EMX2,EPAS1,EPO,EPS8,ETFB,EVI2A,EVI2B,FAM134C,FARP1,FCGR3B,FGFR1OP,FGL2,FLRT2,FMOD,FOXC1,FXR1,G6PC,GFI1,GIT2,GLB1L2,GOLGA8A,GPAA1,GPR107,GPR183,GPSM2,GUCY1A2,GYS2,HBEGF,HDAC6,HFE,HIST2H2BE,HPD,HPRT1,HR,IDE,IDH1,IGSF3,IL10,IL10RA,IL12A,IL18,IL18RAP,IL1RN,IL4R,IMMT,IRF9,ITGA9,JHDM1D,KCTD12,KHDRBS1,KIAA0528,KIAA0922,KIAA1199,KLHL18,KLRG1,KRT31,LAMA4,LCP2,LOC100131510,LRCH1,LRP6,LRRN3,LSM1,MAGEA5,MAP3K14,MAPKAP1,MED13,MEST,MGAT1,NAPG,NCAM1,NDUFB5,NEFH,NFIL3,NID1,NME6,OAT,OR7A5,OTUD3,P2RY14,PENK,PHKG2,PLA2G4A,PLEKHB2,PNLIPRP2,PON3,PPAP2A,PPP2R3A,PRKX,PTGER2,PTPN1,PTPRE,PTPRZ1,RASAL2,REEP5,REN,REST,RFK,RGR,RIPK2,RORC,RPA1,RPL32,S100A11,S100A7,S100P,S1PR1,SACM1L,SCAMP5,SCD,SDCBP,SELL,SELP,SERPINB3,SERPINC1,SIRPB1,SLA,SLC11A2,SLC22A2,SLC25A24,SLC2A2,SLC36A1,SLC39A8,SOCS1,SOS2,SPEN,SPINK2,SPINT2,STARD8,SURF2,SUZ12,TDGF1,TMEM47,TMPRSS11D,TP53BP2,TRIB2,TRIM33,TRIM52,TRPC6,TTC39A,UGT2B4,USP24,USP6NL,USP9Y,VCAN,WDFY3,WNT11,WRN,XBP1,ZCCHC11,ZDHHC17,ZDHHC18,ZFP36L1,ZFR2
GENE_SYMBOLS	ABCC2,ABHD5,ACD,ACTC1,ADAM17,GRK3,AKAP5,AKR1D1,ALOX5AP,ANAPC13,CENPS,ARAF,ATF5,AVPR1A,BCAS2,BCL2L11,BMP6,BRDT,BTF3P12,RSRP1,C3AR1,SPATA31F2P,CA5BP1,CCDC144A,CCL3,CCL4,CCNB2,CCR5,CCR8,CD47,CD8B,CDK6,CGGBP1,CHL1,CHST10,CLC,CLCN2,CSPG5,CT62,DARS1,DLAT,DLGAP5,DYNLT1,EEF2,EFNA2,EFR3B,EMX2,EPAS1,EPO,EPS8,ETFB,EVI2A,EVI2B,RETREG3,FARP1,FCGR3B,CEP43,FGL2,FLRT2,FMOD,FOXC1,FXR1,G6PC1,GFI1,GIT2,GLB1L2,GOLGA8A,GPAA1,GPR107,GPR183,GPSM2,GUCY1A2,GYS2,HBEGF,HDAC6,HFE,H2BC21,HPD,HPRT1,HR,IDE,IDH1,IGSF3,IL10,IL10RA,IL12A,IL18,IL18RAP,IL1RN,IL4R,IMMT,IRF9,ITGA9,KDM7A,KCTD12,KHDRBS1,C2CD5,TMEM131L,CEMIP,KLHL18,KLRG1,KRT31,LAMA4,LCP2,,LRCH1,LRP6,LRRN3,LSM1,MAGEA5P,MAP3K14,MAPKAP1,MED13,MEST,MGAT1,NAPG,NCAM1,NDUFB5,NEFH,NFIL3,NID1,NME6,OAT,OR7A5,OTUD3,P2RY14,PENK,PHKG2,PLA2G4A,PLEKHB2,PNLIPRP2,PON3,PLPP1,PPP2R3A,PRKX,PTGER2,PTPN1,PTPRE,PTPRZ1,RASAL2,REEP5,REN,REST,RFK,RGR,RIPK2,RORC,RPA1,RPL32,S100A11,S100A7,S100P,S1PR1,SACM1L,SCAMP5,SCD,SDCBP,SELL,SELP,SERPINB3,SERPINC1,SIRPB1,SLA,SLC11A2,SLC22A2,SLC25A24,SLC2A2,SLC36A1,SLC39A8,SOCS1,SOS2,SPEN,SPINK2,SPINT2,STARD8,SURF2,SUZ12,CRIPTO,TMEM47,TMPRSS11D,TP53BP2,TRIB2,TRIM33,TRIM52,TRPC6,TTC39A,UGT2B4,USP24,USP6NL,USP9Y,VCAN,WDFY3,WNT11,WRN,XBP1,TUT4,ZDHHC17,ZDHHC18,ZFP36L1,ZFR2
FOUNDER_NAMES