Browse Human Gene Sets

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  • H (hallmark gene sets, 50 gene sets)
  • C1 (positional gene sets, 302 gene sets)
  • C2 (curated gene sets, 7411 gene sets)
    • CGP (chemical and genetic pertubations, 3494 gene sets)
    • CP (canonical pathways, 3917 gene sets)
  • C3 (regulatory gene sets, 3713 gene sets)
    • MIR (microRNA targets, 2598 gene sets)
    • TFT (all transcription factor targets, 1115 gene sets)
      • TFT:GTRD (GTRD transcription factor targets, 505 gene sets)
      • TFT:TFT_LEGACY (legacy transcription factor targets, 610 gene sets)
  • C4 (computational gene sets, 1006 gene sets)
    • 3CA (Curated Cancer Cell Atlas gene sets, 148 gene sets)
    • CGN (cancer gene neighborhoods, 427 gene sets)
    • CM (cancer modules, 431 gene sets)
  • C5 (ontology gene sets, 16107 gene sets)
    • GO (Gene Ontology, 10454 gene sets)
      • GO:BP (GO biological process, 7608 gene sets)
      • GO:CC (GO cellular component, 1026 gene sets)
      • GO:MF (GO molecular function, 1820 gene sets)
    • HPO (Human Phenotype Ontology, 5653 gene sets)
  • C6 (oncogenic gene sets, 189 gene sets)
  • C7 (immunologic gene sets, 5219 gene sets)
    • IMMUNESIGDB (ImmuneSigDB gene sets, 4872 gene sets)
    • VAX (vaccine response gene sets, 347 gene sets)
  • C8 (cell type signature gene sets, 840 gene sets)

Click on a gene set name to view its gene set page.

