STANDARD_NAME GSE5589_LPS_AND_IL10_VS_LPS_AND_IL6_STIM_MACROPHAGE_45MIN_UP SYSTEMATIC_NAME M6613 COLLECTION C7:IMMUNESIGDB MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/GSE5589_LPS_AND_IL10_VS_LPS_AND_IL6_STIM_MACROPHAGE_45MIN_UP NAMESPACE HUMAN_GENE_SYMBOL DESCRIPTION_BRIEF Genes up-regulated in bone marrow-derived macrophages (45 min): IL10 [GeneID=3486] and LPS versus IL6 [GeneID=3469] and LPS. DESCRIPTION_FULL IL-10 or IL-6 stimulation of control 129xC57BL/6 murine bone marrow derived macrophages in the presence of LPS. We used microarrays to detail the global programme of gene expression changes in response to IL-6 or IL-10 stimulation in the presence of lipopolysaccharide. BMDMs were isolated from control, IL-6-/-, and IL-10-/- mice on a 129XBL/6 mixed background mice and differentiated in the presence of CSF-1 for 6-7 days. Cells were scraped and plated in 6 well plates at 2x10e6/well. Cells were washed with complete DMEM and rested for 1-2 hr before stimulation with combinations of IL-10 (10 ng/ml), IL-6 (2 ng/ml) or LPS (100 ng/ml) for 45 min or 180 mins. Complete biological replicates were performed. PMID 17114459 GEOID GSE5589 AUTHORS El Kasmi KC,Holst J,Coffre M,Mielke L,de Pauw A,Lhocine N,Smith AM,Rutschman R,Kaushal D,Shen Y,Suda T,Donnelly RP,Myers MG Jr,Alexander W,Vignali DA,Watowich SS,Ernst M,Hilton DJ,Murray PJ CONTRIBUTOR Jernej Godec CONTRIBUTOR_ORG Dana-Farber Cancer Institute EXACT_SOURCE GSE5589_2998_200_UP FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL SOURCE_MEMBERS ABCC1,ABCD1,ACADS,AFF4,AIFM2,ALDOC,ANKRD28,APPL2,APRT,ARHGAP23,ARHGAP31,ASL,ASXL2,ATG2A,ATMIN,ATP2B1,ATP6V1E1,AZI1,BAHD1,BBS7,BCAS3,BEX1,BLOC1S3,C10orf2,C12orf44,C15orf61,C18orf19,C1orf198,C1orf216,C3orf33,C5orf44,C6orf103,C6orf57,C6orf72,C7orf50,CALCOCO1,CBY1,CD99L2,CDC42BPB,CDKL2,CDKN1B,CDS1,CGRRF1,CNOT8,CRTAP,CTSB,CUL7,CXorf38,CYP27A1,CYTH3,DALRD3,DAND5,DCTPP1,DENND4C,DIP2B,DOCK4,EEF2,EIF2AK4,EIF2C3,ERBB2IP,ERI3,ETV1,FAM195A,FAM54B,FAM92A1,FBXL20,FBXW4,FIG4,FMO5,FOXN3,FOXO3,FUCA1,GALNT4,GATC,GDPD3,GLIS3,GPHN,GPS2,GSTM5,GTF3C1,HCFC