<?xml version="1.0" encoding="UTF-8" standalone="yes"?>

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     See license terms at www.gsea-msigdb.org/gsea/license_terms_list. Please note that certain gene sets have special access terms.
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<MSIGDB BUILD_DATE="Jan 29, 2026" VERSION="2026.1.Hs" NAME="export">
    <GENESET STANDARD_NAME="GSE339_CD4POS_VS_CD4CD8DN_DC_IN_CULTURE_DN" SYSTEMATIC_NAME="M5124" HISTORICAL_NAMES="" PMID="12816982" AUTHORS="Edwards AD,Chaussabel D,Tomlinson S,Schulz O,Sher A,Reis e Sousa C" GEOID="GSE339" EXACT_SOURCE="GSE339_1509_200_DN" GENESET_LISTING_URL="" EXTERNAL_DETAILS_URL="" CHIP="HUMAN_GENE_SYMBOL" CONTRIBUTOR="Jernej Godec" CONTRIBUTOR_ORG="Dana-Farber Cancer Institute" DESCRIPTION_BRIEF="Genes down-regulated in comparison of CD4 [GeneID=920] dendritic cells (DC) versus CD4- [GeneID=920] CD8- DCs." DESCRIPTION_FULL="The functional relationships and properties of different sub-types of dendritic cells (DC) remain largely undefined. We used a global gene profiling approach to determine gene expression patterns among murine splenic CD11c high DC subsets in an effort to better characterise these cells." TAGS="" MEMBERS="ACAA2,ACCN5,ACR,AKR1B15,ALPPL2,AMOT,ANKIB1,ANKRD1,ANLN,ANXA10,ANXA5,AP1M1,AP2A2,APAF1,APBB2,APOA5,ARIH2,ARX,ATP1B1,ATP5F1,ATXN7L3,B3GALT1,BAZ2A,BMP8B,BSCL2,C1QC,C1QTNF1,C5orf15,C7orf55,CALCB,CAPNS1,CAV3,CCL1,CENPK,CHL1,CIB1,CKMT2,CLDN7,COL4A2,COL6A2,COX5A,CSDA,CSNK2A2,CST3,CUEDC1,CYB5B,DARC,DCC,DCTN3,DDT,DDX19A,DHRS4,DMGDH,DOCK2,EIF4EBP2,EIF4ENIF1,EIF4G1,ENG,ERF,ERGIC3,ESYT1,F2,FABP9,FAM111A,FCGR2B,FGF3,FOSL1,FRAT1,GABRB2,GFER,GJC1,GLI1,GLRB,GNAI1,GP1BA,GPR172A,GPSM3,GPX3,GUSB,HAGH,HESX1,HGF,HNRNPK,HNRNPR,HNRNPUL2,HOMER3,HOXA10,HOXA11,IFNG,IL13RA2,IL2RB,IL4R,ISCA2,IYD,KANK3,KCNA2,KCNAB2,KCNH2,KCNJ12,KIF16B,KRT33B,LIPC,LSR,MACROD2,MAN1B1,MBP,MED12L,MEIR5,MEIS2,MID1,MID1IP1,MPRIP,MPV17,MRC1,MSH5,MYADM,MYCBP,NCOA1,NKX3-2,NPNT,NTN1,NUDT1,OR2H1,PAPSS1,PARN,PBRM1,PDAP1,PGK2,PHC1,PHOX2B,PKD2,PMPCA,PNN,POLR2L,POSTN,PPARD,PPIB,PRKD2,PTGES,PTPRG,PTPRN2,RAD1,RARA,REEP6,RGS6,RHOQ,RNF10,RNF138,RNF34,