DatasetGender_collapsed.gct
PhenotypeMALE
GeneSetC2.symbols.gmt#KRAS_TOP100_KNOCKDOWN
Enrichment Score (ES)0.3518396
Normalized Enrichment Score (NES)1.326921
Nominal p-value0.09911243
FDR q-value1.0
FWER p-Value0.951
Table: GSEA Results Summary

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERESCORE_ENRICHMENT
1IGFBP7IGFBP7
StanfordSource,  GeneCards
insulin-like growth factor binding protein 72720.3850.0159Yes
2BMP1BMP1
StanfordSource,  GeneCards
bone morphogenetic protein 13560.3650.0427Yes
3C1SC1S
StanfordSource,  GeneCards
complement component 1, s subcomponent4730.3410.0651Yes
4MYL9MYL9
StanfordSource,  GeneCards
myosin, light polypeptide 9, regulatory4790.3400.0949Yes
5NALP1NALP1
StanfordSource,  GeneCards
NACHT, leucine rich repeat and PYD containing 15680.3250.1178Yes
6FLRT2FLRT2
StanfordSource,  GeneCards
fibronectin leucine rich transmembrane protein 26800.3080.1376Yes
7NCF2NCF2
StanfordSource,  GeneCards
neutrophil cytosolic factor 2 (65kDa, chronic granulomatous disease, autosomal 2)11040.2650.1328Yes
8COL4A2COL4A2
StanfordSource,  GeneCards
collagen, type IV, alpha 211090.2640.1559Yes
9CCL2CCL2
StanfordSource,  GeneCards
chemokine (C-C motif) ligand 211400.2610.1770Yes
10ITGAVITGAV
StanfordSource,  GeneCards
integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)11840.2560.1968Yes
11MATN2MATN2
StanfordSource,  GeneCards
matrilin 212730.2490.2130Yes
12ULK1ULK1
StanfordSource,  GeneCards
unc-51-like kinase 1 (C. elegans)14380.2370.2230Yes
13CMKOR1CMKOR1
StanfordSource,  GeneCards
chemokine orphan receptor 114860.2340.2405Yes
14COL5A1COL5A1
StanfordSource,  GeneCards
collagen, type V, alpha 116860.2220.2468Yes
15ACVR1BACVR1B
StanfordSource,  GeneCards
activin A receptor, type IB18810.2100.2525Yes
16BHLHB2BHLHB2
StanfordSource,  GeneCards
basic helix-loop-helix domain containing, class B, 219570.2060.2657Yes
17INPP4BINPP4B
StanfordSource,  GeneCards
inositol polyphosphate-4-phosphatase, type II, 105kDa21480.1960.2704Yes
18KIAA0992KIAA0992
StanfordSource,  GeneCards
palladin22580.1920.2801Yes
19CALD1CALD1
StanfordSource,  GeneCards
caldesmon 122750.1910.2959Yes
20LAMP2LAMP2
StanfordSource,  GeneCards
lysosomal-associated membrane protein 222810.1900.3125Yes
21TIMP3TIMP3
StanfordSource,  GeneCards
tissue inhibitor of metalloproteinase 3 (Sorsby fundus dystrophy, pseudoinflammatory)23520.1870.3243Yes
22PGLSPGLS
StanfordSource,  GeneCards
6-phosphogluconolactonase25260.1780.3285Yes
23ADCY7ADCY7
StanfordSource,  GeneCards
adenylate cyclase 726360.1740.3366Yes
24CDH4CDH4
StanfordSource,  GeneCards
cadherin 4, type 1, R-cadherin (retinal)27300.1700.3455Yes
25SERPINE2SERPINE2
StanfordSource,  GeneCards
serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 233160.1450.3192Yes
26TGFB2TGFB2
StanfordSource,  GeneCards
transforming growth factor, beta 233260.1450.3314Yes
27SGKSGK
StanfordSource,  GeneCards
serum/glucocorticoid regulated kinase33560.1430.3421Yes
