Browse Mouse Gene Sets

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By collection:

[about the MSigDB Mouse collections]

  • MH (orthology-mapped hallmark gene sets, 50 gene sets)
  • M1 (positional gene sets, 341 gene sets)
  • M2 (curated gene sets, 2619 gene sets)
    • CGP (chemical and genetic pertubations, 932 gene sets)
    • CP (canonical pathways, 1687 gene sets)
  • M3 (regulatory gene sets, 2042 gene sets)
    • GTRD (GTRD transcription factor targets, 273 gene sets)
    • MIRDB (miRDB microRNA targets, 1769 gene sets)
  • M5 (ontology gene sets, 10652 gene sets)
    • GO (Gene Ontology, 10560 gene sets)
      • GO:BP (GO biological process, 7775 gene sets)
      • GO:CC (GO cellular component, 1039 gene sets)
      • GO:MF (GO molecular function, 1746 gene sets)
    • MPT (Mouse Phenotype Ontology MP Tumor, 92 gene sets)
  • M8 (cell type signature gene sets, 214 gene sets)

Click on a gene set name to view its gene set page.

DESCARTES_ORGANOGENESIS_CARDIAC_MUS
CLE_LINEAGES

DESCARTES_ORGANOGENESIS_CHOLINERGIC
_NEURONS

DESCARTES_ORGANOGENESIS_CHONDROCYTE
_PROGENITORS

DESCARTES_ORGANOGENESIS_CHONDROCYTE
S_AND_OSTEOBLASTS

DESCARTES_ORGANOGENESIS_CONNECTIVE_
TISSUE_PROGENITOR

DESCARTES_ORGANOGENESIS_DEFINITIVE_
ERYTHROID_LINEAGE

DESCARTES_ORGANOGENESIS_EARLY_MESEN
CHYME

DESCARTES_ORGANOGENESIS_ENDOTHELIAL
_CELLS

DESCARTES_ORGANOGENESIS_EPENDYMAL_C
ELL

DESCARTES_ORGANOGENESIS_EPITHELIAL_
CELLS

DESCARTES_ORGANOGENESIS_EXCITATORY_
NEURONS

DESCARTES_ORGANOGENESIS_GRANULE_NEU
RONS

DESCARTES_ORGANOGENESIS_HEPATOCYTES
DESCARTES_ORGANOGENESIS_INHIBITORY_
INTERNEURONS

DESCARTES_ORGANOGENESIS_INHIBITORY_
NEURON_PROGENITORS

DESCARTES_ORGANOGENESIS_INHIBITORY_
NEURONS

DESCARTES_ORGANOGENESIS_INTERMEDIAT
E_MESODERM

DESCARTES_ORGANOGENESIS_ISTHMIC_ORG
ANIZER_CELLS

DESCARTES_ORGANOGENESIS_JAW_AND_TOO
TH_PROGENITORS

DESCARTES_ORGANOGENESIS_LENS
DESCARTES_ORGANOGENESIS_LIMB_MESENC
HYME

DESCARTES_ORGANOGENESIS_MEGAKARYOCY
TES

DESCARTES_ORGANOGENESIS_MELANOCYTES
DESCARTES_ORGANOGENESIS_MYOCYTES
DESCARTES_ORGANOGENESIS_NEURAL_PROG
ENITOR_CELLS

DESCARTES_ORGANOGENESIS_NEURAL_TUBE
DESCARTES_ORGANOGENESIS_NOTOCHORD_C
