Human Gene Set: GSE38696_LIGHT_ZONE_VS_DARK_ZONE_BCELL_DN


Standard name GSE38696_LIGHT_ZONE_VS_DARK_ZONE_BCELL_DN
Systematic name M9006
Brief description Genes down-regulated in B lymphocytes: light zone versus dark zone.
Full description or abstract Microarrays of gene expression in mouse germinal center light zone and dark zone B cells sorted according to the expression of cell surface molecules CD83 and CXCR4 We used microarray data to identify genes differentially expressed by B cells in the light and dark zones of germinal centers from mouse skin-draining lymph nodes 12 days after subcutaneous immunization with NP-OVA in alum.
Collection C7: Immunologic Signature
      IMMUNESIGDB: ImmuneSigDB
Source publication Pubmed 22740445   Authors: Victora GD,Dominguez-Sola D,Holmes AB,Deroubaix S,Dalla-Favera R,Nussenzweig MC
Exact source GSE38696_3171_200_DN
Related gene sets (show 3 additional gene sets from the source publication)

(show 71 gene sets from any of these authors)
External links
Filtered by similarity ?
Source species Mus musculus
Contributed by Jernej Godec (Dana-Farber Cancer Institute)
Source platform or
identifier namespace		 HUMAN_GENE_SYMBOL
Dataset references (show 1 datasets)
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)

Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Further investigate these 139 genes
Gene families ? Categorize these 139 genes by gene family
Show members (show 200 source identifiers mapped to 139 genes)
Version history 7.3: Moved to ImmuneSigDB sub-collection.

See MSigDB license terms here. Please note that certain gene sets have special access terms.