Browse Human Gene Sets

Gene set name:

By first letter:

A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

By collection:

[about the MSigDB Human collections]

• H (hallmark gene sets, 50 gene sets)
• C1 (positional gene sets, 302 gene sets)
  • by chromosome: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT
• C2 (curated gene sets, 7670 gene sets)
  • CGP (chemical and genetic pertubations, 3555 gene sets)
  • CP (canonical pathways, 4115 gene sets)
    • CP:BIOCARTA (BioCarta gene sets, 292 gene sets)
    • CP:KEGG_MEDICUS (KEGG Medicus gene sets, 658 gene sets)
    • CP:PID (PID gene sets, 196 gene sets)
    • CP:REACTOME (Reactome gene sets, 1839 gene sets)
    • CP:WIKIPATHWAYS (WikiPathways gene sets, 925 gene sets)
    • CP:KEGG_LEGACY (KEGG Legacy gene sets, 186 gene sets)
• C3 (regulatory gene sets, 3714 gene sets)
  • MIR (microRNA targets, 2598 gene sets)
    • MIR:MIRDB (miRDB microRNA targets, 2377 gene sets)
    • MIR:MIR_LEGACY (legacy microRNA targets, 221 gene sets)
  • TFT (all transcription factor targets, 1116 gene sets)
    • TFT:GTRD (GTRD transcription factor targets, 506 gene sets)
    • TFT:TFT_LEGACY (legacy transcription factor targets, 610 gene sets)
• C4 (computational gene sets, 1006 gene sets)
  • 3CA (Curated Cancer Cell Atlas gene sets, 148 gene sets)
  • CGN (cancer gene neighborhoods, 427 gene sets)
  • CM (cancer modules, 431 gene sets)
• C5 (ontology gene sets, 16283 gene sets)
  • GO (Gene Ontology, 10490 gene sets)
    • GO:BP (GO biological process, 7538 gene sets)
    • GO:CC (GO cellular component, 1080 gene sets)
    • GO:MF (GO molecular function, 1872 gene sets)
  • HPO (Human Phenotype Ontology, 5793 gene sets)
• C6 (oncogenic gene sets, 189 gene sets)
• C7 (immunologic gene sets, 5219 gene sets)
  • IMMUNESIGDB (ImmuneSigDB gene sets, 4872 gene sets)
  • VAX (vaccine response gene sets, 347 gene sets)
• C8 (cell type signature gene sets, 866 gene sets)
• C9 (computational perturbation signature gene sets, 62 gene sets)