ELLS

DESCARTES_ORGANOGENESIS_NUETROPHILS
DESCARTES_ORGANOGENESIS_OLIGODENDRO
CYTE_PROGENITORS

DESCARTES_ORGANOGENESIS_OSTEOBLASTS
DESCARTES_ORGANOGENESIS_POSTMITOTIC
_PREMATURE_NEURONS

DESCARTES_ORGANOGENESIS_PREMATURE_O
LIGODENDROCYTE

DESCARTES_ORGANOGENESIS_PRIMITIVE_E
RYTHROID_LINEAGE

DESCARTES_ORGANOGENESIS_RADIAL_GLIA
DESCARTES_ORGANOGENESIS_SCHWANN_CEL
L_PRECURSOR

DESCARTES_ORGANOGENESIS_SENSORY_NEU
RONS

DESCARTES_ORGANOGENESIS_STROMAL_CEL
LS

DESCARTES_ORGANOGENESIS_WHITE_BLOOD
_CELLS

TABULA_MURIS_SENIS_AORTA_AORTIC_END
OTHELIAL_CELL_AGEING

TABULA_MURIS_SENIS_AORTA_FIBROBLAST
_OF_CARDIAC_TISSUE_AGEING

TABULA_MURIS_SENIS_AORTA_PROFESSION
AL_ANTIGEN_PRESENTING_CELL_AGEING

TABULA_MURIS_SENIS_BLADDER_BLADDER_
CELL_AGEING

TABULA_MURIS_SENIS_BLADDER_BLADDER_
UROTHELIAL_CELL_AGEING

TABULA_MURIS_SENIS_BLADDER_ENDOTHEL
IAL_CELL_AGEING

TABULA_MURIS_SENIS_BLADDER_LEUKOCYT
E_AGEING

TABULA_MURIS_SENIS_BRAIN_MYELOID_MA
CROPHAGE_AGEING

TABULA_MURIS_SENIS_BRAIN_MYELOID_MI
CROGLIAL_CELL_AGEING

TABULA_MURIS_SENIS_BRAIN_NON_MYELOI
D_ASTROCYTE_AGEING

TABULA_MURIS_SENIS_BRAIN_NON_MYELOI
D_BRAIN_PERICYTE_AGEING

TABULA_MURIS_SENIS_BRAIN_NON_MYELOI
D_ENDOTHELIAL_CELL_AGEING

TABULA_MURIS_SENIS_BRAIN_NON_MYELOI
D_INTERNEURON_AGEING

TABULA_MURIS_SENIS_BRAIN_NON_MYELOI
D_NEURON_AGEING

TABULA_MURIS_SENIS_BRAIN_NON_MYELOI
D_OLIGODENDROCYTE_AGEING

TABULA_MURIS_SENIS_BRAIN_NON_MYELOI
D_OLIGODENDROCYTE_PRECURSOR_CELL_AG
EING

TABULA_MURIS_SENIS_BROWN_ADIPOSE_TI
SSUE_B_CELL_AGEING

TABULA_MURIS_SENIS_BROWN_ADIPOSE_TI
SSUE_ENDOTHELIAL_CELL_AGEING

TABULA_MURIS_SENIS_BROWN_ADIPOSE_TI
SSUE_MESENCHYMAL_STEM_CELL_OF_ADIPO
SE_AGEING

TABULA_MURIS_SENIS_BROWN_ADIPOSE_TI
SSUE_MYELOID_CELL_AGEING

TABULA_MURIS_SENIS_BROWN_ADIPOSE_TI
SSUE_T_CELL_AGEING

TABULA_MURIS_SENIS_DIAPHRAGM_B_CELL
_AGEING

TABULA_MURIS_SENIS_DIAPHRAGM_ENDOTH
ELIAL_CELL_AGEING

TABULA_MURIS_SENIS_DIAPHRAGM_MACROP
HAGE_AGEING

TABULA_MURIS_SENIS_DIAPHRAGM_MESENC
HYMAL_STEM_CELL_AGEING

TABULA_MURIS_SENIS_DIAPHRAGM_SKELET
AL_MUSCLE_SATELLITE_CELL_AGEING

TABULA_MURIS_SENIS_GONADAL_ADIPOSE_
TISSUE_B_CELL_AGEING

TABULA_MURIS_SENIS_GONADAL_ADIPOSE_
TISSUE_ENDOTHELIAL_CELL_AGEING