28SLC22A5SLC22A5
StanfordSource,  GeneCards
solute carrier family 22 (organic cation transporter), member 533990.1410.3518Yes
29SLC16A4SLC16A4
StanfordSource,  GeneCards
solute carrier family 16 (monocarboxylic acid transporters), member 436750.1310.3450No
30JUNJUN
StanfordSource,  GeneCards
v-jun sarcoma virus 17 oncogene homolog (avian)37770.1270.3495No
31MAP3K8MAP3K8
StanfordSource,  GeneCards
mitogen-activated protein kinase kinase kinase 845390.1000.3075No
32LBHLBH
StanfordSource,  GeneCards
likely ortholog of mouse limb-bud and heart gene46790.0960.3067No
33ECE1ECE1
StanfordSource,  GeneCards
endothelin converting enzyme 147310.0940.3116No
34CHST3CHST3
StanfordSource,  GeneCards
carbohydrate (chondroitin 6) sulfotransferase 348620.0900.3109No
35TNSTNS
StanfordSource,  GeneCards
tensin51140.0820.3014No
36TMEPAITMEPAI
StanfordSource,  GeneCards
transmembrane, prostate androgen induced RNA51490.0810.3063No
37SERPINE1SERPINE1
StanfordSource,  GeneCards
serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 152300.0790.3079No
38DKFZp434P162DKFZp434P162
StanfordSource,  GeneCards
hypothetical protein DKFZp434P16255760.0670.2908No
39DICER1DICER1
StanfordSource,  GeneCards
Dicer1, Dcr-1 homolog (Drosophila)55950.0660.2955No
40HSPB1HSPB1
StanfordSource,  GeneCards
heat shock 27kDa protein 157190.0620.2928No
41WISP2WISP2
StanfordSource,  GeneCards
WNT1 inducible signaling pathway protein 259230.0570.2843No
42P4HA2P4HA2
StanfordSource,  GeneCards
procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide II59980.0550.2842No
43CGI-116CGI-116
StanfordSource,  GeneCards
CGI-116 protein62680.0470.2704No
44TAGLNTAGLN
StanfordSource,  GeneCards
transgelin63940.0440.2660No
45TUFT1TUFT1
StanfordSource,  GeneCards
tuftelin 164120.0430.2687No
46PLEKHC1PLEKHC1
StanfordSource,  GeneCards
pleckstrin homology domain containing, family C (with FERM domain) member 164350.0430.2710No
47TPM1TPM1
StanfordSource,  GeneCards
tropomyosin 1 (alpha)68220.0310.2480No
48EVLEVL
StanfordSource,  GeneCards
Enah/Vasp-like69060.0290.2449No
49IGSF4IGSF4
StanfordSource,  GeneCards
immunoglobulin superfamily, member 469570.0270.2440No
50DFNA5DFNA5
StanfordSource,  GeneCards
deafness, autosomal dominant 569690.0270.2457No
51ARK5ARK5
StanfordSource,  GeneCards
KIAA0537 gene product72600.0180.2280No
52HGDHGD
StanfordSource,  GeneCards
homogentisate 1,2-dioxygenase (homogentisate oxidase)73140.0160.2259No
53DKK3DKK3
StanfordSource,  GeneCards
dickkopf homolog 3 (Xenopus laevis)75540.0100.2108No
54ST5ST5
StanfordSource,  GeneCards
suppression of tumorigenicity 575550.0100.2116No
55SNAI1SNAI1
StanfordSource,  GeneCards
snail homolog 1 (Drosophila)77310.0040.2002No
56ADAM19ADAM19
StanfordSource,  GeneCards
a disintegrin and metalloproteinase domain 19 (meltrin beta)7888-0.0010.1899No
57GADD45BGADD45B
StanfordSource,  GeneCards
growth arrest and DNA-damage-inducible, beta8133-0.0070.1743No
