STANDARD_NAME GSE39820_TGFBETA1_VS_TGFBETA3_IN_IL6_TREATED_CD4_TCELL_UP SYSTEMATIC_NAME M5623 COLLECTION C7:IMMUNESIGDB MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/GSE39820_TGFBETA1_VS_TGFBETA3_IN_IL6_TREATED_CD4_TCELL_UP NAMESPACE HUMAN_GENE_SYMBOL DESCRIPTION_BRIEF Genes up-regulated in comparison of CD4 [GeneID=920] T cells treated with TGFB1 [GeneID=7040] versus those treated with TGFB3 [GeneID=7043] and IL6 [GeneID=3569]. DESCRIPTION_FULL TGF-beta3 produced by developing Th17 cells induces highly pathogenic T cells that are functionally and molecularly distinct from TGF-beta1-induced Th17 cells. The microarray data represent a distinct molecular signature for pathogenic versus non-pathogenic Th17 cells. PMID 22961052 GEOID GSE39820 AUTHORS Lee Y,Awasthi A,Yosef N,Quintana FJ,Xiao S,Peters A,Wu C,Kleinewietfeld M,Kunder S,Hafler DA,Sobel RA,Regev A,Kuchroo VK CONTRIBUTOR Jernej Godec CONTRIBUTOR_ORG Dana-Farber Cancer Institute EXACT_SOURCE GSE39820_1564_200_UP FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL SOURCE_MEMBERS ACAT2,ACOT11,ACOX1,ACSL3,ACVR1,ADNP2,ADO,AKT3,AMFR,ANKRD33,AP2B1,ARF1,ARFGAP2,ARID2,ARL6IP6,ATF1,ATP11C,ATP2C1,ATP6V1D,ATXN10,ATXN7L1,BCR,BICD2,BMPR2,BTAF1,C14orf166,C2orf69,C3orf38,C4orf29,C5orf33,C5orf44,CADM4,CAPZA1,CAPZA2,CASD1,CBFB,CDC14B,CDC42SE1,CDS2,CHORDC1,CHRAC1,CLCN6,CLIP1,CNTROB,CORO7,CPNE3,CSNK2A2,CSTF2,CTNNA1,CTNNB1,CXorf56,CYTH1,DCK,DCTN1,DDX5,DDX54,DDX59,DEDD,DENND4A,DNAH12,DNAJB5,DR1,E2F7,ERBB2IP,ERN1,EXOC5,FAM20B,FAM91A1,FAR1,FCHSD2,FLI1,FTO,G3BP2,GDI2,GKAP1,GPAM,GPC3,HADHB,HERC4,HOMER1,HOXD13,HRH3,HSF4,HSPA13,IFI35,IFT74,IKBKAP,IKZF5,INTS1,IQGAP1,ITCH,ITFG3,KAT2B,KBTBD8,KIAA0317,KIAA1826,KLF9,KRAS,LDLRAD3,LIMA1,LPGAT1,LRIF1,LSM14A,LYPLA1,MAN1A2,MAP3K1,MAP3K4,MAPK9,MAPRE1,MARCH7,MFF,MGAT4B,MTDH,MTHFD1L,MTMR7,NAA16,NAB1,NCOA6,NPPA,NR2F6,NRIP2,NT5DC3,NUP153,ORC3,OXCT1,P2RY10,PAIP1,PAPSS1,PARD6G,PBX3,PHF7,POFUT1,POP1,PPP1CC,PRICKLE3,PTPN12,PTPRA,QKI,RBM10,RBM18,RBM27,REXO4,RGN,RIC8A,RILPL1,RNF139,RNF185,RNF4,RNPC3,RSPRY1,SCYL1,SERINC5,SET,SH3YL1,SLC16A1,SLC20A1,SLC25A46,SLC29A2,SLC2A1,SLC33A1,SLC39A6,SMAD3,SMARCD2,SNAP23,SNX16,SOAT1,SPATA5,SPRED1,STT3B,STX1A,STYX,SYNPO2,TGFBR2,THUMPD3,TIAM1,TIGD2,TLK1,TM9SF3,TMEM127,TMEM55A,TNK2,TOX4,TPM3,TRPC1,TSPYL1,TSR1,TTC13,TTLL11,UBE2H,UBE4B,UBL3,UTP18,VPS8,XPOT,YAF2,YWHAB,YWHAZ,ZHX1,ZNF451,ZNF655 GENE_SYMBOLS ACAT2,ACOT11,ACOX1,ACSL3,ACVR1,ADNP2,ADO,AKT3,AMFR,ANKRD33,AP2B1,ARF1,ARFGAP2,ARID2,ARL6IP6,ATF1,ATP11C,ATP2C1,ATP6V1D,ATXN10,ATXN7L1,BCR,BICD2,BMPR2,BTAF1,RTRAF,C2orf69,C3orf38,ABHD18,NADK2,TRAPPC13,CADM4,CAPZA1,CAPZA2,CASD1,CBFB,CDC14B,CDC42SE1,CDS2,CHORDC1,CHRAC1,CLCN6,CLIP1,CNTROB,CORO7,CPNE3,CSNK2A2,CSTF2,CTNNA1,CTNNB1,STEEP1,CYTH1,DCK,DCTN1,DDX5,DDX54,DDX59,DEDD,DENND4A,DNAH12,DNAJB5,DR1,E2F7,ERBIN,ERN1,EXOC5,FAM20B,FAM91A1,FAR1,FCHSD2,FLI1,FTO,G3BP2,GDI2,GKAP1,GPAM,GPC3,HADHB,HERC4,HOMER1,HOXD13,HRH3,HSF4,HSPA13,IFI35,IFT74,ELP1,IKZF5,INTS1,IQGAP1,ITCH,FAM234A,KAT2B,KBTBD8,AREL1,MSANTD4,KLF9,KRAS,LDLRAD3,LIMA1,LPGAT1,LRIF1,LSM14A,LYPLA1,MAN1A2,MAP3K1,MAP3K4,MAPK9,MAPRE1,MARCHF7,MFF,MGAT4B,MTDH,MTHFD1L,MTMR7,NAA16,NAB1,NCOA6,NPPA,NR2F6,NRIP2,NT5DC3,NUP153,ORC3,OXCT1,P2RY10,PAIP1,PAPSS1,PARD6G,PBX3,PHF7,POFUT1,POP1,PPP1CC,PRICKLE3,PTPN12,PTPRA,QKI,RBM10,RBM18,RBM27,REXO4,RGN,RIC8A,RILPL1,RNF139,RNF185,RNF4,RNPC3,RSPRY1,SCYL1,SERINC5,SET,SH3YL1,SLC16A1,SLC20A1,SLC25A46,SLC29A2,SLC2A1,SLC33A1,SLC39A6,SMAD3,SMARCD2,SNAP23,SNX16,SOAT1,SPATA5,SPRED1,STT3B,STX1A,STYX,SYNPO2,TGFBR2,THUMPD3,TIAM1,TIGD2,TLK1,TM9SF3,TMEM127,PIP4P2,TNK2,TOX4,TPM3,TRPC1,TSPYL1,TSR1,TTC13,TTLL11,UBE2H,UBE4B,UBL3,UTP18,VPS8,XPOT,YAF2,YWHAB,YWHAZ,ZHX1,ZNF451,ZNF655 FOUNDER_NAMES