Human Gene Set: STAMBOLSKY_TARGETS_OF_MUTATED_TP53_DN


Standard name STAMBOLSKY_TARGETS_OF_MUTATED_TP53_DN
Systematic name M2102
Brief description Genes repressed in SKBR3 cells (breast cancer) by mutated TP53 [GeneID=7157].
Full description or abstract The p53 gene is mutated in many human tumors. Cells of such tumors often contain abundant mutant p53 (mutp53) protein, which may contribute actively to tumor progression via a gain-of-function mechanism. We applied ChIP-on-chip analysis and identified the vitamin D receptor (VDR) response element as overrepresented in promoter sequences bound by mutp53. We report that mutp53 can interact functionally and physically with VDR. Mutp53 is recruited to VDR-regulated genes and modulates their expression, augmenting the transactivation of some genes and relieving the repression of others. Furthermore, mutp53 increases the nuclear accumulation of VDR. Importantly, mutp53 converts vitamin D into an antiapoptotic agent. Thus, p53 status can determine the biological impact of vitamin D on tumor cells.
Collection C2: Curated
      CGP: Chemical and Genetic Perturbations
Source publication Pubmed 20227041   Authors: Stambolsky P,Tabach Y,Fontemaggi G,Weisz L,Maor-Aloni R,Siegfried Z,Shiff I,Kogan I,Shay M,Kalo E,Blandino G,Simon I,Oren M,Rotter V
Exact source Table 2S: Genes repressed by mutp53
Related gene sets (show 4 additional gene sets from the source publication)

(show 16 gene sets from any of these authors)
External links
Filtered by similarity ?
Source species Homo sapiens
Contributed by Arthur Liberzon (MSigDB Team)
Source platform or
identifier namespace		 HUMAN_GENE_SYMBOL
Dataset references (show 1 datasets)
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)

Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Further investigate these 51 genes
Gene families ? Categorize these 51 genes by gene family
Show members (show 51 source identifiers mapped to 51 genes)
Version history 3.1: First introduced

See MSigDB license terms here. Please note that certain gene sets have special access terms.