GAVISH_3CA_MALIGNANT_METAPROGRAM_10
_PROTEIN_MATURATION

GAVISH_3CA_MALIGNANT_METAPROGRAM_11
_TRANSLATION_INITIATION

GAVISH_3CA_MALIGNANT_METAPROGRAM_12
_EMT_1

GAVISH_3CA_MALIGNANT_METAPROGRAM_13
_EMT_2

GAVISH_3CA_MALIGNANT_METAPROGRAM_14
_EMT_3

GAVISH_3CA_MALIGNANT_METAPROGRAM_15
_EMT_4

GAVISH_3CA_MALIGNANT_METAPROGRAM_16
_MES_GLIOMA

GAVISH_3CA_MALIGNANT_METAPROGRAM_17
_INTERFERON_MHC_II_1

GAVISH_3CA_MALIGNANT_METAPROGRAM_18
_INTERFERON_MHC_II_2

GAVISH_3CA_MALIGNANT_METAPROGRAM_19
_EPITHELIAL_SENESCENCE

GAVISH_3CA_MALIGNANT_METAPROGRAM_20
_MYC

GAVISH_3CA_MALIGNANT_METAPROGRAM_21
_RESPIRATION

GAVISH_3CA_MALIGNANT_METAPROGRAM_22
_SECRETED_1

GAVISH_3CA_MALIGNANT_METAPROGRAM_23
_SECRETED_2

GAVISH_3CA_MALIGNANT_METAPROGRAM_24
_CILIA

GAVISH_3CA_MALIGNANT_METAPROGRAM_25
_ASTROCYTES

GAVISH_3CA_MALIGNANT_METAPROGRAM_26
_NPC_GLIOMA

GAVISH_3CA_MALIGNANT_METAPROGRAM_27
_OLIGO_PROGENITOR

GAVISH_3CA_MALIGNANT_METAPROGRAM_28
_OLIGO_NORMAL

GAVISH_3CA_MALIGNANT_METAPROGRAM_29
_NPC_OPC

GAVISH_3CA_MALIGNANT_METAPROGRAM_2_
CELL_CYCLE_G1_S

GAVISH_3CA_MALIGNANT_METAPROGRAM_30
_PDAC_CLASSICAL

GAVISH_3CA_MALIGNANT_METAPROGRAM_31
_ALVEOLAR

GAVISH_3CA_MALIGNANT_METAPROGRAM_32
_SKIN_PIGMENTATION

GAVISH_3CA_MALIGNANT_METAPROGRAM_33
_RBCS

GAVISH_3CA_MALIGNANT_METAPROGRAM_34
_PLATELET_ACTIVATION

GAVISH_3CA_MALIGNANT_METAPROGRAM_35
_HEMATO_RELATED_1

GAVISH_3CA_MALIGNANT_METAPROGRAM_36
_IG

GAVISH_3CA_MALIGNANT_METAPROGRAM_37
_HEMATO_RELATED_2

GAVISH_3CA_MALIGNANT_METAPROGRAM_38
_GLUTATHIONE

GAVISH_3CA_MALIGNANT_METAPROGRAM_39
_METAL_RESPONSE

GAVISH_3CA_MALIGNANT_METAPROGRAM_3_
CELL_CYLCE_HMG_RICH

GAVISH_3CA_MALIGNANT_METAPROGRAM_40
_PDAC_RELATED

GAVISH_3CA_MALIGNANT_METAPROGRAM_41
_UNASSIGNED

GAVISH_3CA_MALIGNANT_METAPROGRAM_4_
CHROMATIN

GAVISH_3CA_MALIGNANT_METAPROGRAM_5_
STRESS

GAVISH_3CA_MALIGNANT_METAPROGRAM_7_
STRESS_IN_VITRO

GAVISH_3CA_MALIGNANT_METAPROGRAM_8_
PROTEASOMAL_DEGRADATION

GAVISH_3CA_MALIGNANT_METAPROGRAM_9_
UNFOLDED_PROTEIN_RESPONSE

GAVISH_3CA_MALIGNANT_METAPROGRAM_ME
TAPROGRAM_6_HYPOXIA

GAVISH_3CA_METAPROGRAM_B_CELLS_B_CE
LLS_1

GAVISH_3CA_METAPROGRAM_B_CELLS_CELL
_CYCLE

GAVISH_3CA_METAPROGRAM_B_CELLS_GERM
INAL_CENTER

GAVISH_3CA_METAPROGRAM_B_CELLS_HSP_
STRESS

GAVISH_3CA_METAPROGRAM_B_CELLS_INTE
RFERON

GAVISH_3CA_METAPROGRAM_B_CELLS_MEMO
RY

GAVISH_3CA_METAPROGRAM_B_CELLS_META
BOLISM_MYC

GAVISH_3CA_METAPROGRAM_B_CELLS_MHC_
II

GAVISH_3CA_METAPROGRAM_B_CELLS_PLAS
MA

GAVISH_3CA_METAPROGRAM_B_CELLS_PROG
ENITOR

GAVISH_3CA_METAPROGRAM_B_CELLS_RESP
IRATION

GAVISH_3CA_METAPROGRAM_B_CELLS_STRE
SS

GAVISH_3CA_METAPROGRAM_CD4_T_CELLS_
CELL_CYCLE

GAVISH_3CA_METAPROGRAM_CD4_T_CELLS_
CYTOTOXIC

GAVISH_3CA_METAPROGRAM_CD4_T_CELLS_
DYSFUNCTION

GAVISH_3CA_METAPROGRAM_CD4_T_CELLS_
GLYCOLYSIS_MYC

GAVISH_3CA_METAPROGRAM_CD4_T_CELLS_
INTERFERON

GAVISH_3CA_METAPROGRAM_CD4_T_CELLS_
NAIVE_1

GAVISH_3CA_METAPROGRAM_CD4_T_CELLS_
NAIVE_2

GAVISH_3CA_METAPROGRAM_CD4_T_CELLS_
STRESS_HSP

GAVISH_3CA_METAPROGRAM_CD4_T_CELLS_
T_REG

GAVISH_3CA_METAPROGRAM_CD4_T_CELLS_
UNASSIGNED

GAVISH_3CA_METAPROGRAM_CD8_T_CELLS_
CELL_CYCLE

GAVISH_3CA_METAPROGRAM_CD8_T_CELLS_
CHROMATIN

GAVISH_3CA_METAPROGRAM_CD8_T_CELLS_
CYTOTOXIC

GAVISH_3CA_METAPROGRAM_CD8_T_CELLS_
DYSFUNCTION

GAVISH_3CA_METAPROGRAM_CD8_T_CELLS_
GLYCOLYSIS_MYC

GAVISH_3CA_METAPROGRAM_CD8_T_CELLS_
HEAT_SHOCK

GAVISH_3CA_METAPROGRAM_CD8_T_CELLS_
INTERFERON

GAVISH_3CA_METAPROGRAM_CD8_T_CELLS_
MEMORY_NAIVE_1

GAVISH_3CA_METAPROGRAM_CD8_T_CELLS_
NAIVE_2

GAVISH_3CA_METAPROGRAM_CD8_T_CELLS_
NAIVE_3

GAVISH_3CA_METAPROGRAM_CD8_T_CELLS_
UNASSIGNED_1

GAVISH_3CA_METAPROGRAM_CD8_T_CELLS_
UNASSIGNED_2

GAVISH_3CA_METAPROGRAM_ENDOTHELIAL_
CELL_CYCLE

GAVISH_3CA_METAPROGRAM_ENDOTHELIAL_
COAGULATION

GAVISH_3CA_METAPROGRAM_ENDOTHELIAL_
