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Human Gene Set: HP_3_4_FINGER_CUTANEOUS_SYNDACTYLY
Standard name
HP_3_4_FINGER_CUTANEOUS_SYNDACTYLY
Systematic name
M46216
Brief description
3-4 finger cutaneous syndactyly
Full description or abstract
A soft tissue continuity in the A/P axis between fingers 3 and 4. [https://orcid.org/0000-0002-0736-9199]
Collection
C5: Ontology
HPO: Human Phenotype Ontology
Source publication
Exact source
HP:0011939
Related gene sets
External links
https://hpo.jax.org/app/browse/term/HP:0011939
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Human Phenotype Ontology Group (The Jackson Laboratory (JAX))
Source platform or
identifier namespace
Human_NCBI_Gene_ID
Dataset references
Download gene set
format:
grp
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gmt
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xml
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json
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TSV metadata
Compute overlaps
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H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 17 genes
Gene families
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Categorize
these 17 genes by gene family
Show members
(
show
17 source identifiers mapped to 17 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
1001
1001
CDH3
cadherin 3 [Source:HGNC Symbol;Acc:HGNC:1762]
10586
10586
MAB21L2
mab-21 like 2 [Source:HGNC Symbol;Acc:HGNC:...
1947
1947
EFNB1
ephrin B1 [Source:HGNC Symbol;Acc:HGNC:3226]
2697
2697
GJA1
gap junction protein alpha 1 [Source:HGNC S...
2737
2737
GLI3
GLI family zinc finger 3 [Source:HGNC Symbo...
284252
284252
KCTD1
potassium channel tetramerization domain co...
3239
3239
HOXD13
homeobox D13 [Source:HGNC Symbol;Acc:HGNC:5...
583
583
BBS2
Bardet-Biedl syndrome 2 [Source:HGNC Symbol...
6299
6299
SALL1
spalt like transcription factor 1 [Source:H...
64840
64840
PORCN
porcupine O-acyltransferase [Source:HGNC Sy...
65250
65250
CPLANE1
ciliogenesis and planar polarity effector c...
6910
6910
TBX5
T-box transcription factor 5 [Source:HGNC S...
775
775
CACNA1C
calcium voltage-gated channel subunit alpha...
79639
79639
TMEM53
transmembrane protein 53 [Source:HGNC Symbo...
7994
7994
KAT6A
lysine acetyltransferase 6A [Source:HGNC Sy...
8294
8294
H4C9
H4 clustered histone 9 [Source:HGNC Symbol;...
8626
8626
TP63
tumor protein p63 [Source:HGNC Symbol;Acc:H...
Version history
2025.1.Hs: Updated to HPO Release 2025-05-06.
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