STANDARD_NAME GSE37416_CTRL_VS_6H_F_TULARENSIS_LVS_NEUTROPHIL_UP SYSTEMATIC_NAME M5332 COLLECTION C7:IMMUNESIGDB MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/GSE37416_CTRL_VS_6H_F_TULARENSIS_LVS_NEUTROPHIL_UP NAMESPACE HUMAN_GENE_SYMBOL DESCRIPTION_BRIEF Genes up-regulated in comparison of control polymorphonuclear leukocytes (PMN) at 6 h versus PMN treated with F. tularensis vaccine at 6 h. DESCRIPTION_FULL We demonstrated recently that both constitutive and FAS-triggered apoptosis of human neutrophils are profoundly impaired by Francisella tularensis, but how this is achieved is largely unknown. To test the hypothesis that changes in neutrophil gene expression contribute to this phenotype, we used human oligonucleotide microarrays to identify differentially regulated genes in cells infected with F. tularensis strain LVS compared with uninfected controls. In order to examine the effect of F. tularensis on the neutrophil transcriptome, we performed microarray expression analysis on human neutrophils treated with F. tularensis subsp. holarctica live vaccine strain (LVS). PMID 22986450 GEOID GSE37416 AUTHORS Schwartz JT,Bandyopadhyay S,Kobayashi SD,McCracken J,Whitney AR,Deleo FR,Allen LA CONTRIBUTOR Jernej Godec CONTRIBUTOR_ORG Dana-Farber Cancer Institute EXACT_SOURCE GSE37416_2052_200_UP FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL SOURCE_MEMBERS ABCC5,ABHD2,ABHD3,AIDA,AMN1,ANKRD32,APPL2,ARHGAP19,ATG2B,ATP6AP2,ATP6V0B,BCAP31,BICD2,BRI3BP,BRP44,C12orf35,C14orf129,C1orf55,C20orf197,C7orf23,C7orf41,CARD6,CASP2,CASP3,CCNY,CD46,CEBPD,CEP44,CHMP1B,CHST14,CHUK,CMTM4,CNOT6,CTBS,CUL4B,DDX28,DEF8,DGCR2,DHRS9,DHTKD1,DKFZP586I1420,DPEP2,DPY30,DSTYK,DUS2L,EED,EMR2,EVI2A,EXTL3,FAM101B,FAM13B,FAM174A,FAM26F,FAM43A,FAM53B,FAM78A,FAM91A1,FDFT1,FGFR1OP,FIG4,FKRP,FLJ10038,FLJ39051,FLJ39653,FUNDC1,G6PD,GALNT1,GLRX2,GNB4,GPR27,GPR77,GRAMD1C,GSK3B,GTF3C1,HDAC1,HEATR5A,HERC1,HHEX,HIST1H2BI,HNRNPUL1,HSPA8,HVCN1,ICAM3,ICT1,IDH1,IKBKAP,IMPA2,INPP5B,ISL2,ITGAE,JPX,KCNE3,KCTD12,KIAA0040,KIAA0146,KIAA0232,KIAA0930,KIF21B,KLHDC2,KLHL7,LAMP2,LCLAT1,LIMD2,LIX1L,LNX2,LOC100130837,LOC100505702,LOC152217,LOC153546,LOC645158,LRP10,MAP3K3,MAP7,MAVS,MBIP,ME2,MED25,MIR21,MLXIP,MPPE1,MPZL1,MSL3,MSRB2,MTM1,MTMR12,NAA10,NCK1,NCKAP1L,NDC80,NDUFA2,NDUFB1,NFATC3,NLRP12,NSFL1C,NT5C,NUDT3,PDE3B,PDLIM2,PGD,PKN2,PRDX3,PRPF38B,PTRH2,QARS,RAB37,RABAC1,RABIF,RASGEF1A,RASSF1,RFC2,RFC3,RFK,RGS18,RNF114,RPGRIP1,RPS16P5,RPS6KB2,SDC2,SERINC5,SGPP1,SLC16A5,SLC19A1,SLC22A15,SLC25A20,SLC25A3,SLC25A44,SLC38A2,SLC40A1,SLMAP,ST3GAL6,STK4,SUCNR1,TACC1,TAX1BP3,TBC1D14,TCHP,TCP11L2,TGFBR2,TIGD1,TIGD3,TLR1,TLR6,TMEM219,TMEM55A,TOP3A,TSPYL4,TWF2,UBE4B,UBN1,UGGT1,VPS54,XPO7,XYLT1,ZC3H13,ZMAT2,ZMPSTE24,ZNF516,ZNF518B,ZNF688,ZNF75D GENE_SYMBOLS ABCC5,ABHD2,ABHD3,AIDA,AMN1,SLF1,APPL2,ARHGAP19,ATG2B,ATP6AP2,ATP6V0B,BCAP31,BICD2,BRI3BP,MPC2,RESF1,GSKIP,SDE2,LINC02910,TMEM243,MTURN,CARD6,CASP2,CASP3,CCNY,CD46,CEBPD,CEP44,CHMP1B,CHST14,CHUK,CMTM4,CNOT6,CTBS,CUL4B,DDX28,DEF8,DGCR2,DHRS9,DHTKD1,,DPEP2,DPY30,DSTYK,DUS2,EED,ADGRE2,EVI2A,EXTL3,RFLNB,FAM13B,FAM174A,CALHM6,FAM43A,FAM53B,FAM78A,FAM91A1,FDFT1,CEP43,FIG4,FKRP,GABPB1-IT1,GSEC,TAPT1-AS1,FUNDC1,G6PD,GALNT1,GLRX2,GNB4,GPR27,C5AR2,GRAMD1C,GSK3B,GTF3C1,HDAC1,HEATR5A,HERC1,HHEX,H2BC10,HNRNPUL1,HSPA8,HVCN1,ICAM3,MRPL58,IDH1,ELP1,IMPA2,INPP5B,ISL2,ITGAE,JPX,KCNE3,KCTD12,KIAA0040,SPIDR,KIAA0232,KIAA0930,KIF21B,KLHDC2,KLHL7,LAMP2,LCLAT1,LIMD2,LIX1L,LNX2,,LINC01094,NCBP2AS2,,CBX3P2,LRP10,MAP3K3,MAP7,MAVS,MBIP,ME2,MED25,MIR21,MLXIP,MPPE1,MPZL1,MSL3,MSRB2,MTM1,MTMR12,NAA10,NCK1,NCKAP1L,NDC80,NDUFA2,NDUFB1,NFATC3,NLRP12,NSFL1C,NT5C,NUDT3,PDE3B,PDLIM2,PGD,PKN2,PRDX3,PRPF38B,PTRH2,EPRS1,RAB37,RABAC1,RABIF,RASGEF1A,RASSF1,RFC2,RFC3,RFK,RGS18,RNF114,RPGRIP1,RPS16P5,RPS6KB2,SDC2,SERINC5,SGPP1,SLC16A5,SLC19A1,SLC22A15,SLC25A20,SLC25A3,SLC25A44,SLC38A2,SLC40A1,SLMAP,ST3GAL6,STK4,SUCNR1,TACC1,TAX1BP3,TBC1D14,TCHP,TCP11L2,TGFBR2,TIGD1,TIGD3,TLR1,TLR6,TMEM219,PIP4P2,TOP3A,TSPYL4,TWF2,UBE4B,UBN1,UGGT1,VPS54,XPO7,XYLT1,ZC3H13,ZMAT2,ZMPSTE24,ZNF516,ZNF518B,ZNF688,ZNF75D FOUNDER_NAMES