Mouse Gene Set: MP_ABNORMAL_SUBSTANTIA_NIGRA_MORPHOLOGY


Standard name MP_ABNORMAL_SUBSTANTIA_NIGRA_MORPHOLOGY
Systematic name MM21225
Brief description any structural anomaly of the layer of grey substance that separates the posterior parts of the cerebral peduncles (tegmentum mesencephali) from the anterior parts; it normally includes a posterior compact part with many pigmented cells (pars compacta) and an anterior reticular part whose cells contain little pigment (pars reticularis)
Full description or abstract  
Collection M5: Ontology
      MPO: Mammalian Phenotype Ontology
            MPO:MP: Mammalian Phenotype
Source publication  
Exact source MP:0000836
Related gene sets  
External links https://www.informatics.jax.org/vocab/mp_ontology/MP:0000836
Filtered by similarity ?
Source species Mus musculus
Contributed by Mouse Genome Informatics (MGI) (The Jackson Laboratory (JAX))
Source platform or
identifier namespace		 MGI_ID
Dataset references  
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds)
Mouse Transcriptomic BodyMap compendium

Legacy heatmaps (PNG)
Mouse Transcriptomic BodyMap compendium
Advanced query Further investigate these 18 genes
Show members (show 19 source identifiers mapped to 18 genes)
Version history  


Creative Commons Attribution 4.0 International License (CC-BY-4.0)

The contents of this gene set are protected by copyright (c) 2004-2026 Broad Institute, Inc., Massachusetts Institute of Technology, and Regents of the University of California, subject to the terms and conditions of the Creative Commons Attribution 4.0 International License.

See the full MSigDB license terms here.