RNF6,RPAP1,RPE,RPL13A,RPL23A,RPL28,RRM2,SCEL,SCHIP1,SDSL,SELE,SFRP1,SLC12A5,SLC25A10,SLC35E4,SLC5A1,SLC7A8,SMAP2,SMPD1,SMYD5,SOX11,SP1,ST6GALNAC1,STAT3,STK10,SURF6,TACR2,TARBP2,TCL1A,TET1,TJP1,TM4SF5,TMEM234,TNFRSF19,TNFRSF21,TNNI2,TPRG1L,TRAIP,TRIM28,TRIM41,TRPC5,TSKU,TUBB6,TUBG2,TUFM,UMOD,UROD,UXS1,WNT11,ZFP37,ZIC4" MEMBERS_SYMBOLIZED="ACAA2,ACKR1,ACR,AKR1B15,ALPG,AMOT,ANKIB1,ANKRD1,ANLN,ANXA10,ANXA5,AP1M1,AP2A2,APAF1,APBB2,APOA5,ARIH2,ARX,ASIC5,ATP1B1,ATP5PB,ATXN7L3,B3GALT1,BAZ2A,BMP8B,BSCL2,C1QC,C1QTNF1,C5orf15,CALCB,CAPNS1,CAV3,CCL1,CENPK,CHL1,CIB1,CKMT2,CLDN7,COL4A2,COL6A2,COX5A,CSNK2A2,CST3,CUEDC1,CYB5B,DCC,DCTN3,DDT,DDX19A,DHRS4,DMGDH,DOCK2,EIF4EBP2,EIF4ENIF1,EIF4G1,ENG,ERF,ERGIC3,ESYT1,F2,FABP9,FAM111A,FCGR2B,FGF3,FMC1,FOSL1,FRAT1,GABRB2,GFER,GJC1,GLI1,GLRB,GNAI1,GP1BA,GPSM3,GPX3,GUSB,HAGH,HESX1,HGF,HNRNPK,HNRNPR,HNRNPUL2,HOMER3,HOXA10,HOXA11,IFNG,IL13RA2,IL2RB,IL4R,ISCA2,IYD,KANK3,KCNA2,KCNAB2,KCNH2,KCNJ12,KIF16B,KRT33B,LIPC,LSR,MACROD2,MAN1B1,MBP,MED12L,MEIS2,MID1,MID1IP1,MPRIP,MPV17,MRC1,MSH5,MYADM,MYCBP,NCOA1,NKX3-2,NPNT,NTN1,NUDT1,OR2H1,PAPSS1,PARN,PBRM1,PDAP1,PGK2,PHC1,PHOX2B,PKD2,PMPCA,PNN,POLR2L,POSTN,PPARD,PPIB,PRKD2,PTGES,PTPRG,PTPRN2,RAD1,RARA,REEP6,RGS6,RHOQ,RNF10,RNF138,RNF34,RNF6,RPAP1,RPE,RPL13A,RPL23A,RPL28,RRM2,SCEL,SCHIP1,SDSL,SELE,SFR1,SFRP1,SLC12A5,SLC25A10,SLC35E4,SLC52A2,SLC5A1,SLC7A8,SMAP2,SMPD1,SMYD5,SOX11,SP1,ST6GALNAC1,STAT3,STK10,SURF6,TACR2,TARBP2,TCL1A,TET1,TJP1,TM4SF5,TMEM234,TNFRSF19,TNFRSF21,TNNI2,TPRG1L,TRAIP,TRIM28,TRIM41,TRPC5,TSKU,TUBB6,TUBG2,TUFM,UMOD,UROD,UXS1,WNT11,YBX3,ZFP37,ZIC4" MEMBERS_EZID="10023,10052,10155,10236,10293,10322,10425,10449,10519,10631,10752,10901,11176,11199,11253,11258,11333,113675,114897,1160,116519,116931,119392,122961,127262,1284,1292,1366,140733,1459,1468,1471,154791,154796,161,1630,1652,170302,1794,1911,1979,1981,2022,2077,2147,221092,2213,2248,23164,23203,23344,23428,23433,23521,251,2532,255743,2561,256949,25865,25987,26015,26292,26580,2671,26716,27063,27175,27242,2735,2743,2770,2811,2878,2990,29958,29970,3029,308,3082,317,3190,3206,3207,323,339665,3458,3560,3566,3598,3737,3757,3768,3884,389434,3990,404093,4155,4212