STANDARD_NAME	GSE3039_B2_VS_B1_BCELL_UP
SYSTEMATIC_NAME	M6450
COLLECTION	C7:IMMUNESIGDB
MSIGDB_URL	https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/GSE3039_B2_VS_B1_BCELL_UP
NAMESPACE	HUMAN_GENE_SYMBOL
DESCRIPTION_BRIEF	Genes up-regulated in B lymphocytes: B2 versus B1.
DESCRIPTION_FULL	Three innate (B1-B, NKT, CD8aaT cells) and adaptive (B2-B, CD4T, CD8abT cells) cell-types were sorted by FACS. Three biological replicates for NKT, CD4T, CD8aaT, CD8abT cells and two biological replicates for B1 and B2 cells were generated and the expression profiles were determined using Affymetrix Mu74Av2 chip. Comparisons between the sample groups allow the identification of genes differentially expressed between the innate and adaptive cell-types.
PMID	16623764
GEOID	GSE3039
AUTHORS	Yamagata T,Benoist C,Mathis D
CONTRIBUTOR	Jernej Godec
CONTRIBUTOR_ORG	Dana-Farber Cancer Institute
EXACT_SOURCE	GSE3039_3214_200_UP
FILTERED_BY_SIMILARITY	
EXTERNAL_NAMES_FOR_SIMILAR_TERMS	
EXTERNAL_DETAILS_URL	
SOURCE_MEMBERS	ABCA1,ACE,ACP2,ADD3,AGRN,AHSP,AKAP11,AKAP9,AKR1B10,ALAS2,AP3M2,APOBEC1,ARFIP1,ARHGAP26,ARL15,ASAH1,ATF6,ATM,AVPI1,B4GALT4,BBX,BCL10,BMP2,BTG1,C10orf118,C10orf72,C19orf66,C1orf189,C3orf33,C3orf58,C5orf22,C5orf41,C9orf5,CALML4,CCL24,CCND1,CCRL2,CD163,CD1D,CD40,CD79A,CEP290,CHD3,CIITA,CKB,CLEC4M,CRIM1,CX3CR1,CXCR2,CXCR5,CYTH3,CYTIP,DCLRE1C,DDX23,DENND4A,DOCK4,EEF2K,ENPP4,ERLIN1,ETV1,FARP2,FBRSL1,FKBP7,FOXN3,FOXO1,FRAT1,GALNT1,GDI2,GIMAP1,GIMAP4,GLCCI1,GLIPR1,GM2A,GNG2,GPR124,GRAMD1C,HCK,HEBP1,HES1,HLA-DOA,HOOK3,HRH1,IFI27,IFI30,IFIT1,IFT172,IKZF2,IL18R1,IMMP2L,INADL,INPP4B,INPP5K,IRGM,ISG20,ITGA9,ITGB3,JUNB,KBTBD11,KCNJ8,KIF21B,KLRC1,KRIT1,LAX1,LMNB1,MAP3K5,MARCO,MCL1,MDM1,MFSD9,MGST1,MPP5,MPZL3,MRAP,MYO9A,MZB1,NAT8L,NCR1,NR1H3,NR4A1,NRIP1,NRM,OXSM,PDE7A,PDGFC,PHC1,PHLPP1,PHLPP2,PIGL,PIK3IP1,PILRB,PLAGL1,PPAP2A,PREB,PRG4,PRKAB2,PRR5L,PTGIS,RAB11FIP2,RASGRP2,RASGRP3,RIMS3,RYR3,SCD,SCRG1,SEC14L1,SELM,SELPLG,SFT2D1,SFXN2,SGK196,SGSH,SHISA5,SIPA1L1,SLAMF7,SLAMF8,SLC15A2,SLC16A9,SLC22A23,SLC25A31,SLC25A37,SLC4A1,SLC8A1,SLPI,SLU7,SNCA,SPICE1,SPIRE1,STAB2,STARD5,STK10,STK32C,STX17,STXBP6,SULF2,SYCP2,TBC1D9,TGFBR3,TIFA,TLR8,TMEM176A,TMEM176B,TNFRSF14,TNFRSF1A,TRIP6,TSPAN3,TSTD1,TUBB2B,TXNDC16,UBD,UBE2L6,UIMC1,USP3,VPS16,ZBTB41,ZFP36,ZKSCAN1,ZMYM6NB,ZNF12,ZNF229,ZNF467
GENE_SYMBOLS	ABCA1,ACE,ACP2,ADD3,AGRN,AHSP,AKAP11,AKAP9,AKR1B10,ALAS2,AP3M2,APOBEC1,ARFIP1,ARHGAP26,ARL15,ASAH1,ATF6,ATM,AVPI1,B4GALT4,BBX,BCL10,BMP2,BTG1,CCDC186,VSTM4,SHFL,CFAP141,C3orf33,DIPK2A,C5orf22,CREBRF,TMEM245,CALML4,CCL24,CCND1,CCRL2,CD163,CD1D,CD40,CD79A,CEP290,CHD3,CIITA,CKB,CLEC4M,CRIM1,CX3CR1,CXCR2,CXCR5,CYTH3,CYTIP,DCLRE1C,DDX23,DENND4A,DOCK4,EEF2K,ENPP4,ERLIN1,ETV1,FARP2,FBRSL1,FKBP7,FOXN3,FOXO1,FRAT1,GALNT1,GDI2,GIMAP1,GIMAP4,GLCCI1,GLIPR1,GM2A,GNG2,ADGRA2,GRAMD1C,HCK,HEBP1,HES1,HLA-DOA,HOOK3,HRH1,IFI27,IFI30,IFIT1,IFT172,IKZF2,IL18R1,IMMP2L,PATJ,INPP4B,INPP5K,IRGM,ISG20,ITGA9,ITGB3,JUNB,KBTBD11,KCNJ8,KIF21B,KLRC1,KRIT1,LAX1,LMNB1,MAP3K5,MARCO,MCL1,MDM1,MFSD9,MGST1,PALS1,MPZL3,MRAP,MYO9A,MZB1,NAT8L,NCR1,NR1H3,NR4A1,NRIP1,NRM,OXSM,PDE7A,PDGFC,PHC1,PHLPP1,PHLPP2,PIGL,PIK3IP1,PILRB,PLAGL1,PLPP1,PREB,PRG4,PRKAB2,PRR5L,PTGIS,RAB11FIP2,RASGRP2,RASGRP3,RIMS3,RYR3,SCD,SCRG1,SEC14L1,SELENOM,SELPLG,SFT2D1,SFXN2,,SGSH,SHISA5,SIPA1L1,SLAMF7,SLAMF8,SLC15A2,SLC16A9,SLC22A23,SLC25A31,SLC25A37,SLC4A1,SLC8A1,SLPI,SLU7,SNCA,SPICE1,SPIRE1,STAB2,STARD5,STK10,STK32C,STX17,STXBP6,SULF2,SYCP2,TBC1D9,TGFBR3,TIFA,TLR8,TMEM176A,TMEM176B,TNFRSF14,TNFRSF1A,TRIP6,TSPAN3,TSTD1,TUBB2B,TXNDC16,UBD,UBE2L6,UIMC1,USP3,VPS16,ZBTB41,ZFP36,ZKSCAN1,TMEM35B,ZNF12,ZNF229,ZNF467
FOUNDER_NAMES