Human Gene Set: GSE15767_MED_VS_SCS_MAC_LN_DN


Standard name GSE15767_MED_VS_SCS_MAC_LN_DN
Systematic name M3585
Brief description Genes down-regulated in comparison of medullary macrophages versus subcapsular sinus (SCS) macrophages.
Full description or abstract LN resident macrophages lining the lymphatic sinuses play critical roles in antigen capture and presentation as well as degradation. We used microarray to examine global gene expression profiles to compare SCS and med macrophages to determine the underlying molecular basis of their differential handling of antigens.
Collection C7: Immunologic Signature
      IMMUNESIGDB: ImmuneSigDB
Source publication Pubmed 19503106   Authors: Phan TG,Green JA,Gray EE,Xu Y,Cyster JG
Exact source GSE15767_1760_200_DN
Related gene sets (show 1 additional gene sets from the source publication)

(show 7 gene sets from the same authors)
External links  
Filtered by similarity ?
Organism Mus musculus
Contributed by Jernej Godec (Dana-Farber Cancer Institute)
Source platform HUMAN_GENE_SYMBOL
Dataset references (show 1 datasets)
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Further investigate these 199 genes
Gene families ? Categorize these 199 genes by gene family
Show members (show 200 members mapped to 199 genes)
Version history 7.3: Moved to ImmuneSigDB sub-collection.

See MSigDB license terms here. Please note that certain gene sets have special access terms.