TABULA_MURIS_SENIS_GONADAL_ADIPOSE_
TISSUE_MESENCHYMAL_STEM_CELL_OF_ADI
POSE_AGEING

TABULA_MURIS_SENIS_GONADAL_ADIPOSE_
TISSUE_MYELOID_CELL_AGEING

TABULA_MURIS_SENIS_GONADAL_ADIPOSE_
TISSUE_T_CELL_AGEING

TABULA_MURIS_SENIS_HEART_AND_AORTA_
CARDIOMYOCYTE_AGEING

TABULA_MURIS_SENIS_HEART_AND_AORTA_
ENDOCARDIAL_CELL_AGEING

TABULA_MURIS_SENIS_HEART_AND_AORTA_
ENDOTHELIAL_CELL_OF_CORONARY_ARTERY
_AGEING

TABULA_MURIS_SENIS_HEART_AND_AORTA_
FIBROBLAST_OF_CARDIAC_TISSUE_AGEING

TABULA_MURIS_SENIS_HEART_AND_AORTA_
LEUKOCYTE_AGEING

TABULA_MURIS_SENIS_HEART_AND_AORTA_
SMOOTH_MUSCLE_CELL_AGEING

TABULA_MURIS_SENIS_HEART_ATRIAL_MYO
CYTE_AGEING

TABULA_MURIS_SENIS_HEART_ENDOCARDIA
L_CELL_AGEING

TABULA_MURIS_SENIS_HEART_ENDOTHELIA
L_CELL_OF_CORONARY_ARTERY_AGEING

TABULA_MURIS_SENIS_HEART_FIBROBLAST
_OF_CARDIAC_TISSUE_AGEING

TABULA_MURIS_SENIS_HEART_MONOCYTE_A
GEING

TABULA_MURIS_SENIS_HEART_T_CELL_AGE
ING

TABULA_MURIS_SENIS_HEART_VALVE_CELL
_AGEING

TABULA_MURIS_SENIS_HEART_VENTRICULA
R_MYOCYTE_AGEING

TABULA_MURIS_SENIS_KIDNEY_BRUSH_CEL
L_AGEING

TABULA_MURIS_SENIS_KIDNEY_EPITHELIA
L_CELL_OF_PROXIMAL_TUBULE_AGEING

TABULA_MURIS_SENIS_KIDNEY_FENESTRAT
ED_CELL_AGEING

TABULA_MURIS_SENIS_KIDNEY_FIBROBLAS
T_AGEING

TABULA_MURIS_SENIS_KIDNEY_KIDNEY_CO
LLECTING_DUCT_EPITHELIAL_CELL_AGEIN
G

TABULA_MURIS_SENIS_KIDNEY_KIDNEY_CO
LLECTING_DUCT_PRINCIPAL_CELL_AGEING

TABULA_MURIS_SENIS_KIDNEY_KIDNEY_CO
RTEX_ARTERY_CELL_AGEING

TABULA_MURIS_SENIS_KIDNEY_KIDNEY_DI
STAL_CONVOLUTED_TUBULE_EPITHELIAL_C
ELL_AGEING

TABULA_MURIS_SENIS_KIDNEY_KIDNEY_LO
OP_OF_HENLE_ASCENDING_LIMB_EPITHELI
AL_CELL_AGEING

TABULA_MURIS_SENIS_KIDNEY_KIDNEY_LO
OP_OF_HENLE_THICK_ASCENDING_LIMB_EP
ITHELIAL_CELL_AGEING

TABULA_MURIS_SENIS_KIDNEY_KIDNEY_ME
SANGIAL_CELL_AGEING

TABULA_MURIS_SENIS_KIDNEY_KIDNEY_PR
OXIMAL_CONVOLUTED_TUBULE_EPITHELIAL
_CELL_AGEING

TABULA_MURIS_SENIS_KIDNEY_MACROPHAG
E_AGEING

TABULA_MURIS_SENIS_KIDNEY_PODOCYTE_
AGEING

TABULA_MURIS_SENIS_KIDNEY_T_CELL_AG
EING

TABULA_MURIS_SENIS_LARGE_INTESTINE_
BRUSH_CELL_OF_EPITHELIUM_PROPER_OF_
LARGE_INTESTINE_AGEING

TABULA_MURIS_SENIS_LARGE_INTESTINE_
ENTEROCYTE_OF_EPITHELIUM_OF_LARGE_I
NTESTINE_AGEING

