Browse Mouse Gene Sets

Gene set name:

 
  (Enter full or partial name)

By first letter:

 

A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

By collection:

[about the MSigDB Mouse collections]

  • MH (orthology-mapped hallmark gene sets, 50 gene sets)
  • M1 (positional gene sets, 341 gene sets)
  • M2 (curated gene sets, 2664 gene sets)
    • CGP (chemical and genetic pertubations, 963 gene sets)
    • CP (canonical pathways, 1701 gene sets)
  • M3 (regulatory gene sets, 2048 gene sets)
    • GTRD (GTRD transcription factor targets, 279 gene sets)
    • MIRDB (miRDB microRNA targets, 1769 gene sets)
  • M5 (ontology gene sets, 10754 gene sets)
    • GO (Gene Ontology, 10662 gene sets)
      • GO:BP (GO biological process, 7796 gene sets)
      • GO:CC (GO cellular component, 1031 gene sets)
      • GO:MF (GO molecular function, 1835 gene sets)
    • MPT (Mouse Phenotype Ontology MP Tumor, 92 gene sets)
  • M8 (cell type signature gene sets, 233 gene sets)

Click on a gene set name to view its gene set page.

WP_ACE_INHIBITOR_PATHWAY
WP_ACETYLCHOLINE_SYNTHESIS
WP_ADIPOGENESIS_GENES
WP_AFLATOXIN_B1_METABOLISM
WP_ALANINE_AND_ASPARTATE_METABOLISM
WP_ALPHA_6_BETA_4_INTEGRIN_SIGNALIN
G_PATHWAY

WP_ALZHEIMER_39_S_DISEASE
WP_AMINO_ACID_METABOLISM
WP_APOE_AND_MIR_146_IN_INFLAMMATION
_AND_ATHEROSCLEROSIS

WP_APOPTOSIS
WP_APOPTOSIS_MODULATION_BY_HSP70
WP_BDNF_PATHWAY
WP_BIOGENIC_AMINE_SYNTHESIS
WP_BLOOD_CLOTTING_CASCADE
WP_BMP_SIGNALING_PATHWAY_IN_EYELID_
DEVELOPMENT

WP_BURN_WOUND_HEALING
WP_CALCIUM_REGULATION_IN_CARDIAC_CE
LLS

WP_CHEMOKINE_SIGNALING_PATHWAY
WP_CHOLESTEROL_BIOSYNTHESIS
WP_CHOLESTEROL_METABOLISM_WITH_BLOC
H_AND_KANDUTSCH_RUSSELL_PATHWAYS

WP_COMPLEMENT_ACTIVATION_CLASSICAL_
PATHWAY

WP_COMPREHENSIVE_IL_17A_SIGNALING
WP_CYTOKINES_AND_INFLAMMATORY_RESPO
NSE

WP_CYTOPLASMIC_RIBOSOMAL_PROTEINS
WP_DELTA_NOTCH_SIGNALING_PATHWAY
WP_DISTAL_CONVOLUTED_TUBULE_1_DCT1_
CELL

WP_DOPAMINERGIC_NEUROGENESIS
WP_DRAVET_SYNDROME_SCN1A_A1783V_POI
NT_MUTATION_MODEL

WP_DYSREGULATED_MIRNA_TARGETING_IN_
INSULIN_PI3K_AKT_SIGNALING

WP_EBV_LMP1_SIGNALING
WP_EDA_SIGNALING_IN_HAIR_FOLLICLE_D
EVELOPMENT

WP_EGFR1_SIGNALING_PATHWAY
WP_EICOSANOID_LIPID_SYNTHESIS_MAP
WP_EICOSANOID_METABOLISM_VIA_CYCLOO
XYGENASES_COX

WP_EICOSANOID_METABOLISM_VIA_CYTOCH
ROME_P450_MONOOXYGENASES

WP_EICOSANOID_METABOLISM_VIA_LIPOXY
GENASES_LOX

WP_EICOSANOID_SYNTHESIS
WP_ELECTRON_TRANSPORT_CHAIN
WP_ELONGATION_OF_VERY_LONG_CHAIN_FA
TTY_ACIDS

WP_ENDOCHONDRAL_OSSIFICATION
WP_EPO_RECEPTOR_SIGNALING
WP_ERBB_SIGNALING_PATHWAY
WP_ESC_PLURIPOTENCY_PATHWAYS
WP_ESTROGEN_METABOLISM
WP_ESTROGEN_SIGNALING
WP_ETHANOL_METABOLISM_RESULTING_IN_
PRODUCTION_OF_ROS_BY_CYP2E1

