STANDARD_NAME GSE3203_UNTREATED_VS_IFNB_TREATED_LN_BCELL_UP SYSTEMATIC_NAME M6795 COLLECTION C7:IMMUNESIGDB MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/GSE3203_UNTREATED_VS_IFNB_TREATED_LN_BCELL_UP NAMESPACE HUMAN_GENE_SYMBOL DESCRIPTION_BRIEF Genes up-regulated in lymph node B lymphocytes: untreated versus interferon beta. DESCRIPTION_FULL Influenza virus infection-induced gene expression changes of regional B cells are mediated at least in part through type I Interferon: Our objective is to determine whether the influenza virus-infection induced gene expression changes in regional lymph node B cells are facilitated at least in part through type I interferon. Our specific aim is to compare the gene expression profile of highly FACS-purified B cells in the regional lymph nodes of wildtype and IFNR-/- mice prior to and 48h following infection with influenza virus infection and to contrast this expression profile with that of FACS-purified wildtype B cells activated in vitro with IFN-beta +/- anti-CD86 for 12h. PMID 17237394 GEOID GSE3203 AUTHORS Chang WL,Coro ES,Rau FC,Xiao Y,Erle DJ,Baumgarth N CONTRIBUTOR Jernej Godec CONTRIBUTOR_ORG Dana-Farber Cancer Institute EXACT_SOURCE GSE3203_2809_200_UP FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL SOURCE_MEMBERS ABLIM1,ADRBK2,AKAP6,ALOX12B,AMN1,AMOTL2,ANKRD54,ANXA4,APEX2,ARL6IP6,ASCL1,ATE1,ATG4D,ATXN7,BBS5,BEND5,BHMT,BMP2,BOK,C12orf29,C1orf114,C20orf196,C3orf67,C4orf41,C9orf82,CAB39L,CACNA1H,CAPS2,CCDC117,CCDC127,CCDC160,CD79A,CD84,CETN2,CHD1L,CHST11,CLCA1,CLEC4G,CLN5,CLPTM1L,CNOT8,COL5A2,CPNE8,CSGALNACT1,CTRL,CXorf23,CYP26A1,DCLRE1C,DMRTC2,DNMBP,DUSP22,EAF2,EEA1,ENPP3,ERGIC2,FAM102A,FAM120C,FAM134B,FAM13B,FAM19A3,FAM84B,FBXO11,FGD6,FHOD1,GABRD,GGH,GLTSCR1,GML,GOPC,GPR137B,GPR22,GPRASP1,GPRIN2,GSN,H1FOO,HDHD2,HEXDC,HGFAC,HIVEP2,HMGCR,ICOS,IDS,IL18R1,IL1RAPL1,IL6ST,IMPA1,INPP5B,INVS,ITGA2,ITGAV,JAZF1,KBTBD7,KCNV1,KIAA1211,KRT222,L3MBTL3,LATS1,LOC100129924,LOC285556,LOC388630,LOC643037,LPIN2,LPIN3,LRSAM1,LTK,MAGI3,MAN1A1,MBL2,MCM3AP,MDFIC,MED28,MFF,MMP11,MPEG1,MPZL2,MPZL3,MS4A7,MTF1,MTSS1,MYL4,NARF,NCOA4,NDUFA4,NFATC2IP,NPR2,NSDHL,NTF3,OMA1,OSBPL8,P2RY12,PAG1,PBX3,PDCL3,PHC3,PHKB,PIK3CG,PIKFYVE,PMEPA1,PPAPDC2,PRKAA1,PRR13,PTPN14,RASA2,RIT1,RPAP2,RPS21,RUNDC3B,RUNX1T1,SAT1,SCN8A,SCYL1,SEMA5A,SERP1,SH3BGRL,SLC17A5,SLC30A9,SLC31A1,SLC4A7,SLC7A6OS,SLC9A9,SNAI1,SNTA1,SOAT1,SOLH,SP1,SPAG9,SPATA18,SRGAP1,STARD4,STXBP3,SWAP70,TAF2,TBC1D19,TBC1D5,TBK1,TMED6,TMED7,TMEM41B,TMEM81,TMEM86B,TMF1,TPCN1,TPD52L1,TRHR,TSPAN15,USO1,USP15,VPS26A,WAPAL,WIF1,XIST,YEATS4,ZCCHC11,ZDBF2,ZDHHC23,ZFP36L1,ZNF180,ZNF2,ZNF583,ZNF592 GENE_SYMBOLS ABLIM1,GRK3,AKAP6,ALOX12B,AMN1,AMOTL2,ANKRD54,ANXA4,APEX2,ARL6IP6,ASCL1,ATE1,ATG4D,ATXN7,BBS5,BEND5,BHMT,BMP2,BOK,C12orf29,CCDC181,SHLD1,CFAP20DC,TRAPPC11,CAAP1,CAB39L,CACNA1H,CAPS2,CCDC117,CCDC127,CCDC160,CD79A,CD84,CETN2,CHD1L,CHST11,CLCA1,CLEC4G,CLN5,CLPTM1L,CNOT8,COL5A2,CPNE8,CSGALNACT1,CTRL,BCLAF3,CYP26A1,DCLRE1C,DMRTC2,DNMBP,DUSP22,EAF2,EEA1,ENPP3,ERGIC2,EEIG1,FAM120C,RETREG1,FAM13B,TAFA3,LRATD2,FBXO11,FGD6,FHOD1,GABRD,GGH,BICRA,GML,GOPC,GPR137B,GPR22,GPRASP1,GPRIN2,GSN,H1-8,HDHD2,HEXD,HGFAC,HIVEP2,HMGCR,ICOS,IDS,IL18R1,IL1RAPL1,IL6ST,IMPA1,INPP5B,INVS,ITGA2,ITGAV,JAZF1,KBTBD7,KCNV1,CRACD,KRT222,L3MBTL3,LATS1,TMEM269,C4orf54,TRABD2B,C11orf97,LPIN2,LPIN3,LRSAM1,LTK,MAGI3,MAN1A1,MBL2,MCM3AP,MDFIC,MED28,MFF,MMP11,MPEG1,MPZL2,MPZL3,MS4A7,MTF1,MTSS1,MYL4,NARF,NCOA4,NDUFA4,NFATC2IP,NPR2,NSDHL,NTF3,OMA1,OSBPL8,P2RY12,PAG1,PBX3,PDCL3,PHC3,PHKB,PIK3CG,PIKFYVE,PMEPA1,PLPP6,PRKAA1,PRR13,PTPN14,RASA2,RIT1,RPAP2,RPS21,RUNDC3B,RUNX1T1,SAT1,SCN8A,SCYL1,SEMA5A,SERP1,SH3BGRL,SLC17A5,SLC30A9,SLC31A1,SLC4A7,SLC7A6OS,SLC9A9,SNAI1,SNTA1,SOAT1,CAPN15,SP1,SPAG9,SPATA18,SRGAP1,STARD4,STXBP3,SWAP70,TAF2,TBC1D19,TBC1D5,TBK1,TMED6,TMED7,TMEM41B,TMEM81,TMEM86B,TMF1,TPCN1,TPD52L1,TRHR,TSPAN15,USO1,USP15,VPS26A,WAPL,WIF1,XIST,YEATS4,TUT4,ZDBF2,ZDHHC23,ZFP36L1,ZNF180,ZNF2,ZNF583,ZNF592 FOUNDER_NAMES