STANDARD_NAME GSE32901_NAIVE_VS_TH17_NEG_CD4_TCELL_DN SYSTEMATIC_NAME M8930 COLLECTION C7:IMMUNESIGDB MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/GSE32901_NAIVE_VS_TH17_NEG_CD4_TCELL_DN NAMESPACE HUMAN_GENE_SYMBOL DESCRIPTION_BRIEF Genes down-regulated in CD4 [GeneID=920] T cells: naïve versus Th17 negative. DESCRIPTION_FULL In this study, we examined differential gene expression in naïve human CD4+ T cells, as well as in effector Th1, Th17-negative and Th17-enriched CD4- T cell subsets. We observed a marked enrichment for increased gene expression in effector CD4+ T cells compared to naive CD4+ among immune-mediated disease oci genes. Within effector T cells, expression of disease-associated genes was increased in Th17-enriched compared to Th17-negative cells. We used microarray to examine the gene expresssion profile and level of human naïve, Th1 and effector T cell subsets. PMID 22715389 GEOID GSE32901 AUTHORS Zhang W,Ferguson J,Ng SM,Hui K,Goh G,Lin A,Esplugues E,Flavell RA,Abraham C,Zhao H,Cho JH CONTRIBUTOR Jernej Godec CONTRIBUTOR_ORG Dana-Farber Cancer Institute EXACT_SOURCE GSE32901_3354_200_DN FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL SOURCE_MEMBERS 2310033P09Rik,2310046K01Rik,2810021B07Rik,4930412D23Rik,4930447F04Rik,4930565B19Rik,4930578C19Rik,4932411G14Rik,4933415A04Rik,9330129D05Rik,A230052G05Rik,ABAT,ACCN2,ACOT5,ADAM2,ADAM24,ADAMTS8,AF067063,ANG5,ANKS1B,ANLN,AOC3,ARHGAP8,ATP6V1G3,B230217C12Rik,BC016548,BCAS1,BEND4,BFSP1,BLNK,CCBE1,CCBL2,CCDC112,CCDC146,CCDC96,CCL4,CCNE1,CD68,CD74,CD79B,CD83,CDC20,CETN1,CKAP2L,CLEC12A,CLEC4F,CNTN4,COL22A1,COL5A2,CPD,CPNE5,CPZ,CSK,CTSJ,CXXC5,CYP2AB1,CYP2B10,D14ERTD668E,DEFB37,DLGAP5,DNAHC17,DNASE1L2,DTL,E2F7,EPB4.2,EXO1,FAIM3,FJX1,GALR1,GFRA1,GM10228,GM10386,GM10776,GM12794,GM14088,GM14496,GM15470,GM2060,GM4841,GM5087,GM5142,GM6236,GM6772,GM7278,GM7312,GM8655,GM8681,GM8773,GM9643,GRIA2,GUCA2B,H2-AA,H2-AB1,H2AFY3,HEPACAM2,HIST1H3D,HOXB13,HOXC5,IFI30,IFNA4,IFRD2,IGF1,INA,INHBA,JPH3,KCNMA1,KCNQ4,KLRE1,KRT36,KRT78,LACTB,LAT2,LOC100046275,LRCH2,LRRC3,LRRIQ1,MAST1,MILL1,MIR125A,MIR129-1,MIR384,MIR469,MIR680-2,MKI67,MMRN2,MRGPRA1,MSX2,MYBL2,MYL1,MYO1B,MYOM2,NANOG,NCF1,NFE2,NPFFR1,ODC1,OLFR1024,OLFR1093,OLFR1111,OLFR1115,OLFR1226,OLFR1241,OLFR1270,OLFR1306,OLFR1453,OLFR1512,OLFR482,OLFR623,OLFR984,PAFAH1B3,PEBP1,PEG12,PEO1,PLD4,PLG,PLP2,POLQ,PROM1,PTN,PTPRK,RGS16,RPS4Y2,RXFP3,SCGN,SEMA7A,SERPINA9,SERPINB1A,SFRS2,SHC4,SLC26A8,SLC38A4,SLC6A4,SLC8A3,SRM,SYT10,TAS2R121,TCF19,TDPOZ1,TEX24,TNC,TNFAIP6,TNFRSF13B,TNFRSF13C,TNFRSF9,TPX2,TRIP13,TSC22D3,TUBD1,TULP3,UBE2M,UNC93B1,UPK3B,VMN1R203,VMN1R211,VMN1R27,WDFY4,WFDC10,XIRP2,ZC3H10,ZFP558 GENE_SYMBOLS ,,,,,,,,,,,ABAT,ASIC1,,ADAM2,,ADAMTS8,,,ANKS1B,ANLN,AOC3,ARHGAP8,ATP6V1G3,,,BCAS1,BEND4,BFSP1,BLNK,CCBE1,KYAT3,CCDC112,CCDC146,CCDC96,CCL4,CCNE1,CD68,CD74,CD79B,CD83,CDC20,CETN1,CKAP2L,CLEC12A,CLEC4F,CNTN4,COL22A1,COL5A2,CPD,CPNE5,CPZ,CSK,,CXXC5,,,,,DLGAP5,,DNASE1L2,DTL,E2F7,,EXO1,FCMR,FJX1,GALR1,GFRA1,,,,,,,,,,,,,,,,,,,,GRIA2,GUCA2B,,,,HEPACAM2,H3C4,HOXB13,HOXC5,IFI30,IFNA4,IFRD2,IGF1,INA,INHBA,JPH3,KCNMA1,KCNQ4,,KRT36,KRT78,LACTB,LAT2,,LRCH2,LRRC3,LRRIQ1,MAST1,,MIR125A,MIR129-1,MIR384,,,MKI67,MMRN2,,MSX2,MYBL2,MYL1,MYO1B,MYOM2,NANOG,NCF1,NFE2,NPFFR1,ODC1,,,,,,,,,,,,,,PAFAH1B3,PEBP1,,TWNK,PLD4,PLG,PLP2,POLQ,PROM1,PTN,PTPRK,RGS16,RPS4Y2,RXFP3,SCGN,SEMA7A,SERPINA9,,SRSF2,SHC4,SLC26A8,SLC38A4,SLC6A4,SLC8A3,SRM,SYT10,,TCF19,,,TNC,TNFAIP6,TNFRSF13B,TNFRSF13C,TNFRSF9,TPX2,TRIP13,TSC22D3,TUBD1,TULP3,UBE2M,UNC93B1,UPK3B,,,,WDFY4,,XIRP2,ZC3H10, FOUNDER_NAMES