Browse Gene Sets

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By collection:

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  • H (hallmark gene sets, 50 gene sets)
  • C1 (positional gene sets, 278 gene sets)
  • C2 (curated gene sets, 6290 gene sets)
    • CGP (chemical and genetic perturbations, 3368 gene sets)
    • CP (canonical pathways, 2922 gene sets)
  • C3 (regulatory target gene sets, 3731 gene sets)
    • MIR (microRNA targets, 2598 gene sets)
    • TFT (all transcription factor targets, 1133 gene sets)
      • TFT:GTRD (GTRD transcription factor targets, 523 gene sets)
      • TFT:TFT_Legacy (legacy transcription factor targets, 610 gene sets)
  • C4 (computational gene sets, 858 gene sets)
    • CGN (cancer gene neighborhoods, 427 gene sets)
    • CM (cancer modules, 431 gene sets)
  • C5 (ontology gene sets, 14998 gene sets)
    • GO (Gene Ontology, 10185 gene sets)
      • GO:BP (GO biological process, 7481 gene sets)
      • GO:CC (GO cellular component, 996 gene sets)
      • GO:MF (GO molecular function, 1708 gene sets)
    • HPO (Human Phenotye Ontology, 4813 gene sets)
  • C6 (oncogenic signature gene sets, 189 gene sets)
  • C7 (immunologic signature gene sets, 5219 gene sets)
    • IMMUNESIGDB (ImmuneSigDB gene sets, 4872 gene sets)
    • VAX (vaccine response gene sets, 347 gene sets)
  • C8 (cell type signature gene sets, 671 gene sets)

Gene sets starting with N

Click on a gene set name to view its gene set page.

NAB2_TARGET_GENES
NABA_BASEMENT_MEMBRANES
NABA_COLLAGENS
NABA_CORE_MATRISOME
NABA_ECM_AFFILIATED
NABA_ECM_GLYCOPROTEINS
NABA_ECM_REGULATORS
NABA_MATRISOME
NABA_MATRISOME_ASSOCIATED
NABA_PROTEOGLYCANS
NABA_SECRETED_FACTORS
NADELLA_PRKAR1A_TARGETS_DN
NADELLA_PRKAR1A_TARGETS_UP
NADERI_BREAST_CANCER_PROGNOSIS_DN
NADERI_BREAST_CANCER_PROGNOSIS_UP
NADLER_HYPERGLYCEMIA_AT_OBESITY
NADLER_OBESITY_DN
NADLER_OBESITY_UP
NAGASHIMA_EGF_SIGNALING_UP
NAGASHIMA_NRG1_SIGNALING_DN
NAGASHIMA_NRG1_SIGNALING_UP
NAGY_PCAF_COMPONENTS_HUMAN
NAGY_STAGA_COMPONENTS_HUMAN
NAGY_TFTC_COMPONENTS_HUMAN
NAISHIRO_CTNNB1_TARGETS_WITH_LEF1_M
OTIF

NAKAJIMA_EOSINOPHIL
NAKAJIMA_MAST_CELL
NAKAMURA_ADIPOGENESIS_EARLY_DN
NAKAMURA_ADIPOGENESIS_EARLY_UP
NAKAMURA_ADIPOGENESIS_LATE_DN
NAKAMURA_ADIPOGENESIS_LATE_UP
NAKAMURA_ALVEOLAR_EPITHELIUM
NAKAMURA_BRONCHIAL_AND_BRONCHIOLAR_
EPITHELIA

NAKAMURA_CANCER_MICROENVIRONMENT_DN
NAKAMURA_CANCER_MICROENVIRONMENT_UP
NAKAMURA_LUNG_CANCER
NAKAMURA_LUNG_CANCER_DIFFERENTIATIO
N_MARKERS

NAKAMURA_METASTASIS
NAKAMURA_METASTASIS_MODEL_DN
NAKAMURA_METASTASIS_MODEL_UP
NAKAMURA_TUMOR_ZONE_PERIPHERAL_VS_C
ENTRAL_DN