58JUNBJUNB
StanfordSource,  GeneCards
jun B proto-oncogene8165-0.0080.1729No
59ATP2B4ATP2B4
StanfordSource,  GeneCards
ATPase, Ca++ transporting, plasma membrane 48206-0.0090.1711No
60JAK1JAK1
StanfordSource,  GeneCards
Janus kinase 1 (a protein tyrosine kinase)9031-0.0320.1189No
61MGEA5MGEA5
StanfordSource,  GeneCards
meningioma expressed antigen 5 (hyaluronidase)9308-0.0390.1039No
62PDXKPDXK
StanfordSource,  GeneCards
pyridoxal (pyridoxine, vitamin B6) kinase9527-0.0470.0935No
63COL4A1COL4A1
StanfordSource,  GeneCards
collagen, type IV, alpha 19899-0.0580.0738No
64TGFBITGFBI
StanfordSource,  GeneCards
transforming growth factor, beta-induced, 68kDa9990-0.0600.0731No
65GPR56GPR56
StanfordSource,  GeneCards
G protein-coupled receptor 5610144-0.0650.0687No
66COL7A1COL7A1
StanfordSource,  GeneCards
collagen, type VII, alpha 1 (epidermolysis bullosa, dystrophic, dominant and recessive)10206-0.0670.0705No
67MUC3BMUC3B
StanfordSource,  GeneCards
mucin 3B10290-0.0700.0711No
68RSU1RSU1
StanfordSource,  GeneCards
Ras suppressor protein 110460-0.0760.0665No
69GABARAPL1GABARAPL1
StanfordSource,  GeneCards
GABA(A) receptor-associated protein like 110563-0.0790.0667No
70EPHB2EPHB2
StanfordSource,  GeneCards
EphB210656-0.0820.0678No
71HSPG2HSPG2
StanfordSource,  GeneCards
heparan sulfate proteoglycan 2 (perlecan)10959-0.0920.0557No
72CLDN4CLDN4
StanfordSource,  GeneCards
claudin 411749-0.1200.0136No
73MSCMSC
StanfordSource,  GeneCards
musculin (activated B-cell factor-1)11912-0.1260.0139No
74SOX4SOX4
StanfordSource,  GeneCards
SRY (sex determining region Y)-box 411926-0.1270.0243No
75NCK2NCK2
StanfordSource,  GeneCards
NCK adaptor protein 212092-0.1330.0250No
76WASPIPWASPIP
StanfordSource,  GeneCards
Wiskott-Aldrich syndrome protein interacting protein12214-0.1380.0291No
77SPARCSPARC
StanfordSource,  GeneCards
secreted protein, acidic, cysteine-rich (osteonectin)12626-0.1550.0154No
78DNAJB2DNAJB2
StanfordSource,  GeneCards
DnaJ (Hsp40) homolog, subfamily B, member 212698-0.1580.0246No
79SPOCKSPOCK
StanfordSource,  GeneCards
sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican)12829-0.1640.0304No
80IGFBP3IGFBP3
StanfordSource,  GeneCards
insulin-like growth factor binding protein 313917-0.230-0.0218No
81C8orf4C8orf4
StanfordSource,  GeneCards
chromosome 8 open reading frame 414063-0.241-0.0102No
82GLIPR1GLIPR1
StanfordSource,  GeneCards
GLI pathogenesis-related 1 (glioma)14256-0.258-0.0001No
83COL1A1COL1A1
StanfordSource,  GeneCards
collagen, type I, alpha 114489-0.2860.0097No
84NPTX1NPTX1
StanfordSource,  GeneCards
neuronal pentraxin I14667-0.3170.0259No
Table: GSEA details [plain text format]



Fig 1: GSEA_Results   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List



Fig 2: Gender_collapsed.gct   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: Null Distribution for KRAS_TOP100_KNOCKDOWN   
Histogram of random enrichment scores (real ES = 0.3518396 )