STANDARD_NAME GSE34205_HEALTHY_VS_RSV_INF_INFANT_PBMC_UP SYSTEMATIC_NAME M5136 COLLECTION C7:IMMUNESIGDB MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/GSE34205_HEALTHY_VS_RSV_INF_INFANT_PBMC_UP NAMESPACE HUMAN_GENE_SYMBOL DESCRIPTION_BRIEF Genes up-regulated in comparison of peripheral blood mononuclear cells (PBMC) from healthy donors versus PBMCs from infanct with acute RSV infection. DESCRIPTION_FULL To study the transcriptional profile of patients with acute RSV or Influenza infection,children of median age 2.4 months (range 1.5-8.6) hospitalized with acute RSV and influenza virus infection were offered study enrollment after microbiologic confirmation of the diagnosis. Blood samples were collected from them within 42-72 hours of hospitalization. We excluded children with suspected or proven polymicrobial infections, with underlying chronic medical conditions (i.e congenital heart disease, renal insufficiency), with immunodeficiency, or those who received systemic steroids or other immunomodulatory therapies. The RSV cohort consisted of 51 patients with median age of 2 months (range 1.5-3.9) and the influenza cohort had 28 patients with median age of 5.5 months (range 1.4-21). Control samples were obtained from healthy children undergoing elective surgical procedures or at outpatient clinic visits. To exclude viral co-infections we performed nasopharyngeal viral cultures of all subjects. We recruited 10 control patients for the RSV cohort with median age of 6.7 months (range 5-10), and 12 control patients for the influenza cohort with median age of18.5 months (range 10.5-26). PMID 22398282 GEOID GSE34205 AUTHORS Ioannidis I,McNally B,Willette M,Peeples ME,Chaussabel D,Durbin JE,Ramilo O,Mejias A,FlaƱo E CONTRIBUTOR Jernej Godec CONTRIBUTOR_ORG Dana-Farber Cancer Institute EXACT_SOURCE GSE34205_2334_200_UP FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL SOURCE_MEMBERS