STANDARD_NAME GSE9650_NAIVE_VS_EXHAUSTED_CD8_TCELL_UP SYSTEMATIC_NAME M5821 COLLECTION C7:IMMUNESIGDB MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/GSE9650_NAIVE_VS_EXHAUSTED_CD8_TCELL_UP NAMESPACE HUMAN_GENE_SYMBOL DESCRIPTION_BRIEF Genes up-regulated in comparison of naive CD8 T cells versus exhausted CD8 T cells. DESCRIPTION_FULL CD8 T cells normally differentiate from resting naïve T cells into function effector and then memory CD8 T cells following acute infections. During chronic viral infections, however, virus-specific CD8 T cells often become exhausted. We used microarrays to examine the gene expression differences between naive, effector, memory and exhausted virus-specific CD8 T cells following lymphocytic choriomeningitis virus infection. PMID 17950003 GEOID GSE9650 AUTHORS Wherry EJ,Ha SJ,Kaech SM,Haining WN,Sarkar S,Kalia V,Subramaniam S,Blattman JN,Barber DL,Ahmed R CONTRIBUTOR Jernej Godec CONTRIBUTOR_ORG Dana-Farber Cancer Institute EXACT_SOURCE GSE9650_1254_200_UP FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL SOURCE_MEMBERS ABCC5,ABCE1,ABLIM1,ACADM,ACP5,ADCY7,ADD1,ADRB2,ANAPC16,ANAPC5,ANKRD10,AP3M1,API5,ARFGAP2,ARMC1,ATP6V0B,ATP6V0C,ATP8A1,AURKAIP1,B4GALT1,BRAP,C10orf46,C11orf31,C17orf62,C18orf32,C22orf28,C2orf43,C5orf34,C8orf33,C8orf42,C9orf23,CALU,CCND2,CCNDBP1,CCR7,CCT4,CCT8,CDC37,CHP,CLIP1,CLK4,CNDP2,CNN3,DAP,DCTN5,DDC,DDX50,DEAF1,DGKA,DNAJB1,DNAJC7,DUS1L,DYM,EIF2B5,EIF2S1,EIF3B,ELOVL5,EMB,EML5,ENG,EXOSC7,EYA2,FAM101B,FAM102A,FAM107B,FAM109A,FAM173A,FARSB,FBL,FBXL3,GABBR1,GALNT10,GALNT11,GGT5,GHITM,GIT1,GLO1,GM2A,GNPAT,GSN,GSTT2,GTF2I,HADHB,HBG2,HBS1L,HDAC5,HEXA,HMP19,HPCAL1,HSD11B1,IDH2,IFRD2,IGHM,IKBKE,IL7R,IMPDH2,INTS9,IPO4,ISYNA1,ITGB7,ITPA,JKAMP,KCNN4,KLF2,KLK8,LMAN1,LRWD1,LYSMD1,MAFK,MAP1LC3B,MAT2A,MBP,MBTPS1,METTL9,MLX,MORF4L2,MRPL37,MRPS18B,MTCH1,NCOA5,NDEL1,NSMCE1,NUDT16L1,ORC5,P4HA1,PDE6A,PHTF1,PIGX,PIK3CD,PIP4K2A,PKD1,PLAC8,PLP2,PPDPF,PPIF,PQLC1,PRKCB,PRKD2,PRMT3,PRPSAP1,PSAP,PSMC5,PSMD13,PTPN6,PWP1,RABGGTA,RAD17,RALGPS2,RAMP1,RBM38,RERE,RGS10,RNASEH2A,RNF38,RNF5,RNPS1,RPN1,RPRD1A,RUFY1,S1PR4,SATB1,SELL,SEMA4A,SEPT6,SESN1,SETD6,SGK1,SLC1A5,SLCO3A1,SMU1,SNRNP40,SNTB1,SNX6,SPNS1,SPTLC1,SRCAP,SRP68,SRPK1,SS18,ST13,ST6GAL1,TBCEL,TEC,TIA1,TIMM44,TMEM223,TMEM50B,TSTA3,TUBB,TWF2,TXNL4A,UBA2,UBR4,USP24,USP39,VPS25,XIAP,XPC,YIPF1,YIPF3 GENE_SYMBOLS ABCC5,ABCE1,ABLIM1,ACADM,ACP5,ADCY7,ADD1,ADRB2,ANAPC16,ANAPC5,ANKRD10,AP3M1,API5,ARFGAP2,ARMC1,ATP6V0B,ATP6V0C,ATP8A1,AURKAIP1,B4GALT1,BRAP,CACUL1,SELENOH,CYBC1,C18orf32,RTCB,LDAH,C5orf34,C8orf33,TDRP,RPP25L,CALU,CCND2,CCNDBP1,CCR7,CCT4,CCT8,CDC37,CHP1,CLIP1,CLK4,CNDP2,CNN3,DAP,DCTN5,DDC,DDX50,DEAF1,DGKA,DNAJB1,DNAJC7,DUS1L,DYM,EIF2B5,EIF2S1,EIF3B,ELOVL5,EMB,EML5,ENG,EXOSC7,EYA2,RFLNB,EEIG1,FAM107B,PHETA1,ANTKMT,FARSB,FBL,FBXL3,GABBR1,GALNT10,GALNT11,GGT5,GHITM,GIT1,GLO1,GM2A,GNPAT,GSN,GSTT2,GTF2I,HADHB,HBG2,HBS1L,HDAC5,HEXA,NSG2,HPCAL1,HSD11B1,IDH2,IFRD2,IGHM,IKBKE,IL7R,IMPDH2,INTS9,IPO4,ISYNA1,ITGB7,ITPA,JKAMP,KCNN4,KLF2,KLK8,LMAN1,LRWD1,LYSMD1,MAFK,MAP1LC3B,MAT2A,MBP,MBTPS1,METTL9,MLX,MORF4L2,MRPL37,MRPS18B,MTCH1,NCOA5,NDEL1,NSMCE1,NUDT16L1,ORC5,P4HA1,PDE6A,PHTF1,PIGX,PIK3CD,PIP4K2A,PKD1,PLAC8,PLP2,PPDPF,PPIF,SLC66A2,PRKCB,PRKD2,PRMT3,PRPSAP1,PSAP,PSMC5,PSMD13,PTPN6,PWP1,RABGGTA,RAD17,RALGPS2,RAMP1,RBM38,RERE,RGS10,RNASEH2A,RNF38,RNF5,RNPS1,RPN1,RPRD1A,RUFY1,S1PR4,SATB1,SELL,SEMA4A,SEPTIN6,SESN1,SETD6,SGK1,SLC1A5,SLCO3A1,SMU1,SNRNP40,SNTB1,SNX6,SPNS1,SPTLC1,SRCAP,SRP68,SRPK1,SS18,ST13,ST6GAL1,TBCEL,TEC,TIA1,TIMM44,TMEM223,TMEM50B,GFUS,TUBB,TWF2,TXNL4A,UBA2,UBR4,USP24,USP39,VPS25,XIAP,XPC,YIPF1,YIPF3 FOUNDER_NAMES