STANDARD_NAME YAMAZAKI_TCEB3_TARGETS_UP SYSTEMATIC_NAME M1542 COLLECTION C2:CGP MSIGDB_URL https://www.gsea-msigdb.org/gsea/msigdb/human/geneset/YAMAZAKI_TCEB3_TARGETS_UP NAMESPACE MOUSE_SEQ_ACCESSION DESCRIPTION_BRIEF Genes up-regulated in embryonic stem cells from TCEB3 [GeneID=6924] knockout mice. DESCRIPTION_FULL Elongin A is a transcription elongation factor that increases the overall rate of mRNA chain elongation by RNA polymerase II. To investigate the function of Elongin A in vivo, the two alleles of the Elongin A gene have been disrupted by homologous recombination in murine embryonic stem (ES) cells. The Elongin A-deficient ES cells are viable, but show a slow growth phenotype because they undergo a delayed mitosis. The cDNA microarray and RNase protection assay using the wild-type and Elongin A-deficient ES cells indicate that the expression of only a small subset of genes is affected in the mutant cells. Taken together, our results suggest that Elongin A regulates transcription of a subset but not all of genes and reveal a linkage between Elongin A function and cell cycle progression. PMID 12604609 GEOID AUTHORS Yamazaki K,Aso T,Ohnishi Y,Ohno M,Tamura K,Shuin T,Kitajima S,Nakabeppu Y CONTRIBUTOR John Newman CONTRIBUTOR_ORG University of Washington EXACT_SOURCE Table 2S FILTERED_BY_SIMILARITY EXTERNAL_NAMES_FOR_SIMILAR_TERMS EXTERNAL_DETAILS_URL SOURCE_MEMBERS AA008180,AA013556,AA023538,AA036380,AA038137,AA062401,AA065676,AA066130,AA066981,AA067151,AA068499,AA068501,AA068812,AA072021,AA087098,AA096861,AA098137,AA106153,AA106222,AA108417,AA117983,AA123128,AA123168,AA125312,AA145454,AA145784,AA162049,AA170421,AA174621,AA184976,AA189462,AA203947,AA209882,AA210481,AA210531,AA237179,AA239785,AA241780,AA242201,AA272836,AA273416,AA288427,AA387219,AA387336,AA388038,AA388310,AA404014,AA413187,AA413899,AA415182,AA415534,AA426838,AA426892,AA437441,AA437473,AA437788,AA437961,AA445786,AA450438,AA450534,AA450918,AA450922,AA462231,AA466852,AA469669,AA472876,AA518515,AA518751,AA522404,AA536899,AA543569,AA543948,AA543967,AA545105,AA545932,AA549524,AA549590,AA553029,AA561797,AA591806,AA600571,AA606605,AA606949,AA606969,AA607483,AA607583,AA616995,AA617310,AA619763,AA623498,AA624429,AA624867,AA645952,AA645955,AA655762,AA656394,AA671135,AA671202,AA671503,AA674109,AA681596,AA709508,AA709774,AA710704,AA717156,AA734523,AA739111,AA755273,AA755959,AA756678,AA759412,AA760135,AA760184,AA770768,AA770866,AA771616,AA793036,AA793433,AA795264,AA796126,AA799097,AA822015,AA822044,AA822116,AA823657,AA840163,AA840196,AA867145,AA870655,AA879568,AA879919,AA882450,AA981143,AA981343,AA982702,AI019469,AI020979,AI046529,AI047053,AI120822,AI121411,AI122219,AI154278,AI155344,AI156376,AI158565,AI158775,AI158798,AI180799,AI180958,AI194360,AI227034,AI322367,AI323795,AI325647,AI325730,AI386055,AI386254,AI430622,AI466582,AI510076,AI549660,AI550245,AI551931,AI552060,AI553166,AI587725,AI587949,AI594147,AI594561,AI606650,AI607947,AI644923,AI644974,AI645058,AI892501,AI894071,AW210333,W11432,W12688,W46090,W53691,W53787,W53856,W53959,W62520,W64505,W65964,W82497,W83121 GENE_SYMBOLS HSPG2,SOX17,SEMA6A,SNAI1,PGA5,TCERG1,TLNRD1,KDELR3,PSPH,GGTA1,FKBP9,ANKRD50,MBNL2,MDFIC,ATP1B1,FDX1,JUND,CLIC1,PRPF38B,IGFBP4,CITED2,ITGB1,LAMA1,COBLL1,IGFBP4,TIMP3,PXDN,NR2F2,CYB561A3,INTS6L,INTS6L,SEMA6D,NR4A1,CLU,ERP44,FURIN,CYP26A1,ATP6AP1,SPINK1,AQP8,TCF7L2,MPZL2,,,FBLN2,P4HA2,,,,,RCOR1,CDC42SE2,PLAT,,,TFPI,PARVB,LAMC1,DOCK9,GLUL,PDIA3,,RAMP2,CCN1,CALU,CD38,LMBRD1,P4HA1,GALNT2,GATA6,PTPN9,STARD10,RNF24,KIT,DDAH1,,ZNF644,CDH5,GNA12,SFMBT2,,NID1,PSAP,SURF4,SRGN,,UBE2Q2,ZYX,CTSV,,MAN1A2,ARF4,FBXL22,NID2,GNS,GRINA,MYH6,TMED2,SRPRB,SGCE,PLOD1,CITED1,LPP,EXT1,EPAS1,CUL1,LRPAP1,GREM2,EPHB4,PDE1B,,COL4A1,ANXA2,CST3,P4HB,YAF2,VEGFA,ENPEP,MYL3,YPEL2,FHOD3,HERPUD1,SERPINH1,TTR,B4GALNT2,ENTREP1,ZFHX3,CCNC,THBD,CCND2,F3,SUSD2,FUT8,SLC7A1,HS3ST1,GLUL,,SLC16A1,COL4A5,SERPING1,KALRN,CASKIN2,TNFRSF10B,TYRO3,FNDC3A,GNG10,PTPRM,STRA6,GNAS,GANAB,,FLRT3,ID2,BACH1,APP,CRYAB,GHR,DYRK2,EPOP,,CREB3L1,PLOD2,RCN1,LAMB1,CDC42EP1,SPARC,MAN1A2,SLC38A1,B2M,AMFR,CALM1,PTH1R,MSL3,HSDL1,RRBP1,CTSZ,SPOCK1,EFEMP2,AMOTL2,HSDL1,KDELR2,HOXC6,COL4A2,MFGE8,WARS1,TST,EPAS1,VAMP8,MYL3,LGMN FOUNDER_NAMES