Human Gene Set: SOGA_COLORECTAL_CANCER_MYC_DN


Standard name SOGA_COLORECTAL_CANCER_MYC_DN
Systematic name M45006
Brief description Metabolic related genes that showed negative correlation with MYC expression in CRC tissues
Full description or abstract Our transcriptome analyses of paired normal and tumor tissues from 41 patients with colorectal cancer showed that metabolic reprogramming of colorectal cancer is caused chiefly by aberrant MYC expression, which induced at least 215 metabolic reactions by changing the expression levels of metabolic genes and transporter genes. Further, MYC negatively regulated the expression of genes involved in mitochondrial biogenesis and maintenance but positively regulated genes involved in DNA and histone methylation. Knockdown of MYC in colorectal cancer cells reset the altered metabolism and suppressed cell growth.
Collection C2: Curated
      CGP: Chemical and Genetic Perturbations
Source publication Pubmed 28847964   Authors: Satoh K,Yachida S,Sugimoto M,Oshima M,Nakagawa T,Akamoto S,Tabata S,Saitoh K,Kato K,Sato S,Igarashi K,Aizawa Y,Kajino-Sakamoto R,Kojima Y,Fujishita T,Enomoto A,Hirayama A,Ishikawa T,Taketo MM,Kushida Y,Haba R,Okano K,Tomita M,Suzuki Y,Fukuda S,Aoki M,Soga T
Exact source Table S3: Candidate MYC target metabolic genes
Related gene sets (show 1 additional gene sets from the source publication)

(show 8 gene sets from the same authors)
External links https://www.pnas.org/content/pnas/suppl/2017/08/25/1710366114.DCSupplemental/pnas.17103...
Filtered by similarity ?
Source species Homo sapiens
Contributed by Rintaro Saito (Institute for Advanced Biosciences, Keio University)
Source platform or
identifier namespace
HUMAN_GENE_SYMBOL
Dataset references (show 1 datasets)
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)

Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Further investigate these 71 genes
Gene families ? Categorize these 71 genes by gene family
Show members (show 71 source identifiers mapped to 71 genes)
Version history 2022.1.Hs: Renamed from SATOH_COLORECTAL_CANCER_MYC_DN

See MSigDB license terms here. Please note that certain gene sets have special access terms.