WP_EUKARYOTIC_TRANSCRIPTION_INITIAT
ION

WP_EXERCISE_INDUCED_CIRCADIAN_REGUL
ATION

WP_FACTORS_AND_PATHWAYS_AFFECTING_I
NSULIN_LIKE_GROWTH_FACTOR_IGF1_AKT_
SIGNALING

WP_FAS_PATHWAY_AND_STRESS_INDUCTION
_OF_HSP_REGULATION

WP_FATTY_ACID_BETA_OXIDATION
WP_FATTY_ACID_BIOSYNTHESIS
WP_FATTY_ACID_OMEGA_OXIDATION
WP_FATTY_ACID_OXIDATION
WP_FIBRIN_COMPLEMENT_RECEPTOR_3_SIG
NALING_PATHWAY

WP_FOCAL_ADHESION
WP_FOCAL_ADHESION_PI3K_AKT_MTOR_SIG
NALING_PATHWAY

WP_FOLIC_ACID_NETWORK
WP_G13_SIGNALING_PATHWAY
WP_G1_TO_S_CELL_CYCLE_CONTROL
WP_G_PROTEIN_SIGNALING_PATHWAYS
WP_GDNF_RET_SIGNALING_AXIS
WP_GENE_REGULATORY_NETWORK_MODELLIN
G_SOMITOGENESIS

WP_GLUCURONIDATION
WP_GLUTATHIONE_AND_ONE_CARBON_METAB
OLISM

WP_GLUTATHIONE_METABOLISM
WP_GLYCEROLIPIDS_AND_GLYCEROPHOSPHO
LIPIDS_WP4345

WP_GLYCEROLIPIDS_AND_GLYCEROPHOSPHO
LIPIDS_WP5296

WP_GLYCOGEN_METABOLISM
WP_GLYCOLYSIS_AND_GLUCONEOGENESIS
WP_GPCRS_CLASS_A_RHODOPSIN_LIKE
WP_GPCRS_CLASS_B_SECRETIN_LIKE
WP_GPCRS_CLASS_C_METABOTROPIC_GLUTA
MATE_PHEROMONE

WP_GPCRS_NON_ODORANT
WP_GPCRS_ODORANT
WP_GPCRS_ORPHAN
WP_GPCRS_OTHER
WP_GPCRS_PEPTIDE
WP_GPCRS_SMALL_LIGAND
WP_HEART_DEVELOPMENT
WP_HEDGEHOG_SIGNALING_PATHWAY
WP_HEME_BIOSYNTHESIS
WP_HFE_EFFECT_ON_HEPCIDIN_PRODUCTIO
N

WP_HISTONE_MODIFICATIONS
WP_HOMOLOGOUS_RECOMBINATION
WP_HYPERTROPHY_MODEL
WP_HYPOXIA_DEPENDENT_DIFFERENTIATIO
N_OF_MYOBLASTS

WP_HYPOXIA_DEPENDENT_PROLIFERATION_
OF_MYOBLASTS

WP_HYPOXIA_DEPENDENT_SELF_RENEWAL_O
F_MYOBLASTS

WP_ID_SIGNALING_PATHWAY
WP_IL_1_SIGNALING_PATHWAY
WP_IL_2_SIGNALING_PATHWAY
WP_IL_3_SIGNALING_PATHWAY
WP_IL_5_SIGNALING_PATHWAY
WP_IL_6_SIGNALING_PATHWAY
WP_IL_7_SIGNALING_PATHWAY
WP_IL_9_SIGNALING_PATHWAY
WP_INFLAMMATORY_RESPONSE_PATHWAY
WP_INSULIN_SIGNALING
WP_INTEGRIN_MEDIATED_CELL_ADHESION
WP_IRON_HOMEOSTASIS
WP_KENNEDY_PATHWAY
WP_KIT_RECEPTOR_SIGNALING_PATHWAY
WP_LEPTIN_AND_ADIPONECTIN
WP_LEPTIN_INSULIN_SIGNALING_OVERLAP
WP_LUNG_FIBROSIS
WP_MACROPHAGE_MARKERS
WP_MAPK_CASCADE
WP_MAPK_SIGNALING_PATHWAY
WP_MATRIX_METALLOPROTEINASES
WP_MECHANISMS_ASSOCIATED_WITH_PLURI
POTENCY