,4281,4358,4360,441282,4439,4521,481,49,5073,51444,515,51599,51614,51802,5232,5311,5411,5441,54443,54467,5467,5479,55193,55308,55504,55614,55808,56063,56478,56951,56970,57468,579,5793,5799,5810,58526,5914,6049,6120,6147,6158,6241,6346,63901,63940,6401,64105,6422,646480,64744,6523,656,6609,6664,6667,6774,6793,6838,6865,6895,7082,7136,714,7224,7284,7369,7389,7481,7539,79581,797,80146,80196,80312,8061,80777,8115,826,84107,84617,8514,8531,859,8648,8708,8796,8820,8907,8929,9032,9061,90933,91663,92840,9377,9423,9454,9536,9628,9921" MEMBERS_MAPPING="ACAA2,ACAA2,10449|ACCN5,ASIC5,51802|ACR,ACR,49|AKR1B15,AKR1B15,441282|ALPPL2,ALPG,251|AMOT,AMOT,154796|ANKIB1,ANKIB1,54467|ANKRD1,ANKRD1,27063|ANLN,ANLN,54443|ANXA10,ANXA10,11199|ANXA5,ANXA5,308|AP1M1,AP1M1,8907|AP2A2,AP2A2,161|APAF1,APAF1,317|APBB2,APBB2,323|APOA5,APOA5,116519|ARIH2,ARIH2,10425|ARX,ARX,170302|ATP1B1,ATP1B1,481|ATP5F1,ATP5PB,515|ATXN7L3,ATXN7L3,56970|B3GALT1,B3GALT1,8708|BAZ2A,BAZ2A,11176|BMP8B,BMP8B,656|BSCL2,BSCL2,26580|C1QC,C1QC,714|C1QTNF1,C1QTNF1,114897|C5orf15,C5orf15,56951|C7orf55,FMC1,154791|CALCB,CALCB,797|CAPNS1,CAPNS1,826|CAV3,CAV3,859|CCL1,CCL1,6346|CENPK,CENPK,64105|CHL1,CHL1,10752|CIB1,CIB1,10519|CKMT2,CKMT2,1160|CLDN7,CLDN7,1366|COL4A2,COL4A2,1284|COL6A2,COL6A2,1292|COX5A,COX5A,9377|CSDA,YBX3,8531|CSNK2A2,CSNK2A2,1459|CST3,CST3,1471|CUEDC1,CUEDC1,404093|CYB5B,CYB5B,80777|DARC,ACKR1,2532|DCC,DCC,1630|DCTN3,DCTN3,11258|DDT,DDT,1652|DDX19A,DDX19A,55308|DHRS4,DHRS4,10901|DMGDH,DMGDH,29958|DOCK2,DOCK2,1794|EIF4EBP2,EIF4EBP2,1979|EIF4ENIF1,EIF4ENIF1,56478|EIF4G1,EIF4G1,1981|ENG,ENG,2022|ERF,ERF,2077|ERGIC3,ERGIC3,51614|ESYT1,ESYT1,23344|F2,F2,2147|FABP9,FABP9,646480|FAM111A,FAM111A,63901|FCGR2B,FCGR2B,2213|FGF3,FGF3,2248|FOSL1,FOSL1,8061|FRAT1,FRAT1,10023|GABRB2,GABRB2,2561|GFER,GFER,2671|GJC1,GJC1,10052|GLI1,GLI1,2735|GLRB,GLRB,2743|GNAI1,GNAI1,2770|GP1BA,GP1BA,2811|GPR172A,SLC52A2,79581|GPSM3,GPSM3,63940|GPX3,GPX3,2878|GUSB,GUSB,2990|HAGH,HAGH,3029|HESX1,HESX1,8820|HGF,HGF,3082|HNRNPK,HNRNPK,3190|HNRNPR,HNRNPR,10236|HNRNPUL2,HNRNPUL2,221092|HOMER3,HOMER3,9454|HOXA10,HOXA10,3206|HOXA11,HOXA11,3207|IFNG,IFNG,3458|IL13RA2,IL13RA2,3598|IL2RB,IL2RB,3560|IL4R,IL4R,3566|ISCA2,ISCA2,122961|IYD,IYD,389434|KANK3,KANK3,256949|KCNA2,KCNA2,3737|KCNAB2,KCNAB2,8514|KCNH2,KCNH2,3757|KCNJ12,KCNJ12,3768|KIF16B,KIF16B,55614|KRT33B,KRT33B,3884|LIPC,LIPC,3990|LSR,LSR,51599|MACROD2,MACROD2,140733|MAN1B1,MAN1B1,11253|MBP,MBP,4155|MED12L,MED12L,116931|MEIR5,SFR1,119392|MEIS2,MEIS2,4212|MID1,MID1,4281|MID1IP1,MID1IP1,58526|MPRIP,MPRIP,23164|MPV17,MPV17,4358|MRC1,MRC1,4360|MSH5,MSH5,4439|MYADM,MYADM,91663|MYCBP,MYCBP,26292|NCOA1,NCOA1,8648|NKX3-2,NKX3-2,579|NPNT,NPNT,255743|NTN1,NTN1,9423|NUDT1,NUDT1,4521|OR2H1,OR2H1,26716|PAPSS1,PAPSS1,9061|PARN,PARN,5073|PBRM1,PBRM1,55193|PDAP1,PDAP1,11333|PGK2,PGK2,5232|PHC1,PHC1,1911|PHOX2B,PHOX2B,8929|PKD2,PKD2,5311|PMPCA,PMPCA,23203|PNN,PNN,5411|POLR2L,POLR2L,5441|POSTN,POSTN,10631|PPARD,PPARD,5467|PPIB,PPIB,5479|PRKD2,PRKD2,25865|PTGES,PTGES,9536|PTPRG,PTPRG,5793|PTPRN2,PTPRN2,5799|RAD1,RAD1,5810|RARA,RARA,5914|REEP6,REEP6,92840|RGS6,RGS6,9628|RHOQ,RHOQ,23433|RNF10,RNF10,9921|RNF138,RNF138,51444|RNF34,RNF34,80196|RNF6,RNF6,6049|RPAP1,RPAP1,26015|RPE,RPE,6120|RPL13A,RPL13A,23521|RPL23A,RPL23A,6147|RPL28,RPL28,6158|RRM2,RRM2,6241|SCEL,SCEL,8796|SCHIP1,SCHIP1,29970|SDSL,SDSL,113675|SELE,SELE,6401|SFRP1,SFRP1,6422|SLC12A5,SLC12A5,57468|SLC25A10,SLC25A10,1468|SLC35E4,SLC35E4,339665|SLC5A1,SLC5A1,6523|SLC7A8,SLC7A8,23428|SMAP2,SMAP2,64744|SMPD1,SMPD1,6609|SMYD5,SMYD5,10322|SOX11,SOX11,6664|SP1,SP1,6667|ST6GALNAC1,ST6GALNAC1,55808|STAT3,STAT3,6774|STK10,STK10,6793|SURF6,SURF6,6838|TACR2,TACR2,6865|TARBP2,TARBP2,6895|TCL1A,TCL1A,8115|TET1,TET1,80312|TJP1,TJP1,7082|TM4SF5,TM4SF5,9032|TMEM234,TMEM234,56063|TNFRSF19,TNFRSF19,55504|TNFRSF21,TNFRSF21,27242|TNNI2,TNNI2,7136|TPRG1L,TPRG1L,127262|TRAIP,TRAIP,10293|TRIM28,TRIM28,10155|TRIM41,TRIM41,90933|TRPC5,TRPC5,7224|TSKU,TSKU,25987|TUBB6,TUBB6,84617|TUBG2,TUBG2,27175|TUFM,TUFM,7284|UMOD,UMOD,7369|UROD,UROD,7389|UXS1,UXS1,80146|WNT11,WNT11,7481|ZFP37,ZFP37,7539|ZIC4,ZIC4,84107" FILTERED_BY_SIMILARITY="" FOUNDER_NAMES="" REFINEMENT_DATASETS="" VALIDATION_DATASETS="" CATEGORY_CODE="C7" ORGANISM="Mus musculus" SUB_CATEGORY_CODE="IMMUNESIGDB"/>
</MSIGDB>
