Human Gene Set: BLANCO_MELO_BETA_INTERFERON_TREATED_BRONCHIAL_EPITHELIAL_CELLS_UP


Standard name BLANCO_MELO_BETA_INTERFERON_TREATED_BRONCHIAL_EPITHELIAL_CELLS_UP
Systematic name M34022
Brief description Genes up-regulated on treatment of normal human bronchial epithelial cells with beta interferon (hIFNB treatment 100u/ml, 4-12hrs).
Full description or abstract Analysis of the transcriptional response to SARS-CoV-2 compared with other respiratory viruses, including MERS-CoV, SARS-CoV-1 (SARS), human parainfluenza virus 3 (HPIV3), respiratory syncytial virus (RSV), and IAV.
Collection C2: Curated
      CGP: Chemical and Genetic Perturbations
Source publication Pubmed 32416070   Authors: Blanco-Melo D,Nilsson-Payant BE,Liu WC,Uhl S,Hoagland D,Møller R,Jordan TX,Oishi K,Panis M,Sachs D,Wang TT,Schwartz RE,Lim JK,Albrecht RA,tenOever BR
Exact source Table S2. Differential Gene Expression Analysis of Experiments Performed in NHBE Cells, Related to Figure 2. log2(FC)>1, padj<0.05
Related gene sets (show 29 additional gene sets from the source publication)

(show 22 gene sets from the same authors)
External links  
Filtered by similarity ?
Organism Homo sapiens
Contributed by Anthony Castanza (MSigDB Team)
Source platform HUMAN_GENE_SYMBOL
Dataset references (show 1 datasets)
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Further investigate these 378 genes
Gene families ? Categorize these 378 genes by gene family
Show members (show 381 members mapped to 378 genes)
Version history  

See MSigDB license terms here. Please note that certain gene sets have special access terms.