TABULA_MURIS_SENIS_LARGE_INTESTINE_
INTESTINAL_CRYPT_STEM_CELL_AGEING

TABULA_MURIS_SENIS_LARGE_INTESTINE_
LARGE_INTESTINE_GOBLET_CELL_AGEING

TABULA_MURIS_SENIS_LARGE_INTESTINE_
SECRETORY_CELL_AGEING

TABULA_MURIS_SENIS_LIMB_MUSCLE_B_CE
LL_AGEING

TABULA_MURIS_SENIS_LIMB_MUSCLE_ENDO
THELIAL_CELL_AGEING

TABULA_MURIS_SENIS_LIMB_MUSCLE_MACR
OPHAGE_AGEING

TABULA_MURIS_SENIS_LIMB_MUSCLE_MESE
NCHYMAL_STEM_CELL_AGEING

TABULA_MURIS_SENIS_LIMB_MUSCLE_SCHW
ANN_CELL_AGEING

TABULA_MURIS_SENIS_LIMB_MUSCLE_SKEL
ETAL_MUSCLE_SATELLITE_CELL_AGEING

TABULA_MURIS_SENIS_LIMB_MUSCLE_SMOO
TH_MUSCLE_CELL_AGEING

TABULA_MURIS_SENIS_LIMB_MUSCLE_T_CE
LL_AGEING

TABULA_MURIS_SENIS_LIVER_ENDOTHELIA
L_CELL_OF_HEPATIC_SINUSOID_AGEING

TABULA_MURIS_SENIS_LIVER_HEPATOCYTE
_AGEING

TABULA_MURIS_SENIS_LIVER_MATURE_NK_
T_CELL_AGEING

TABULA_MURIS_SENIS_LIVER_MYELOID_LE
UKOCYTE_AGEING

TABULA_MURIS_SENIS_LIVER_NK_CELL_AG
EING

TABULA_MURIS_SENIS_LUNG_ADVENTITIAL
_CELL_AGEING

TABULA_MURIS_SENIS_LUNG_ALVEOLAR_MA
CROPHAGE_AGEING

TABULA_MURIS_SENIS_LUNG_B_CELL_AGEI
NG

TABULA_MURIS_SENIS_LUNG_BRONCHIAL_S
MOOTH_MUSCLE_CELL_AGEING

TABULA_MURIS_SENIS_LUNG_CD4_POSITIV
E_ALPHA_BETA_T_CELL_AGEING

TABULA_MURIS_SENIS_LUNG_CD8_POSITIV
E_ALPHA_BETA_T_CELL_AGEING

TABULA_MURIS_SENIS_LUNG_CLASSICAL_M
ONOCYTE_AGEING

TABULA_MURIS_SENIS_LUNG_ENDOTHELIAL
_CELL_OF_LYMPHATIC_VESSEL_AGEING

TABULA_MURIS_SENIS_LUNG_FIBROBLAST_
OF_LUNG_AGEING

TABULA_MURIS_SENIS_LUNG_INTERMEDIAT
E_MONOCYTE_AGEING

TABULA_MURIS_SENIS_LUNG_MATURE_NK_T
_CELL_AGEING

TABULA_MURIS_SENIS_LUNG_MYELOID_DEN
DRITIC_CELL_AGEING

TABULA_MURIS_SENIS_LUNG_NEUTROPHIL_
AGEING

TABULA_MURIS_SENIS_LUNG_NK_CELL_AGE
ING

TABULA_MURIS_SENIS_LUNG_NON_CLASSIC
AL_MONOCYTE_AGEING

TABULA_MURIS_SENIS_LUNG_PULMONARY_I
NTERSTITIAL_FIBROBLAST_AGEING

TABULA_MURIS_SENIS_LUNG_SMOOTH_MUSC
LE_CELL_OF_THE_PULMONARY_ARTERY_AGE
ING

TABULA_MURIS_SENIS_LUNG_T_CELL_AGEI
NG

TABULA_MURIS_SENIS_LUNG_TYPE_II_PNE
UMOCYTE_AGEING

TABULA_MURIS_SENIS_LUNG_VEIN_ENDOTH
ELIAL_CELL_AGEING

TABULA_MURIS_SENIS_MAMMARY_GLAND_B_
CELL_AGEING

TABULA_MURIS_SENIS_MAMMARY_GLAND_BA
SAL_CELL_AGEING

TABULA_MURIS_SENIS_MAMMARY_GLAND_EN
DOTHELIAL_CELL_AGEING