ABCB1,ABHD15,ACO1,ADRB2,AKAP12,AKR1B1,AKR1C3,AKT3,ALDH16A1,ALDH1A1,AMIGO1,ANKH,ARAP1,ARHGAP30,ARHGAP9,BACE2,BBS4,BBX,BNC2,C10orf128,C11orf2,C19orf43,C1orf21,C5orf20,CBX7,CCR3,CD160,CD244,CEP104,CIITA,CLEC4C,CLIC3,CLSTN1,CNNM3,COMMD6,CPA3,CTSZ,CXorf57,DBP,DRG2,EEF1G,EIF2C1,EIF3L,EIF4B,EMR3,EOMES,FAM108A1,FAM43A,FBL,FBXL17,FCER1A,FCRL3,FGFBP2,FLJ39639,FZD3,GLG1,GLTSCR2,GNB2L1,GNLY,GOSR2,GPR44,GPR56,HDC,HIF1AN,HIPK2,HLA-DPB1,HTATSF1,IL16,IL18BP,IL2RB,IL7,IMPAD1,ITGB7,KIAA0182,KIAA1147,KIAA1377,KIAA1530,KIAA1671,KIF21A,KIF3A,KIR2DL3,KLRB1,KLRD1,KLRK1,LGR6,LILRA4,LMO7,LOC100130872,LOC100288410,LOC100288656,LOC100288673,LOC150381,LOC200772,LOC285972,LOC286087,LPXN,LRP8,LTBP3,MAPK1,MAST3,MBD4,MBP,MEAF6,MIR101-1,MPHOSPH8,MRC1,MXD4,MYBL1,NACA,NCALD,NCOA3,NELL2,NONO,NR3C2,NRCAM,NUMA1,P2RY8,PABPC4,PIAS1,PLEKHF1,POTEKP,PPP1R3E,PPTC7,PRF1,PRKRIR,PRR5L,PRSS23,PTDSS1,PTGDR,PTPN4,QARS,RFTN1,RGS19,RNPC3,RPL10,RPL18,RPL19,RPL21,RPL27,RPL3,RPL30,RPL35,RPL36A,RPL4,RPL8,RPS10,RPS18,RPS23,RPS28,RPS3,RTN1,S1PR5,SBK1,SCRN1,SELM,SFI1,SFN,SGPP1,SH2D1B,SLAMF6,SNRNP70,SPN,SPON2,SRGAP2,ST13,STMN3,SUN2,SYNE1,TAF3,TBC1D10C,TGFBR3,TGS1,THAP11,THEM4,TIGIT,TMED4,TMEM134,TRD@,TRIM27,TRIM28,TSEN54,TTC31,TUFM,TULP4,UBA52,UBE2Z,UBN1,UQCRB,VRK3,WDR73,YPEL1,YY1,ZAP70,ZHX2,ZMYND11,ZNF169,ZNF264,ZNF577,ZNF641,ZNF785 GENE_SYMBOLS ABCB1,ABHD15,ACO1,ADRB2,AKAP12,AKR1B1,AKR1C3,AKT3,ALDH16A1,ALDH1A1,AMIGO1,ANKH,ARAP1,ARHGAP30,ARHGAP9,BACE2,BBS4,BBX,BNC2,TMEM273,VPS51,TRIR,C1orf21,DCANP1,CBX7,CCR3,CD160,CD244,CEP104,CIITA,CLEC4C,CLIC3,CLSTN1,CNNM3,COMMD6,CPA3,CTSZ,RADX,DBP,DRG2,EEF1G,AGO1,EIF3L,EIF4B,ADGRE3,EOMES,ABHD17A,FAM43A,FBL,FBXL17,FCER1A,FCRL3,FGFBP2,LINC00921,FZD3,GLG1,NOP53,RACK1,GNLY,GOSR2,PTGDR2,ADGRG1,HDC,HIF1AN,HIPK2,HLA-DPB1,HTATSF1,IL16,IL18BP,IL2RB,IL7,BPNT2,ITGB7,GSE1,DENND11,CEP126,UVSSA,KIAA1671,KIF21A,KIF3A,KIR2DL3,KLRB1,KLRD1,KLRK1,LGR6,LILRA4,LMO7,,,,,PRR34-AS1,UICLM,LINC00996,,LPXN,LRP8,LTBP3,MAPK1,MAST3,MBD4,MBP,MEAF6,MIR101-1,MPHOSPH8,MRC1,MXD4,MYBL1,NACA,NCALD,NCOA3,NELL2,NONO,NR3C2,NRCAM,NUMA1,P2RY8,PABPC4,PIAS1,PLEKHF1,POTEKP,PPP1R3E,PPTC7,PRF1,THAP12,PRR5L,PRSS23,PTDSS1,PTGDR,PTPN4,EPRS1,RFTN1,RGS19,RNPC3,RPL10,RPL18,RPL19,RPL21,RPL27,RPL3,RPL30,RPL35,RPL36A,RPL4,RPL8,RPS10,RPS18,RPS23,RPS28,RPS3,RTN1,S1PR5,SBK1,SCRN1,SELENOM,SFI1,SFN,SGPP1,SH2D1B,SLAMF6,SNRNP70,SPN,SPON2,SRGAP2,ST13,STMN3,SUN2,SYNE1,TAF3,TBC1D10C,TGFBR3,TGS1,THAP11,THEM4,TIGIT,TMED4,TMEM134,,TRIM27,TRIM28,TSEN54,TTC31,TUFM,TULP4,UBA52,UBE2Z,UBN1,UQCRB,VRK3,WDR73,YPEL1,YY1,ZAP70,ZHX2,ZMYND11,ZNF169,ZNF264,ZNF577,ZNF641,ZNF785 FOUNDER_NAMES