DatasetDiabetes_collapsed.gct
PhenotypeNGT
GeneSetC2.symbols.gmt#Electron_Transport_Chain
Enrichment Score (ES)0.614574
Normalized Enrichment Score (NES)1.8894085
Nominal p-value0.018058691
FDR q-value0.04393733
FWER p-Value0.122
Table: GSEA Results Summary

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERESCORE_ENRICHMENT
1NDUFA2NDUFA2
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa870.4590.0218Yes
2NDUFB2NDUFB2
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa1020.4460.0477Yes
3COX7A1COX7A1
StanfordSource,  GeneCards
cytochrome c oxidase subunit VIIa polypeptide 1 (muscle)1230.4320.0723Yes
4ATP5EATP5E
StanfordSource,  GeneCards
ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit1590.4090.0946Yes
5NDUFB6NDUFB6
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa1650.4060.1186Yes
6ATP5OATP5O
StanfordSource,  GeneCards
ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit (oligomycin sensitivity conferring protein)2170.3920.1388Yes
7NDUFB8NDUFB8
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa2390.3870.1607Yes
8NDUFB1NDUFB1
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa2440.3850.1836Yes
9QP-CQP-C
StanfordSource,  GeneCards
low molecular mass ubiquinone-binding protein (9.5kD)2700.3770.2046Yes
10NDUFS5NDUFS5
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)2910.3720.2257Yes
11COX7CCOX7C
StanfordSource,  GeneCards
cytochrome c oxidase subunit VIIc3630.3530.2422Yes
12COX7BCOX7B
StanfordSource,  GeneCards
cytochrome c oxidase subunit VIIb3660.3530.2633Yes
13UQCRUQCR
StanfordSource,  GeneCards
ubiquinol-cytochrome c reductase (6.4kD) subunit3760.3500.2838Yes
14ATP5LATP5L
StanfordSource,  GeneCards
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g3910.3480.3037Yes
15ATP5IATP5I
StanfordSource,  GeneCards
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit e4140.3420.3229Yes
16ATP5SATP5S
StanfordSource,  GeneCards
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s (factor B)4670.3320.3394Yes
17NDUFA7NDUFA7
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa4840.3300.3582Yes
18COX7A2COX7A2
StanfordSource,  GeneCards
cytochrome c oxidase subunit VIIa polypeptide 2 (liver)5570.3170.3725Yes
19NDUFA10NDUFA10
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa8170.2890.3726Yes
20NDUFS6NDUFS6
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)9190.2800.3827Yes
21NDUFS8NDUFS8
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)9400.2780.3980Yes
22SLC25A5SLC25A5
StanfordSource,  GeneCards
solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 59600.2760.4134Yes
23UQCRBUQCRB
StanfordSource,  GeneCards
ubiquinol-cytochrome c reductase binding protein10220.2700.4256Yes
24COX6CCOX6C
StanfordSource,  GeneCards
cytochrome c oxidase subunit VIc11150.2630.4352Yes
25NDUFC1NDUFC1
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa11200.2620.4507Yes
26NDUFA6NDUFA6
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa11260.2620.4662Yes
27COX7A2LCOX7A2L
StanfordSource,  GeneCards
cytochrome c oxidase subunit VIIa polypeptide 2 like11860.2570.4777Yes
28ATP5J2ATP5J2
StanfordSource,  GeneCards
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit f, isoform 212060.2550.4918Yes
29NDUFA3NDUFA3
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa12090.2550.5070Yes
30HSPC051HSPC051
StanfordSource,  GeneCards
ubiquinol-cytochrome c reductase complex (7.2 kD)12330.2540.5207Yes
31ATP5HATP5H
StanfordSource,  GeneCards
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d12750.2500.5330Yes
32NDUFB5NDUFB5
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa13720.2440.5413Yes
33COX6A1COX6A1
StanfordSource,  GeneCards
cytochrome c oxidase subunit VIa polypeptide 115200.2330.5455Yes
34NDUFAB1NDUFAB1
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa15720.2290.5559Yes
35SDHCSDHC
StanfordSource,  GeneCards
succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa16960.2200.5609Yes
36ATP5F1ATP5F1
StanfordSource,  GeneCards
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 117700.2160.5690Yes
37NDUFA8NDUFA8
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa17800.2160.5814Yes
38COX4I1COX4I1
StanfordSource,  GeneCards
cytochrome c oxidase subunit IV isoform 121390.1960.5693Yes
39NDUFA4NDUFA4
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa21810.1940.5782Yes
40SDHBSDHB
StanfordSource,  GeneCards
succinate dehydrogenase complex, subunit B, iron sulfur (Ip)22220.1920.5871Yes
41NDUFS7NDUFS7
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)22550.1910.5964Yes
42COX11COX11
StanfordSource,  GeneCards
COX11 homolog, cytochrome c oxidase assembly protein (yeast)23170.1880.6036Yes
43ATP5DATP5D
StanfordSource,  GeneCards
ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit25240.1780.6005Yes
44ATPIF1ATPIF1
StanfordSource,  GeneCards
ATPase inhibitory factor 126360.1730.6035Yes
45UQCRHUQCRH
StanfordSource,  GeneCards
ubiquinol-cytochrome c reductase hinge protein26680.1700.6117Yes
46NDUFS4NDUFS4
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)27750.1660.6146Yes
47COX5BCOX5B
StanfordSource,  GeneCards
cytochrome c oxidase subunit Vb31390.1500.5994No
48NDUFB7NDUFB7
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa32950.1440.5977No
49NDUFB3NDUFB3
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa34040.1410.5990No
50UQCRFS1UQCRFS1
StanfordSource,  GeneCards
ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 134110.1410.6070No
51SLC25A14SLC25A14
StanfordSource,  GeneCards
solute carrier family 25 (mitochondrial carrier, brain), member 1436520.1300.5989No
52NDUFV2NDUFV2
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa37750.1250.5983No
53SLC25A6SLC25A6
StanfordSource,  GeneCards
solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 641680.1120.5788No
54ATP5G3ATP5G3
StanfordSource,  GeneCards
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9) isoform 342320.1100.5812No
55SURF1SURF1
StanfordSource,  GeneCards
surfeit 142760.1080.5848No
56NDUFV1NDUFV1
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa43250.1070.5880No
57AFG3L2AFG3L2
StanfordSource,  GeneCards
AFG3 ATPase family gene 3-like 2 (yeast)43380.1070.5937No
58ATP5G1ATP5G1
StanfordSource,  GeneCards
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 144350.1030.5935No
59ATP5JATP5J
StanfordSource,  GeneCards
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F645190.1010.5940No
60CYCSCYCS
StanfordSource,  GeneCards
cytochrome c, somatic46470.0960.5913No
61ATP5C1ATP5C1
StanfordSource,  GeneCards
ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 150160.0860.5719No
62COX5ACOX5A
StanfordSource,  GeneCards
cytochrome c oxidase subunit Va50290.0860.5762No
63COX15COX15
StanfordSource,  GeneCards
COX15 homolog, cytochrome c oxidase assembly protein (yeast)57850.0630.5296No
64NDUFS2NDUFS2
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)61900.0500.5056No
65NDUFS3NDUFS3
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)63630.0450.4969No
66NDUFA5NDUFA5
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa63740.0450.4989No
67NDUFA9NDUFA9
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa69220.0300.4642No
68SDHDSDHD
StanfordSource,  GeneCards
succinate dehydrogenase complex, subunit D, integral membrane protein73560.0180.4363No
69UQCRC2UQCRC2
StanfordSource,  GeneCards
ubiquinol-cytochrome c reductase core protein II74030.0160.4342No
70TBDN100TBDN100
StanfordSource,  GeneCards
transcriptional coactivator tubedown-10078920.0030.4018No
71NDUFC2NDUFC2
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa8421-0.0130.3673No
72POPDC2POPDC2
StanfordSource,  GeneCards
popeye domain containing 28557-0.0160.3592No
73NDUFS1NDUFS1
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)8811-0.0240.3438No
74UCP1UCP1
StanfordSource,  GeneCards
uncoupling protein 1 (mitochondrial, proton carrier)8824-0.0240.3444No
75ATP5G2ATP5G2
StanfordSource,  GeneCards
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 28920-0.0270.3397No
76ATP5BATP5B
StanfordSource,  GeneCards
ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide9051-0.0310.3329No
77SLC25A4SLC25A4
StanfordSource,  GeneCards
solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 49606-0.0480.2987No
78UCP3UCP3
StanfordSource,  GeneCards
uncoupling protein 3 (mitochondrial, proton carrier)9668-0.0500.2977No
79COX6A2COX6A2
StanfordSource,  GeneCards
cytochrome c oxidase subunit VIa polypeptide 210177-0.0670.2678No
80NDUFB4NDUFB4
StanfordSource,  GeneCards
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa10558-0.0800.2472No
81ZNF183ZNF183
StanfordSource,  GeneCards
zinc finger protein 183 (RING finger, C3HC4 type)10835-0.0900.2342No
82UCP2UCP2
StanfordSource,  GeneCards
uncoupling protein 2 (mitochondrial, proton carrier)12284-0.1470.1463No
83SDHASDHA
StanfordSource,  GeneCards
succinate dehydrogenase complex, subunit A, flavoprotein (Fp)12501-0.1560.1412No
84UQCRC1UQCRC1
StanfordSource,  GeneCards
ubiquinol-cytochrome c reductase core protein I12601-0.1610.1443No
85ATP5A1ATP5A1
StanfordSource,  GeneCards
ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1, cardiac muscle14538-0.3250.0345No
Table: GSEA details [plain text format]



Fig 1: GSEA_Results   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List



Fig 2: Diabetes_collapsed.gct   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: Null Distribution for Electron_Transport_Chain   
Histogram of random enrichment scores (real ES = 0.614574 )