TABULA_MURIS_SENIS_MAMMARY_GLAND_LU
MINAL_EPITHELIAL_CELL_OF_MAMMARY_GL
AND_AGEING

TABULA_MURIS_SENIS_MAMMARY_GLAND_MA
CROPHAGE_AGEING

TABULA_MURIS_SENIS_MAMMARY_GLAND_ST
ROMAL_CELL_AGEING

TABULA_MURIS_SENIS_MAMMARY_GLAND_T_
CELL_AGEING

TABULA_MURIS_SENIS_MARROW_BASOPHIL_
AGEING

TABULA_MURIS_SENIS_MARROW_CD4_POSIT
IVE_ALPHA_BETA_T_CELL_AGEING

TABULA_MURIS_SENIS_MARROW_EARLY_PRO
_B_CELL_AGEING

TABULA_MURIS_SENIS_MARROW_ERYTHROBL
AST_AGEING

TABULA_MURIS_SENIS_MARROW_GRANULOCY
TE_AGEING

TABULA_MURIS_SENIS_MARROW_GRANULOCY
TE_MONOCYTE_PROGENITOR_CELL_AGEING

TABULA_MURIS_SENIS_MARROW_GRANULOCY
TOPOIETIC_CELL_AGEING

TABULA_MURIS_SENIS_MARROW_HEMATOPOI
ETIC_PRECURSOR_CELL_AGEING

TABULA_MURIS_SENIS_MARROW_HEMATOPOI
ETIC_STEM_CELL_AGEING

TABULA_MURIS_SENIS_MARROW_IMMATURE_
B_CELL_AGEING

TABULA_MURIS_SENIS_MARROW_LATE_PRO_
B_CELL_AGEING

TABULA_MURIS_SENIS_MARROW_MACROPHAG
E_AGEING

TABULA_MURIS_SENIS_MARROW_MATURE_AL
PHA_BETA_T_CELL_AGEING

TABULA_MURIS_SENIS_MARROW_MEGAKARYO
CYTE_ERYTHROID_PROGENITOR_CELL_AGEI
NG

TABULA_MURIS_SENIS_MARROW_MONOCYTE_
AGEING

TABULA_MURIS_SENIS_MARROW_NAIVE_B_C
ELL_AGEING

TABULA_MURIS_SENIS_MARROW_NAIVE_T_C
ELL_AGEING

TABULA_MURIS_SENIS_MARROW_NK_CELL_A
GEING

TABULA_MURIS_SENIS_MARROW_PRECURSOR
_B_CELL_AGEING

TABULA_MURIS_SENIS_MARROW_PROERYTHR
OBLAST_AGEING

TABULA_MURIS_SENIS_MARROW_PROMONOCY
TE_AGEING

TABULA_MURIS_SENIS_MESENTERIC_ADIPO
SE_TISSUE_B_CELL_AGEING

TABULA_MURIS_SENIS_MESENTERIC_ADIPO
SE_TISSUE_CD4_POSITIVE_ALPHA_BETA_T
_CELL_AGEING

TABULA_MURIS_SENIS_MESENTERIC_ADIPO
SE_TISSUE_CD8_POSITIVE_ALPHA_BETA_T
_CELL_AGEING

TABULA_MURIS_SENIS_MESENTERIC_ADIPO
SE_TISSUE_ENDOTHELIAL_CELL_AGEING

TABULA_MURIS_SENIS_MESENTERIC_ADIPO
SE_TISSUE_MACROPHAGE_AGEING

TABULA_MURIS_SENIS_MESENTERIC_ADIPO
SE_TISSUE_MESENCHYMAL_STEM_CELL_OF_
ADIPOSE_AGEING

TABULA_MURIS_SENIS_MESENTERIC_ADIPO
SE_TISSUE_MYELOID_CELL_AGEING

TABULA_MURIS_SENIS_PANCREAS_ENDOTHE
LIAL_CELL_AGEING

TABULA_MURIS_SENIS_PANCREAS_LEUKOCY
TE_AGEING

TABULA_MURIS_SENIS_PANCREAS_PANCREA
TIC_ACINAR_CELL_AGEING

TABULA_MURIS_SENIS_PANCREAS_PANCREA
TIC_ALPHA_CELL_AGEING

TABULA_MURIS_SENIS_PANCREAS_PANCREA
TIC_BETA_CELL_AGEING

