Browse Gene Sets

Gene set name:

By first letter:

1 2 3 4 5 6 7 8 9 0 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

By collection:

[about the MSigDB collections]

• H (hallmark gene sets, 50 gene sets)
• C1 (positional gene sets, 278 gene sets)
  • by chromosome: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT
• C2 (curated gene sets, 6290 gene sets)
  • CGP (chemical and genetic perturbations, 3368 gene sets)
  • CP (canonical pathways, 2922 gene sets)
    • CP:BIOCARTA (BioCarta gene sets, 292 gene sets)
    • CP:KEGG (KEGG gene sets, 186 gene sets)
    • CP:PID (PID gene sets, 196 gene sets)
    • CP:REACTOME (Reactome gene sets, 1604 gene sets)
    • CP:WIKIPATHWAYS (WikiPathways gene sets, 615 gene sets)
• C3 (regulatory target gene sets, 3731 gene sets)
  • MIR (microRNA targets, 2598 gene sets)
    • MIR:MIR_Legacy (legacy microRNA targets, 221 gene sets)
    • MIR:MIRDB (MIRDB microRNA targets, 2377 gene sets)
  • TFT (all transcription factor targets, 1133 gene sets)
    • TFT:GTRD (GTRD transcription factor targets, 523 gene sets)
    • TFT:TFT_Legacy (legacy transcription factor targets, 610 gene sets)
• C4 (computational gene sets, 858 gene sets)
  • CGN (cancer gene neighborhoods, 427 gene sets)
  • CM (cancer modules, 431 gene sets)
• C5 (ontology gene sets, 14998 gene sets)
  • GO (Gene Ontology, 10185 gene sets)
    • GO:BP (GO biological process, 7481 gene sets)
    • GO:CC (GO cellular component, 996 gene sets)
    • GO:MF (GO molecular function, 1708 gene sets)
  • HPO (Human Phenotye Ontology, 4813 gene sets)
• C6 (oncogenic signature gene sets, 189 gene sets)
• C7 (immunologic signature gene sets, 5219 gene sets)
  • IMMUNESIGDB (ImmuneSigDB gene sets, 4872 gene sets)
  • VAX (vaccine response gene sets, 347 gene sets)
• C8 (cell type signature gene sets, 671 gene sets)