login
register
GSEA Home
Downloads
Molecular Signatures Database
Documentation
Contact
Team
MSigDB Home
Human Collections
About
Browse
Search
Investigate
Gene Families
Mouse Collections
About
Browse
Search
Investigate
Help
Human Gene Set: WP_SARS_COV_2_B_1_1_7_VARIANT_ANTAGONISES_INNATE_IMMUNE_ACTIVATION
Standard name
WP_SARS_COV_2_B_1_1_7_VARIANT_ANTAGONISES_INNATE_IMMUNE_ACTIVATION
Systematic name
M42581
Brief description
SARS CoV 2 B 1 1 7 variant antagonises innate immune activation
Full description or abstract
Collection
C2: Curated
CP: Canonical Pathways
CP:WIKIPATHWAYS: WikiPathways
Source publication
Exact source
WP5116
Related gene sets
External links
https://www.wikipathways.org/instance/WP5116
Filtered by similarity
?
Source species
Homo sapiens
Contributed by
WikiPathways
Source platform or
identifier namespace
Human_NCBI_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
?
(
show
collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
?
NG-CHM interactive heatmaps
(
Please note that clustering takes a few seconds
)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 9 genes
Gene families
?
Categorize
these 9 genes by gene family
Show members
(
show
9 source identifiers mapped to 9 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
23586
23586
RIGI
RNA sensor RIG-I [Source:HGNC Symbol;Acc:HGNC:...
29110
29110
TBK1
TANK binding kinase 1 [Source:HGNC Symbol;Acc:...
3456
3456
IFNB1
interferon beta 1 [Source:HGNC Symbol;Acc:HGNC...
3661
3661
IRF3
interferon regulatory factor 3 [Source:HGNC Sy...
57506
57506
MAVS
mitochondrial antiviral signaling protein [Sou...
7187
7187
TRAF3
TNF receptor associated factor 3 [Source:HGNC ...
7189
7189
TRAF6
TNF receptor associated factor 6 [Source:HGNC ...
9641
9641
IKBKE
inhibitor of nuclear factor kappa B kinase sub...
9868
9868
TOMM70
translocase of outer mitochondrial membrane 70...
Version history
2023.2.Hs: Renamed from WP_SARSCOV2_B117_VARIANT_ANTAGONISES_INNATE_IMMUNE_ACTIVATION.
See
MSigDB license terms here
. Please note that certain gene sets have special access terms.