STANDARD_NAME	GSE29949_CD8_NEG_DC_SPLEEN_VS_DC_BRAIN_DN
SYSTEMATIC_NAME	M8403
COLLECTION	C7:IMMUNESIGDB
MSIGDB_URL	https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/GSE29949_CD8_NEG_DC_SPLEEN_VS_DC_BRAIN_DN
NAMESPACE	HUMAN_GENE_SYMBOL
DESCRIPTION_BRIEF	Genes down-regulated in dendritic cells: spleen CD8- versus brain.
DESCRIPTION_FULL	To understand the functional relationship between brain dendritic cells (brain DCs) and other myeloid cells, we compared the gene expression profile of m/chDCs to that of bone marrow monocytes, brain microglia and classical spleen CD8+ and CD8- DCs. In order to obtain enough brain DCs for mRNA extraction, we expanded brain DCs with in vivo Flt3L treatment before purification.
PMID	21788405
GEOID	GSE29949
AUTHORS	Anandasabapathy N,Victora GD,Meredith M,Feder R,Dong B,Kluger C,Yao K,Dustin ML,Nussenzweig MC,Steinman RM,Liu K
CONTRIBUTOR	Jernej Godec
CONTRIBUTOR_ORG	Dana-Farber Cancer Institute
EXACT_SOURCE	GSE29949_3449_200_DN
FILTERED_BY_SIMILARITY	
EXTERNAL_NAMES_FOR_SIMILAR_TERMS	
EXTERNAL_DETAILS_URL	
SOURCE_MEMBERS	ABCA12,ABCG1,ACAT1,ACOX1,ADSS,ALKBH1,ANAPC5,AP2B1,APOBEC3B,ARG2,ARHGAP11A,ARHGAP29,ARID4B,ARL4D,ART3,ASTN1,ATF3,ATM,ATP5I,B4GALT4,BAG2,C16orf45,C2orf3,C6orf26,C9orf91,CAD,CCL2,CCL20,CCS,CCT6B,CD2,CD200,CD226,CD27,CD48,CD6,CD97,CLCA2,CLCN5,CLEC2B,CLPS,CLPX,COX7A1,CSN3,CSNK1D,CTGF,CXCL2,CXCL3,DDX46,DDX52,DHRS3,EIF2S2,EIF4A3,EPS8,EXOSC9,EYA3,FABP5,FAM115A,FAM172A,FAM53B,FBP2,FEM1C,FGFR1OP,FKTN,FLNB,GAPDH,GBP2,GEM,GEMIN4,GGPS1,GLCE,GNG11,GPA33,GPR65,GRM1,GTF3C2,HCP5,HIST1H4L,HLTF,HMGB1,ID3,IFIT5,IFNGR1,IGF2BP3,IGFBP4,IQGAP2,IRF9,ITM2A,JAK2,KCTD2,KIAA0907,KLHL23,KPNA1,LPL,LSR,LYST,LYZ,MAP3K8,MAPK12,MCM3AP,MDFI,MDFIC,MED13L,MIOS,MPP6,MTSS1,MYBPC2,MYCNOS,NDUFB6,NEDD4,NEK9,NINL,NPM1,NR4A2,OSGEP,PAFAH2,PANX1,PAPOLA,PDE3B,PDE8A,PDS5B,PEX3,PHYH,PI4K2A,PIGC,PKN2,PLA2G7,PLCB1,PLS3,POU2AF1,POU6F1,PPBP,PPIE,PPP1CC,PPP1R2P9,PRCP,PRDX3,PRPF19,PSME2,PTK2B,PTPN22,PTTG1,RAB40B,RAB7L1,RANBP6,RASA1,RB1,RBFOX2,RBM19,RCBTB2,RECK,REL,REST,RFC4,RGS10,RGS16,RHOH,RLF,RNASE2,RND3,RPL21,SCAMP1,SEPHS1,SEPHS2,SERPINE2,SLAMF1,SLC25A14,SLC27A2,SLCO2B1,SMC5,SNRPE,SPAG5,SPP1,STK38L,TAF15,TAF2,TBCE,TCEAL1,TGIF1,TNFRSF10B,TRAF1,TRIM32,TSN,TUBGCP3,UBAC1,UBXN2B,VPS13D,VPS8,WDR77,XRCC4,YIPF1,ZBTB1,ZNF177,ZNF193,ZNF238,ZNF266,ZNF273,ZNF318,ZNF529,ZNF84
GENE_SYMBOLS	ABCA12,ABCG1,ACAT1,ACOX1,ADSS2,ALKBH1,ANAPC5,AP2B1,APOBEC3B,ARG2,ARHGAP11A,ARHGAP29,ARID4B,ARL4D,ART3,ASTN1,ATF3,ATM,ATP5ME,B4GALT4,BAG2,BMERB1,GCFC2,SAPCD1,TMEM268,CAD,CCL2,CCL20,CCS,CCT6B,CD2,CD200,CD226,CD27,CD48,CD6,ADGRE5,CLCA2,CLCN5,CLEC2B,CLPS,CLPX,COX7A1,CSN3,CSNK1D,CCN2,CXCL2,CXCL3,DDX46,DDX52,DHRS3,EIF2S2,EIF4A3,EPS8,EXOSC9,EYA3,FABP5,TCAF1,ARB2A,FAM53B,FBP2,FEM1C,CEP43,FKTN,FLNB,GAPDH,GBP2,GEM,GEMIN4,GGPS1,GLCE,GNG11,GPA33,GPR65,GRM1,GTF3C2,HCP5,H4C13,HLTF,HMGB1,ID3,IFIT5,IFNGR1,IGF2BP3,IGFBP4,IQGAP2,IRF9,ITM2A,JAK2,KCTD2,KHDC4,KLHL23,KPNA1,LPL,LSR,LYST,LYZ,MAP3K8,MAPK12,MCM3AP,MDFI,MDFIC,MED13L,MIOS,PALS2,MTSS1,MYBPC2,MYCNOS,NDUFB6,NEDD4,NEK9,NINL,NPM1,NR4A2,OSGEP,PAFAH2,PANX1,PAPOLA,PDE3B,PDE8A,PDS5B,PEX3,PHYH,PI4K2A,PIGC,PKN2,PLA2G7,PLCB1,PLS3,POU2AF1,POU6F1,PPBP,PPIE,PPP1CC,PPP1R2C,PRCP,PRDX3,PRPF19,PSME2,PTK2B,PTPN22,PTTG1,RAB40B,RAB29,RANBP6,RASA1,RB1,RBFOX2,RBM19,RCBTB2,RECK,REL,REST,RFC4,RGS10,RGS16,RHOH,RLF,RNASE2,RND3,RPL21,SCAMP1,SEPHS1,SEPHS2,SERPINE2,SLAMF1,SLC25A14,SLC27A2,SLCO2B1,SMC5,SNRPE,SPAG5,SPP1,STK38L,TAF15,TAF2,TBCE,TCEAL1,TGIF1,TNFRSF10B,TRAF1,TRIM32,TSN,TUBGCP3,UBAC1,UBXN2B,VPS13D,VPS8,WDR77,XRCC4,YIPF1,ZBTB1,ZNF177,ZSCAN9,ZBTB18,ZNF266,ZNF273,ZNF318,ZNF529,ZNF84
FOUNDER_NAMES