Human Gene Set: GSE3400_UNTREATED_VS_IFNB_TREATED_MEF_UP


Standard name GSE3400_UNTREATED_VS_IFNB_TREATED_MEF_UP
Systematic name M6133
Brief description Genes up-regulated in mouse embryonic fibroblasts (MEF): untreated versus interferon beta.
Full description or abstract A number of IFN-induced proteins are believed to be responsible for the antiviral state induced by IFNs. Our microarray analysis of IFN-regulated genes in MEFs from wild-type mice identified 124 probe sets that were differentially regulated upon IFN treatment. This group consisted of many known ISGs such as Ifit1, Gbp2, mx1, Isg15, Stat1, nmi, mx2, If204, Adar, Irf1, and protein kinase R.
Collection C7: Immunologic Signature
      IMMUNESIGDB: ImmuneSigDB
Source publication Pubmed 15131130   Authors: Pfeffer LM,Kim JG,Pfeffer SR,Carrigan DJ,Baker DP,Wei L,Homayouni R
Exact source GSE3400_3548_200_UP
Related gene sets (show 1 additional gene sets from the source publication)

(show 76 gene sets from the same authors)
External links
Filtered by similarity ?
Source species Mus musculus
Contributed by Jernej Godec (Dana-Farber Cancer Institute)
Source platform or
identifier namespace
HUMAN_GENE_SYMBOL
Dataset references (show 1 datasets)
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)

Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Further investigate these 194 genes
Gene families ? Categorize these 194 genes by gene family
Show members (show 200 source identifiers mapped to 194 genes)
Version history 7.3: Moved to ImmuneSigDB sub-collection.

See MSigDB license terms here. Please note that certain gene sets have special access terms.