TABULA_MURIS_SENIS_PANCREAS_PANCREA
TIC_DELTA_CELL_AGEING

TABULA_MURIS_SENIS_PANCREAS_PANCREA
TIC_DUCTAL_CELL_AGEING

TABULA_MURIS_SENIS_PANCREAS_PANCREA
TIC_POLYPEPTIDE_CELL_AGEING

TABULA_MURIS_SENIS_PANCREAS_PANCREA
TIC_STELLATE_CELL_AGEING

TABULA_MURIS_SENIS_SKIN_BASAL_CELL_
OF_EPIDERMIS_AGEING

TABULA_MURIS_SENIS_SKIN_BULGE_KERAT
INOCYTE_AGEING

TABULA_MURIS_SENIS_SKIN_EPIDERMAL_C
ELL_AGEING

TABULA_MURIS_SENIS_SPLEEN_B_CELL_AG
EING

TABULA_MURIS_SENIS_SPLEEN_CD4_POSIT
IVE_ALPHA_BETA_T_CELL_AGEING

TABULA_MURIS_SENIS_SPLEEN_CD8_POSIT
IVE_ALPHA_BETA_T_CELL_AGEING

TABULA_MURIS_SENIS_SPLEEN_GRANULOCY
TE_AGEING

TABULA_MURIS_SENIS_SPLEEN_MACROPHAG
E_AGEING

TABULA_MURIS_SENIS_SPLEEN_MACROPHAG
E_DENDRITIC_CELL_PROGENITOR_AGEING

TABULA_MURIS_SENIS_SPLEEN_MATURE_NK
_T_CELL_AGEING

TABULA_MURIS_SENIS_SPLEEN_MEGAKARYO
CYTE_ERYTHROID_PROGENITOR_CELL_AGEI
NG

TABULA_MURIS_SENIS_SPLEEN_NK_CELL_A
GEING

TABULA_MURIS_SENIS_SPLEEN_PLASMA_CE
LL_AGEING

TABULA_MURIS_SENIS_SPLEEN_PROERYTHR
OBLAST_AGEING

TABULA_MURIS_SENIS_SPLEEN_T_CELL_AG
EING

TABULA_MURIS_SENIS_SUBCUTANEOUS_ADI
POSE_TISSUE_B_CELL_AGEING

TABULA_MURIS_SENIS_SUBCUTANEOUS_ADI
POSE_TISSUE_ENDOTHELIAL_CELL_AGEING

TABULA_MURIS_SENIS_SUBCUTANEOUS_ADI
POSE_TISSUE_EPITHELIAL_CELL_AGEING

TABULA_MURIS_SENIS_SUBCUTANEOUS_ADI
POSE_TISSUE_MESENCHYMAL_STEM_CELL_O
F_ADIPOSE_AGEING

TABULA_MURIS_SENIS_SUBCUTANEOUS_ADI
POSE_TISSUE_MYELOID_CELL_AGEING

TABULA_MURIS_SENIS_THYMUS_DN4_THYMO
CYTE_AGEING

TABULA_MURIS_SENIS_THYMUS_IMMATURE_
T_CELL_AGEING

TABULA_MURIS_SENIS_THYMUS_PROFESSIO
NAL_ANTIGEN_PRESENTING_CELL_AGEING

TABULA_MURIS_SENIS_THYMUS_THYMOCYTE
_AGEING

TABULA_MURIS_SENIS_TONGUE_BASAL_CEL
L_OF_EPIDERMIS_AGEING

TABULA_MURIS_SENIS_TONGUE_KERATINOC
YTE_AGEING

TABULA_MURIS_SENIS_TONGUE_LANGERHAN
S_CELL_AGEING

TABULA_MURIS_SENIS_TRACHEA_BASAL_EP
ITHELIAL_CELL_OF_TRACHEOBRONCHIAL_T
REE_AGEING

TABULA_MURIS_SENIS_TRACHEA_ENDOTHEL
IAL_CELL_AGEING

TABULA_MURIS_SENIS_TRACHEA_FIBROBLA
ST_AGEING

TABULA_MURIS_SENIS_TRACHEA_GRANULOC
YTE_AGEING

TABULA_MURIS_SENIS_TRACHEA_MACROPHA
GE_AGEING

TABULA_MURIS_SENIS_TRACHEA_T_CELL_A
GEING

TABULA_MURIS_SENISTRACHEA_SMOOTH_MU
SCLE_CELL_OF_TRACHEA_AGEING