STANDARD_NAME RAF_UP.V1_DN SYSTEMATIC_NAME M2726 COLLECTION C6 MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/RAF_UP.V1_DN NAMESPACE HUMAN_GENE_SYMBOL DESCRIPTION_BRIEF Genes down-regulated in MCF-7 cells (breast cancer) positive for ESR1 [Gene ID=2099] MCF-7 cells (breast cancer) stably over-expressing constitutively active RAF1 [Gene ID=5894] gene. DESCRIPTION_FULL Profiling of MCF-7 cell lines stably overexpressing constitutively active Raf-1 as a model of overexpressed growth factor signaling, as well as control vector transfected cells (coMCF-7). PMID 16585219 GEOID GSE3542 AUTHORS Creighton CJ,Hilger AM,Murthy S,Rae JM,Chinnaiyan AM,El-Ashry D CONTRIBUTOR Pablo Tamayo CONTRIBUTOR_ORG Broad Institute EXACT_SOURCE Raf-1 vs Controls; bottom 200 genes (diff. of means) FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL SOURCE_MEMBERS ABAT,ABCA12,ABLIM1,AGR2,AIM1,AK3L1,ALCAM,APBB2,AREG /// LOC653193,ARL3,ARMC9,ARNT2,ASCL1,AUTS2,B3GALNT1,BAG3,BAMBI,BCL2,BTBD3,BTG3,C12orf24,C16orf45,C1orf34,C6orf97,C9orf3,C9orf91,CA12,CALB2,CALCR,CASK,CAV1,CBFA2T3,CCDC22,CCDC6,CCND1,CELSR2,CLIC3,COL9A3,CPE,CRABP1,CRNKL1,CSTA,CSTF2T,CTNNAL1,CXCR7,DDIT4,DIDO1,DKK1,DLC1,DLG5,DNAJC12,EDEM3 /// LOC653815,EFNB2,EGR3,EIF2S3,ELOVL2,ENAH,EPB41L2,EPB41L4B,FANCF,FOS,FRAT2,FTO,FTSJ1,GALC,GALNAC4S-6ST,GAPVD1,GDAP1,GFRA1,GHR,GPATC2,GPC4,GPD2,GPR30,GPR56,GREB1,GTF2I,GULP1,HDGFRP3,HIST1H4H,HSPB8,ID1,ID2,ID2 /// ID2B,IFT57,IGF1R,IGFBP2,IGFBP4,IGFBP5,IL24,INPP4B,INPP5F,IRS1,IRX5,JAK2,JMJD1C,KIAA0984,KIAA1324,KIAA1467,KITLG,KYNU,LIN7C,LOC645619,LPGAT1,LRIG1,MAFB,MDK,MEGF9,MGP,MICB,MINPP1,MPDZ,MSMB,MXI1,MYB,MYBL1,MYLK,MYO10,MYO1B,NEDD4L,NPY1R,OSR2,OSTM1,PALLD,PCGF3,PCSK6,PDCD4,PDGFRL,PDK3,PDZK1,PGR,PKP4,PLCB1,PLCB4,PLK2,PLS1,PMAIP1,PMP22,PPM1E,PPP1R3C,PTBP2,PXDN,RASGRP1,RHOBTB3,RND3,ROBO1,RP13-360B22.2 /// LO,RRN3,S100A14,SATB2,SCUBE2,SDC2,SELENBP1,SERPINA3,SGCG,SH3BGRL,SHQ1,SHROOM2,SIDT1,SLC16A1,SLC19A2,SLC1A1,SLC24A3,SLC39A8,SLC6A14,SLC7A2,SMAD7,SNAP23,SOX3,SOX4,SOX9,SPANXA1 /// SPANXB1,SPIN,STC2,SYTL2,TAF9B /// LOC653068,TBC1D16,TCF12,TCN1,TFAP2A,TFF1,TFF3,TFPI,TGFB2,TGIF2,THADA,THRAP2,TM4SF1,TMPRSS3,TRPS1,TSC22D3,TSPAN3,UGDH,UTX,VAV3,WASF3,WISP2,ZBTB10,ZHX2,ZNF32 GENE_SYMBOLS ABAT,ABCA12,ABLIM1,AGR2,CRYBG1,AK4,ALCAM,APBB2,,ARL3,ARMC9,ARNT2,ASCL1,AUTS2,B3GALNT1,BAG3,BAMBI,BCL2,BTBD3,BTG3,FAM216A,BMERB1,TTC39A,CCDC170,AOPEP,TMEM268,CA12,CALB2,CALCR,CASK,CAV1,CBFA2T3,CCDC22,CCDC6,CCND1,CELSR2,CLIC3,COL9A3,CPE,CRABP1,CRNKL1,CSTA,CSTF2T,CTNNAL1,ACKR3,DDIT4,DIDO1,DKK1,DLC1,DLG5,DNAJC12,,EFNB2,EGR3,EIF2S3,ELOVL2,ENAH,EPB41L2,EPB41L4B,FANCF,FOS,FRAT2,FTO,FTSJ1,GALC,CHST15,GAPVD1,GDAP1,GFRA1,GHR,GPATCH2,GPC4,GPD2,GPER1,ADGRG1,GREB1,GTF2I,GULP1,,H4C8,HSPB8,ID1,ID2,,IFT57,IGF1R,IGFBP2,IGFBP4,IGFBP5,IL24,INPP4B,INPP5F,IRS1,IRX5,JAK2,JMJD1C,TBC1D30,ELAPOR1,FAM234B,KITLG,KYNU,LIN7C,AK4P3,LPGAT1,LRIG1,MAFB,MDK,MEGF9,MGP,MICB,MINPP1,MPDZ,MSMB,MXI1,MYB,MYBL1,MYLK,MYO10,MYO1B,NEDD4L,NPY1R,OSR2,OSTM1,PALLD,PCGF3,PCSK6,PDCD4,PDGFRL,PDK3,PDZK1,PGR,PKP4,PLCB1,PLCB4,PLK2,PLS1,PMAIP1,PMP22,PPM1E,PPP1R3C,PTBP2,PXDN,RASGRP1,RHOBTB3,RND3,ROBO1,,RRN3,S100A14,SATB2,SCUBE2,SDC2,SELENBP1,SERPINA3,SGCG,SH3BGRL,SHQ1,SHROOM2,SIDT1,SLC16A1,SLC19A2,SLC1A1,SLC24A3,SLC39A8,SLC6A14,SLC7A2,SMAD7,SNAP23,SOX3,SOX4,SOX9,,SPIN1,STC2,SYTL2,,TBC1D16,TCF12,TCN1,TFAP2A,TFF1,TFF3,TFPI,TGFB2,TGIF2,THADA,MED13L,TM4SF1,TMPRSS3,TRPS1,TSC22D3,TSPAN3,UGDH,KDM6A,VAV3,WASF3,CCN5,ZBTB10,ZHX2,ZNF32 FOUNDER_NAMES