Mouse Gene Set: MP_ABNORMAL_ALPHA_BETA_INTRAEPITHELIAL_T_CELL_MORPHOLOGY
Standard name
MP_ABNORMAL_ALPHA_BETA_INTRAEPITHELIAL_T_CELL_MORPHOLOGY
Systematic name
MM24340
Brief description
any structural anomaly of an alpha-beta T cell present in columnar epithelia such as in the gastrointestinal tract; intraepithelial T cells often have distinct developmental pathways and activation requirements
Full description or abstract
Collection
M5: Ontology MPO: Mammalian Phenotype Ontology MPO:MP: Mammalian Phenotype
Source publication
Exact source
MP:0008399
Related gene sets
External links
https://www.informatics.jax.org/vocab/mp_ontology/MP:0008399
Filtered by similarity ?
Source species
Mus musculus
Contributed by
Mouse Genome Informatics (MGI) (The Jackson Laboratory (JAX))
Source platform or identifier namespace
MGI_ID
Dataset references
Download gene set
format: grp | gmt | xml | json | TSV metadata
Compute overlaps ?
(show collections to investigate for overlap with this gene set)
Compendia expression profiles ?
NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds )
Mouse Transcriptomic BodyMap compendium
Legacy heatmaps (PNG)
Mouse Transcriptomic BodyMap compendium
Advanced query
Further investigate
these 12 genes
Show members
(show 13 source identifiers mapped to 12 genes)
Source Id
NCBI (Entrez) Gene Id
Gene Symbol
Gene Description
MGI:103080
18703
Pigr
polymeric immunoglobulin receptor [S...
MGI:104798
21926
Tnf
tumor necrosis factor [Source:MGI Sy...
MGI:104856
19885
Rorc
RAR-related orphan receptor gamma [S...
MGI:1333797
12458
Ccr6
C-C motif chemokine receptor 6 [Sour...
MGI:1932027
100038862
Btnl1
butyrophilin-like 1 [Source:MGI Symb...
MGI:5313566
MGI:88334
12503
Cd247
CD247 antigen [Source:MGI Symbol;Acc...
MGI:96448
16019
Ighm
immunoglobulin heavy constant mu [So...
MGI:96548
16183
Il2
interleukin 2 [Source:MGI Symbol;Acc...
MGI:96551
16186
Il2rg
interleukin 2 receptor, gamma chain ...
MGI:96756
16818
Lck
lymphocyte protein tyrosine kinase [...
MGI:97570
18671
Abcb1a
ATP-binding cassette, sub-family B m...
MGI:97810
19264
Ptprc
protein tyrosine phosphatase recepto...
Version history
Creative Commons Attribution 4.0 International License (CC-BY-4.0)
The contents of this gene set are protected by copyright (c) 2004-2026 Broad Institute, Inc., Massachusetts Institute of Technology,
and Regents of the University of California, subject to the terms and conditions of the
Creative Commons Attribution 4.0 International License .
See the full MSigDB license terms here .