Gene Set: HOXA9_DN.V1_DN

Standard name HOXA9_DN.V1_DN
Systematic name M2848
Brief description Genes down-regulated in MOLM-14 cells (AML) with knockdown of HOXA9 [GeneID=3205] gene by RNAi vs controls.
Full description or abstract RNA was purified from t(9;11) MOLM-14 AML cells 44h after transduction in triplicates with 2 of the two most effective HOXA9shRNA constructs (3 x 1F3-HOXA9shRNA; 3 x 2A5-HOXA9shRNA) or GFP-controlshRNA (6x).
Collection C6: oncogenic signature gene sets
Source publication Pubmed 19056693   Authors: Faber J,Krivtsov AV,Stubbs MC,Wright R,Davis TN,van den Heuvel-Eibrink M,Zwaan CM,Kung AL,Armstrong SA
Exact source HOXA9sh vs GFPshl; top 200 genes (diff-means)
Related gene sets (show 1 additional gene sets from the source publication)

(show 6 gene sets from the same authors)
External links  
Filtered by similarity
Organism Homo sapiens
Contributed by Pablo Tamayo (Broad Institute)
Source platform HUMAN_GENE_SYMBOL
Dataset references (show 1 datasets)
Download gene set format: grp | text | gmt | gmx | xml
Compute overlaps (show collections to investigate for overlap with this gene set)
Compendia expression profiles GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Further investigate these 190 genes
Gene families Categorize these 190 genes by gene family
Show members (show 200 members mapped to 190 genes)
Version history  

See MSigDB license terms here. Please note that certain gene sets have special access terms.