1R1,HEATR5B,HPS4,HRSP12,HYAL2,IKBKG,INVS,IRAK4,IRGQ,KBTBD13,KBTBD2,KIAA0753,KIAA1522,KLHDC10,KPNA6,KRT10,LEPREL2,LRRC57,LRSAM1,MAGEE1,MAN1C1,MCEE,MRPS15,MTMR10,MZT2B,NAT9,NENF,NEU1,NF1,NFIC,NKIRAS2,OLFML3,OXSM,P2RY6,PACRG,PACS2,PANK1,PAQR3,PEPD,PEX5,PEX7,PGAP1,PHF1,PIAS3,PIKFYVE,PIP4K2A,PIR,PKD1,PPOX,PPP1R3B,PRDX2,PRKCI,PRRG1,PTPRS,PTS,QKI,RAGE,RASSF3,RCBTB2,RELL1,RNF103,RNF144B,RNF149,RNF166,RNF180,RNLS,RWDD2A,RXRB,SAMD4B,SECISBP2L,SETX,SLC25A1,SLC25A39,SLC25A46,SLC2A12,SMAP1,SNAP47,SNX33,SORBS3,SPA17,SPATA6,SPG11,SPTAN1,SQLE,SQRDL,STOM,TBC1D10A,TCF12,TCF4,TEX264,TF,TFDP2,TGFBR2,TM2D2,TM6SF1,TMCO3,TMED1,TMEM159,TMEM183A,TMEM205,TMEM37,TMX4,TOM1,TPCN1,TPK1,TRAM1,TRAPPC10,TRIM65,TRMT1,TRPM7,TTC38,UNC93B1,VPS33B,WDR26,WDR45,WDR5B,ZDHHC20,ZFAND1,ZFAND2A,ZNF746 GENE_SYMBOLS ABCC1,ABCD1,ACADS,AFF4,AIFM2,ALDOC,ANKRD28,APPL2,APRT,ARHGAP23,ARHGAP31,ASL,ASXL2,ATG2A,ATMIN,ATP2B1,ATP6V1E1,CEP131,BAHD1,BBS7,BCAS3,BEX1,BLOC1S3,TWNK,ATG101,C15orf61,FAM210A,C1orf198,C1orf216,C3orf33,TRAPPC13,ADGB,SDHAF4,GINM1,C7orf50,CALCOCO1,CBY1,CD99L2,CDC42BPB,CDKL2,CDKN1B,CDS1,CGRRF1,CNOT8,CRTAP,CTSB,CUL7,CXorf38,CYP27A1,CYTH3,DALRD3,DAND5,DCTPP1,DENND4C,DIP2B,DOCK4,EEF2,EIF2AK4,AGO3,ERBIN,ERI3,ETV1,MCRIP2,MTFR1L,CIBAR1,FBXL20,FBXW4,FIG4,FMO5,FOXN3,FOXO3,FUCA1,GALNT4,GATC,GDPD3,GLIS3,GPHN,GPS2,GSTM5,GTF3C1,HCFC1R1,HEATR5B,HPS4,RIDA,HYAL2,IKBKG,INVS,IRAK4,IRGQ,KBTBD13,KBTBD2,KIAA0753,KIAA1522,KLHDC10,KPNA6,KRT10,P3H3,LRRC57,LRSAM1,MAGEE1,MAN1C1,MCEE,MRPS15,MTMR10,MZT2B,NAT9,NENF,NEU1,NF1,NFIC,NKIRAS2,OLFML3,OXSM,P2RY6,PACRG,PACS2,PANK1,PAQR3,PEPD,PEX5,PEX7,PGAP1,PHF1,PIAS3,PIKFYVE,PIP4K2A,PIR,PKD1,PPOX,PPP1R3B,PRDX2,PRKCI,PRRG1,PTPRS,PTS,QKI,MOK,RASSF3,RCBTB2,RELL1,RNF103,RNF144B,RNF149,RNF166,RNF180,RNLS,RWDD2A,RXRB,SAMD4B,SECISBP2L,SETX,SLC25A1,SLC25A39,SLC25A46,SLC2A12,SMAP1,SNAP47,SNX33,SORBS3,SPA17,SPATA6,SPG11,SPTAN1,SQLE,SQOR,STOM,TBC1D10A,TCF12,TCF4,TEX264,TF,TFDP2,TGFBR2,TM2D2,TM6SF1,TMCO3,TMED1,LDAF1,TMEM183A,TMEM205,TMEM37,TMX4,TOM1,TPCN1,TPK1,TRAM1,TRAPPC10,TRIM65,TRMT1,TRPM7,TTC38,UNC93B1,VPS33B,WDR26,WDR45,WDR5B,ZDHHC20,ZFAND1,ZFAND2A,ZNF746 FOUNDER_NAMES