STANDARD_NAME GSE25088_WT_VS_STAT6_KO_MACROPHAGE_UP SYSTEMATIC_NAME M7973 COLLECTION C7:IMMUNESIGDB MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/GSE25088_WT_VS_STAT6_KO_MACROPHAGE_UP NAMESPACE HUMAN_GENE_SYMBOL DESCRIPTION_BRIEF Genes up-regulated in bone marrow-derived macrophages: wildtype versus STAT6 [GeneID=6778] knockout. DESCRIPTION_FULL C57Bl/6 wild-type and STAT6 KO mice were used to study PPARg and IL-4 signaling. Bone marrow of 3 mice per group was isolated and differentiated to macrophages with M-CSF (20 ng/ml). 20 ng/ml IL-4 was used to induce alternative macrophage activation and 1 uM Rosiglitazone (RSG) was used to activate PPARg. From each mouse 4 samples were generated: 1. M-CSF, 2. M-CSF+RSG, 3. IL-4 and 4. IL-4+RSG. All compounds were added throughout the whole differentiation process, and frech media was added every other day. Control cells were treated with vehicle (DMSO:ethanol). After 10 days, RNA was isolated and gene expression profiles were analyzed using Mouse Genome 430 2.0 microarrays from Affymetrix. PMID 21093321 GEOID GSE25088 AUTHORS Szanto A,Balint BL,Nagy ZS,Barta E,Dezso B,Pap A,Szeles L,Poliska S,Oros M,Evans RM,Barak Y,Schwabe J,Nagy L CONTRIBUTOR Jernej Godec CONTRIBUTOR_ORG Dana-Farber Cancer Institute EXACT_SOURCE GSE25088_2286_200_UP FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL SOURCE_MEMBERS ABHD10,ACY1,AGA,AKAP13,ALPK2,ANP32A,APH1A,APOL6,ARID1B,ARL6IP4,ASPM,ATRN,ATXN7L3B,AURKB,BACH2,BCL2L13,BNIP1,C1QC,C6orf48,C9orf46,CAMK1G,CASC4,CBLB,CCDC66,CDK5RAP3,CHP,CLCN5,CLEC16A,CLEC4G,COX4I1,COX7A2L,CREBL2,CS,CSMD1,CTDP1,DDB2,DYRK4,EIF2S3,ERGIC2,ERGIC3,ERLEC1,EYA4,F10,FAF1,FAHD2A,FARP2,FECH,GALC,GAS5,GBP4,GGTA1P,GNB2L1,GOLM1,GPHN,GRN,GTPBP1,HEXIM2,HIGD2A,HMG20A,HMG20B,HMGN2,HSPD1,ICA1,IFI44,IFRD1,ITFG3,IVD,JOSD1,KCNH2,KCNN1,KIAA0226,LACE1,LDB1,LIN54,LITAF,LMNB2,LMO4,LOC100128993,LOC100287628,LOC100505696,LOC100505718,LOC284801,LOC400622,LOC440896,LOC646870,LRPPRC,MALT1,MANBA,MBOAT2,MCM6,MED12,MEPCE,MGLL,MICAL1,MLL2,MND1,MRAS,MRPL45,MT1M,MYL5,MYO15B,NBEAL2,NFIA,NFS1,NSA2,ODC1,OPA1,OXCT1,PAK1,PANK1,PARP12,PCP4L1,PEBP1,PFKM,PHACTR3,PHB2,PHF2P1,PI15,PIN1P1,PION,PITHD1,PLCZ1,PLEKHG4,PPM1J,PPP2R5A,PRKAB1,PRORSD1P,PSMG2,PTCD3,PTPN18,QARS,RAD54L2,RAMP1,RANBP10,RASA3,RASSF5,RELB,RMI2,RNF182,RPL10A,RPL4,RPL41,RPLP0,RPN2,RPS10,RPS12,RPS13,RPS2,RPS23,RXRB,SDS,SDSL,SEC11A,SEPT11,SFMBT1,SFT2D3,SFXN4,SLC22A23,SLC25A41,SLC39A3,SND1,SNHG11,SOX7,SPC25,SPECC1L,SRPR,SRPRB,SSX2IP,ST7-AS1,STARD7,STEAP1B,STH,SUV39H1,TERF2,TESC,TIMM9,TLE4,TMCO4,TMEM192,TMEM216,TMEM5,TMEM62,TNXB,TOE1,TOMM70A,TOR3A,TRAF7,TRMT1,TRMT5,UBE2E1,UBE2E2,UBXN1,XAGE3,XPO4,ZDHHC18,ZMAT1,ZNF434,ZNF496,ZNF618,ZNF844 GENE_SYMBOLS ABHD10,ACY1,AGA,AKAP13,ALPK2,ANP32A,APH1A,APOL6,ARID1B,ARL6IP4,ASPM,ATRN,ATXN7L3B,AURKB,BACH2,BCL2L13,BNIP1,C1QC,SNHG32,PLGRKT,CAMK1G,GOLM2,CBLB,CCDC66,CDK5RAP3,CHP1,CLCN5,CLEC16A,CLEC4G,COX4I1,COX7A2L,CREBL2,CS,CSMD1,CTDP1,DDB2,DYRK4,EIF2S3,ERGIC2,ERGIC3,ERLEC1,EYA4,F10,FAF1,FAHD2A,FARP2,FECH,GALC,GAS5,GBP4,GGTA1,RACK1,GOLM1,GPHN,GRN,GTPBP1,HEXIM2,HIGD2A,HMG20A,HMG20B,HMGN2,HSPD1,ICA1,IFI44,IFRD1,FAM234A,IVD,JOSD1,KCNH2,KCNN1,RUBCN,AFG1L,LDB1,LIN54,LITAF,LMNB2,LMO4,,,SH3BP5-AS1,LINC01592,MIR663AHG,ENSG00000267665,LINC03025,,LRPPRC,MALT1,MANBA,MBOAT2,MCM6,MED12,MEPCE,MGLL,MICAL1,KMT2D,MND1,MRAS,MRPL45,MT1M,MYL5,MYO15B,NBEAL2,NFIA,NFS1,NSA2,ODC1,OPA1,OXCT1,PAK1,PANK1,PARP12,PCP4L1,PEBP1,PFKM,PHACTR3,PHB2,,PI15,PIN1P1,GSAP,PITHD1,PLCZ1,PLEKHG4,PPM1J,PPP2R5A,PRKAB1,PRORSD1P,PSMG2,PTCD3,PTPN18,EPRS1,RAD54L2,RAMP1,RANBP10,RASA3,RASSF5,RELB,RMI2,RNF182,RPL10A,RPL4,RPL41,RPLP0,RPN2,RPS10,RPS12,RPS13,RPS2,RPS23,RXRB,SDS,SDSL,SEC11A,SEPTIN11,SFMBT1,SFT2D3,SFXN4,SLC22A23,SLC25A41,SLC39A3,SND1,SNHG11,SOX7,SPC25,SPECC1L,SRPRA,SRPRB,SSX2IP,ST7-AS1,STARD7,STEAP1B,STH,SUV39H1,TERF2,TESC,TIMM9,TLE4,TMCO4,TMEM192,TMEM216,RXYLT1,TMEM62,TNXB,TOE1,TOMM70,TOR3A,TRAF7,TRMT1,TRMT5,UBE2E1,UBE2E2,UBXN1,XAGE3,XPO4,ZDHHC18,ZMAT1,ZSCAN32,ZNF496,ZNF618,ZNF844 FOUNDER_NAMES