WP_MECP2_AND_ASSOCIATED_RETT_SYNDRO
ME

WP_METAPATHWAY_BIOTRANSFORMATION
WP_METHYLATION
WP_MICROGLIA_PATHOGEN_PHAGOCYTOSIS_
PATHWAY

WP_MICRORNAS_IN_CARDIOMYOCYTE_HYPER
TROPHY

WP_MIR_127_IN_MESENDODERM_DIFFERENT
IATION

WP_MIR_193A_AND_MVP_IN_COLON_CANCER
_METASTASIS

WP_MIRNAS_AND_TFS_IN_IPS_CELL_GENER
ATION

WP_MISMATCH_REPAIR
WP_MITOCHONDRIAL_GENE_EXPRESSION
WP_MITOCHONDRIAL_LONG_CHAIN_FATTY_A
CID_BETA_OXIDATION

WP_MONOAMINE_GPCRS
WP_MRNA_PROCESSING
WP_MYOMETRIAL_RELAXATION_AND_CONTRA
CTION_PATHWAYS

WP_NEURAL_CREST_DIFFERENTIATION
WP_NOD_LIKE_RECEPTOR_NLR_SIGNALING_
PATHWAY

WP_NON_HOMOLOGOUS_END_JOINING
WP_NOTCH_SIGNALING_PATHWAY
WP_NOVEL_JUN_DMP1_PATHWAY
WP_NUCLEAR_RECEPTORS
WP_NUCLEAR_RECEPTORS_IN_LIPID_METAB
OLISM_AND_TOXICITY

WP_NUCLEOTIDE_GPCRS
WP_OMEGA_3_OMEGA_6_FATTY_ACID_SYNTH
ESIS

WP_OMEGA_9_FATTY_ACID_SYNTHESIS
WP_ONE_CARBON_METABOLISM
WP_ONE_CARBON_METABOLISM_AND_RELATE
D_PATHWAYS

WP_OSTEOBLAST_SIGNALING
WP_OSTEOCLAST_SIGNALING
WP_OVARIAN_INFERTILITY
WP_OXIDATION_BY_CYTOCHROME_P450
WP_OXIDATIVE_DAMAGE_RESPONSE
WP_OXIDATIVE_PHOSPHORYLATION
WP_OXIDATIVE_STRESS_AND_REDOX_PATHW
AY

WP_OXIDATIVE_STRESS_RESPONSE
WP_P38_MAPK_SIGNALING_PATHWAY
WP_P53_SIGNALING
WP_PARKINSON_39_S_DISEASE
WP_PENTOSE_PHOSPHATE_PATHWAY
WP_PEROXIREDOXIN_2_INDUCED_OVARIAN_
FAILURE

WP_PPAR_SIGNALING_PATHWAY
WP_PRIMARY_FOCAL_SEGMENTAL_GLOMERUL
OSCLEROSIS_FSGS

WP_PROSTAGLANDIN_SYNTHESIS_AND_REGU
LATION

WP_PROTEASOME_DEGRADATION
WP_PTF1A_RELATED_REGULATORY_PATHWAY
WP_PURINE_METABOLISM
WP_REGULATION_OF_ACTIN_CYTOSKELETON
WP_REGULATION_OF_CARDIAC_HYPERTROPH
Y_BY_MIR_208

WP_RETINOL_METABOLISM
WP_ROBO4_AND_VEGF_SIGNALING_PATHWAY
S_CROSSTALK

WP_SELENIUM_METABOLISM_SELENOPROTEI
NS

WP_SELENIUM_MICRONUTRIENT_NETWORK
WP_SEROTONIN_AND_ANXIETY
WP_SEROTONIN_AND_ANXIETY_RELATED_EV
ENTS

WP_SIDS_SUSCEPTIBILITY_PATHWAYS
WP_SIGNAL_TRANSDUCTION_OF_S1P_RECEP
TOR

WP_SPHINGOLIPID_METABOLISM_INTEGRAT
ED_PATHWAY

WP_SPHINGOLIPID_METABOLISM_OVERVIEW
WP_SPINAL_CORD_INJURY
WP_SPLICING_FACTOR_NOVA_REGULATED_S
YNAPTIC_PROTEINS

WP_SREBF_AND_MIR33_IN_CHOLESTEROL_A
ND_LIPID_HOMEOSTASIS

WP_STATIN_PATHWAY
WP_STEROID_BIOSYNTHESIS
WP_SYNTHESIS_AND_DEGRADATION_OF_KET
ONE_BODIES

WP_TCA_CYCLE
WP_TGF_BETA_SIGNALING_PATHWAY
WP_TOLL_LIKE_RECEPTOR_SIGNALING
WP_TRANSCRIPTIONAL_ACTIVATION_BY_NF
E2L2_IN_RESPONSE_TO_PHYTOCHEMICALS

WP_TRANSLATION_FACTORS
WP_TRIACYLGLYCERIDE_SYNTHESIS
WP_TRYPTOPHAN_METABOLISM
WP_TYPE_II_INTERFERON_SIGNALING_IFN
G

WP_TYROBP_CAUSAL_NETWORK_IN_MICROGL
IA

WP_WHITE_FAT_CELL_DIFFERENTIATION
WP_WNT_SIGNALING_IN_KIDNEY_DISEASE
WP_WNT_SIGNALING_PATHWAY_AND_PLURIP
OTENCY

WP_WNT_SIGNALING_PATHWAY_WP403
WP_WNT_SIGNALING_PATHWAY_WP539