ENDO_1

GAVISH_3CA_METAPROGRAM_ENDOTHELIAL_
ENDO_2

GAVISH_3CA_METAPROGRAM_ENDOTHELIAL_
ENDO_3

GAVISH_3CA_METAPROGRAM_ENDOTHELIAL_
ENDO_4

GAVISH_3CA_METAPROGRAM_ENDOTHELIAL_
ENDO_5

GAVISH_3CA_METAPROGRAM_ENDOTHELIAL_
ENDO_6

GAVISH_3CA_METAPROGRAM_ENDOTHELIAL_
ENDO_7

GAVISH_3CA_METAPROGRAM_ENDOTHELIAL_
HEV_1

GAVISH_3CA_METAPROGRAM_ENDOTHELIAL_
HEV_2

GAVISH_3CA_METAPROGRAM_ENDOTHELIAL_
INTERFERON

GAVISH_3CA_METAPROGRAM_ENDOTHELIAL_
NF_KB

GAVISH_3CA_METAPROGRAM_ENDOTHELIAL_
NOTCH_SIGNALING

GAVISH_3CA_METAPROGRAM_ENDOTHELIAL_
STRESS

GAVISH_3CA_METAPROGRAM_EPITHELIAL_A
LVEOLAR

GAVISH_3CA_METAPROGRAM_EPITHELIAL_A
NDROGEN_PROSTATE

GAVISH_3CA_METAPROGRAM_EPITHELIAL_C
ELL_CYCLE

GAVISH_3CA_METAPROGRAM_EPITHELIAL_C
ILIA

GAVISH_3CA_METAPROGRAM_EPITHELIAL_C
OLON_RELATED

GAVISH_3CA_METAPROGRAM_EPITHELIAL_E
MT_LIKE_1

GAVISH_3CA_METAPROGRAM_EPITHELIAL_E
MT_LIKE_2

GAVISH_3CA_METAPROGRAM_EPITHELIAL_E
PI3

GAVISH_3CA_METAPROGRAM_EPITHELIAL_E
PI4

GAVISH_3CA_METAPROGRAM_EPITHELIAL_E
PI_1

GAVISH_3CA_METAPROGRAM_EPITHELIAL_E
PI_2

GAVISH_3CA_METAPROGRAM_EPITHELIAL_E
PISEN

GAVISH_3CA_METAPROGRAM_EPITHELIAL_I
NTERFERON_MHC

GAVISH_3CA_METAPROGRAM_EPITHELIAL_M
ETABOLISM_KIDNEY_1

GAVISH_3CA_METAPROGRAM_EPITHELIAL_M
ETABOLISM_KIDNEY_2

GAVISH_3CA_METAPROGRAM_EPITHELIAL_M
YC

GAVISH_3CA_METAPROGRAM_EPITHELIAL_N
EUROENDOCRINE

GAVISH_3CA_METAPROGRAM_EPITHELIAL_P
DAC_RELATED_1

GAVISH_3CA_METAPROGRAM_EPITHELIAL_P
DAC_RELATED_2

GAVISH_3CA_METAPROGRAM_EPITHELIAL_P
DAC_RELATED_3

GAVISH_3CA_METAPROGRAM_EPITHELIAL_R
ESPIRATION

GAVISH_3CA_METAPROGRAM_EPITHELIAL_S
ECRETED

GAVISH_3CA_METAPROGRAM_EPITHELIAL_S
TRESS

GAVISH_3CA_METAPROGRAM_EPITHELIAL_V
_ATPASE

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
CAF_1

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
CAF_10

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
CAF_2

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
CAF_3

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
CAF_4

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
CAF_5

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
CAF_6

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
CAF_7

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
CAF_8

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
CAF_9

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
CELL_CYCLE

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
COMPLEMENT

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
HYPOXIA

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
INTERFERON

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
LIPID_METABOLISM

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
METAL_RESPONSE

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
MHC_II

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
MHC_II_CYTOKINE

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
MYOFIBROBLASTS

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
PERICYTE_LIKE

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
PI16_POS

GAVISH_3CA_METAPROGRAM_FIBROBLASTS_
STRESS

GAVISH_3CA_METAPROGRAM_MACROPHAGES_
CELL_CYCLE

GAVISH_3CA_METAPROGRAM_MACROPHAGES_
INTERFERON

GAVISH_3CA_METAPROGRAM_MACROPHAGES_
LIPID_ASSOCIATED

GAVISH_3CA_METAPROGRAM_MACROPHAGES_
MAC_1

GAVISH_3CA_METAPROGRAM_MACROPHAGES_
MAC_2

GAVISH_3CA_METAPROGRAM_MACROPHAGES_
MAC_3

GAVISH_3CA_METAPROGRAM_MACROPHAGES_
MES_GLYCOLYSIS

GAVISH_3CA_METAPROGRAM_MACROPHAGES_
MONOCYTE_SECRETED

GAVISH_3CA_METAPROGRAM_MACROPHAGES_
MYC_MITOCHONDRIA

GAVISH_3CA_METAPROGRAM_MACROPHAGES_
PROTEASOMAL_DEGRADATION

GAVISH_3CA_METAPROGRAM_MACROPHAGES_
RESPIRATION

GAVISH_3CA_METAPROGRAM_MACROPHAGES_
STRESS_HSP

GAVISH_3CA_METAPROGRAM_MACROPHAGES_
UNFOLDED_PROTEIN_RESPONSE