DatasetGender_collapsed.gct
PhenotypeFEMALE
GeneSetC2.symbols.gmt#rhoPathway
Enrichment Score (ES)-0.4453963
Normalized Enrichment Score (NES)-1.2943203
Nominal p-value0.17934783
FDR q-value1.0
FWER p-Value0.914
Table: GSEA Results Summary

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERESCORE_ENRICHMENT
1GSNGSN
StanfordSource,  GeneCards
gelsolin (amyloidosis, Finnish type)16460.224-0.0529No
2ARHGEF5ARHGEF5
StanfordSource,  GeneCards
Rho guanine nucleotide exchange factor (GEF) 521940.194-0.0401No
3ARHGEF11ARHGEF11
StanfordSource,  GeneCards
Rho guanine nucleotide exchange factor (GEF) 1128160.166-0.0393No
4BAIAP2BAIAP2
StanfordSource,  GeneCards
BAI1-associated protein 232650.147-0.0320No
5ARPC4ARPC4
StanfordSource,  GeneCards
actin related protein 2/3 complex, subunit 4, 20kDa35390.136-0.0156No
6ROCK1ROCK1
StanfordSource,  GeneCards
Rho-associated, coiled-coil containing protein kinase 166980.035-0.2170No
7LIMK1LIMK1
StanfordSource,  GeneCards
LIM domain kinase 169940.027-0.2299No
8ARHGAP1ARHGAP1
StanfordSource,  GeneCards
Rho GTPase activating protein 170420.025-0.2267No
9OPHN1OPHN1
StanfordSource,  GeneCards
oligophrenin 173630.015-0.2442No
10MYLKMYLK
StanfordSource,  GeneCards
myosin, light polypeptide kinase76070.008-0.2583No
11VCLVCL
StanfordSource,  GeneCards
vinculin76200.007-0.2572No
12PIP5K1BPIP5K1B
StanfordSource,  GeneCards
phosphatidylinositol-4-phosphate 5-kinase, type I, beta7997-0.004-0.2813No
13MYL2MYL2
StanfordSource,  GeneCards
myosin, light polypeptide 2, regulatory, cardiac, slow8062-0.006-0.2841No
14ACTR2ACTR2
StanfordSource,  GeneCards
ARP2 actin-related protein 2 homolog (yeast)8767-0.024-0.3249No
15TLN1TLN1
StanfordSource,  GeneCards
talin 18919-0.029-0.3277No
16ARHGEF1ARHGEF1
StanfordSource,  GeneCards
Rho guanine nucleotide exchange factor (GEF) 19869-0.057-0.3765No
17ARHGAP6ARHGAP6
StanfordSource,  GeneCards
Rho GTPase activating protein 610075-0.063-0.3742No
18ARPC3ARPC3
StanfordSource,  GeneCards
actin related protein 2/3 complex, subunit 3, 21kDa10311-0.070-0.3720No
19ARHGAP5ARHGAP5
StanfordSource,  GeneCards
Rho GTPase activating protein 510432-0.075-0.3611No
20PPP1R12BPPP1R12B
StanfordSource,  GeneCards
protein phosphatase 1, regulatory (inhibitor) subunit 12B10803-0.087-0.3638No
21ARHGAP4ARHGAP4
StanfordSource,  GeneCards
Rho GTPase activating protein 411534-0.112-0.3840No
22ARPC1AARPC1A
StanfordSource,  GeneCards
actin related protein 2/3 complex, subunit 1A, 41kDa11578-0.114-0.3581No
23DIAPH1DIAPH1
StanfordSource,  GeneCards
diaphanous homolog 1 (Drosophila)12891-0.167-0.4031Yes
24ARPC2ARPC2
StanfordSource,  GeneCards
actin related protein 2/3 complex, subunit 2, 34kDa13151-0.179-0.3750Yes
25SRCSRC
StanfordSource,  GeneCards
v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)13457-0.198-0.3452Yes
26ARPC1BARPC1B
StanfordSource,  GeneCards
actin related protein 2/3 complex, subunit 1B, 41kDa13797-0.219-0.3122Yes
27ACTR3ACTR3
StanfordSource,  GeneCards
ARP3 actin-related protein 3 homolog (yeast)14874-0.366-0.2913Yes
28CFL1CFL1
StanfordSource,  GeneCards
cofilin 1 (non-muscle)14884-0.368-0.1987Yes
29PIP5K1APIP5K1A
StanfordSource,  GeneCards
phosphatidylinositol-4-phosphate 5-kinase, type I, alpha14938-0.391-0.1033Yes
30PFN1PFN1
StanfordSource,  GeneCards
profilin 114999-0.4390.0037Yes
Table: GSEA details [plain text format]



Fig 1: GSEA_Results   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List



Fig 2: Gender_collapsed.gct   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: Null Distribution for rhoPathway   
Histogram of random enrichment scores (real ES = -0.4453963 )