NAKAMURA_TUMOR_ZONE_PERIPHERAL_VS_C
ENTRAL_UP

NAKAYA_B_CELL_FLUARIX_FLUVIRIN_AGE_
18_50YO_7DY_DN

NAKAYA_B_CELL_FLUARIX_FLUVIRIN_AGE_
18_50YO_7DY_UP

NAKAYA_B_CELL_FLUMIST_AGE_18_50YO_7
DY_DN

NAKAYA_B_CELL_FLUMIST_AGE_18_50YO_7
DY_UP

NAKAYA_MONOCYTE_FLUARIX_FLUVIRIN_AG
E_18_50YO_7DY_DN

NAKAYA_MONOCYTE_FLUARIX_FLUVIRIN_AG
E_18_50YO_7DY_UP

NAKAYA_MONOCYTE_FLUMIST_AGE_18_50YO
_7DY_DN

NAKAYA_MONOCYTE_FLUMIST_AGE_18_50YO
_7DY_UP

NAKAYA_MYELOID_DENDRITIC_CELL_FLUAR
IX_FLUVIRIN_AGE_18_50YO_7DY_DN

NAKAYA_MYELOID_DENDRITIC_CELL_FLUAR
IX_FLUVIRIN_AGE_18_50YO_7DY_UP

NAKAYA_MYELOID_DENDRITIC_CELL_FLUMI
ST_AGE_18_50YO_7DY_DN

NAKAYA_MYELOID_DENDRITIC_CELL_FLUMI
ST_AGE_18_50YO_7DY_UP

NAKAYA_PBMC_FLUAD_IMUVAC_MALE_AGE_1
4_27YO_CORRELATED_WITH_HAI_RESPONSE
_MF59_ADJUVANTED_AND_NON_1DY_GENES_
IN_BTM_M75_POSITIVE

NAKAYA_PBMC_FLUAD_MALE_AGE_14_27YO_
1D_POSTBOOST_VS_0D_PREIMM_MF59_ADJU
VANTED_1DY_ATIV_UP

NAKAYA_PBMC_FLUAD_MALE_AGE_14_27YO_
1D_POSTBOOST_VS_0D_PREIMM_MF59_ADJU
VANTED_1DY_GENES_IN_BTM_M40_AND_M53
_DN

NAKAYA_PBMC_FLUAD_MALE_AGE_14_27YO_
1D_POSTBOOST_VS_0D_PREIMM_MF59_ADJU
VANTED_1DY_GENES_IN_BTM_M40_AND_M53
_UP

NAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18
_50YO_3DY_DN

NAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18
_50YO_3DY_UP

NAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18
_50YO_7DY_DN

NAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18
_50YO_7DY_UP

NAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18
_50YO_CORRELATED_WITH_HAI_28DY_RESP
ONSE_AT_3DY_NEGATIVE

NAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18
_50YO_CORRELATED_WITH_HAI_28DY_RESP
ONSE_AT_3DY_POSITIVE

NAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18
_50YO_CORRELATED_WITH_HAI_28DY_RESP
ONSE_AT_7DY_NEGATIVE

NAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18
_50YO_CORRELATED_WITH_HAI_28DY_RESP
ONSE_AT_7DY_POSITIVE

NAKAYA_PBMC_FLUMIST_AGE_18_50YO_3DY
_DN

NAKAYA_PBMC_FLUMIST_AGE_18_50YO_3DY
_IFN_SUBSET_UP

NAKAYA_PBMC_FLUMIST_AGE_18_50YO_3DY
_UP

NAKAYA_PBMC_FLUMIST_AGE_18_50YO_7DY
_DN

NAKAYA_PBMC_FLUMIST_AGE_18_50YO_7DY
_IFN_SUBSET_DN

NAKAYA_PBMC_FLUMIST_AGE_18_50YO_7DY
_IFN_SUBSET_UP

NAKAYA_PBMC_FLUMIST_AGE_18_50YO_7DY
_UP

NAKAYA_PBMC_IMUVAC_MALE_AGE_14_27YO
_1D_POSTBOOST_VS_0DY_PREIMM_TIV_UP

NAKAYA_PLASMACYTOID_DENDRITIC_CELL_
FLUARIX_FLUVIRIN_AGE_18_50YO_7DY_DN

NAKAYA_PLASMACYTOID_DENDRITIC_CELL_
FLUARIX_FLUVIRIN_AGE_18_50YO_7DY_UP

NAKAYA_PLASMACYTOID_DENDRITIC_CELL_
FLUMIST_AGE_18_50YO_7DY_DN

NAKAYA_PLASMACYTOID_DENDRITIC_CELL_
FLUMIST_AGE_18_50YO_7DY_UP

NAKAYAMA_FRA2_TARGETS
NAKAYAMA_SOFT_TISSUE_TUMORS_PCA1_DN
NAKAYAMA_SOFT_TISSUE_TUMORS_PCA1_UP
NAKAYAMA_SOFT_TISSUE_TUMORS_PCA2_DN
NAKAYAMA_SOFT_TISSUE_TUMORS_PCA2_UP
NAM_FXYD5_TARGETS_DN
NATSUME_RESPONSE_TO_INTERFERON_BETA
_DN

NATSUME_RESPONSE_TO_INTERFERON_BETA
_UP

NCOA2_TARGET_GENES
NCOA4_TARGET_GENES
NCOA6_TARGET_GENES
NCX_01
NEBEN_AML_WITH_FLT3_OR_NRAS_DN
NEBEN_AML_WITH_FLT3_OR_NRAS_UP
NEGATIVE_REGULATION_OF_ANGIOGENESIS
NEGATIVE_REGULATION_OF_CELL_MIGRATI
ON

NEGATIVE_REGULATION_OF_CELLULAR_BIO
SYNTHETIC_PROCESS

NEGATIVE_REGULATION_OF_CELLULAR_PRO
TEIN_METABOLIC_PROCESS

NEGATIVE_REGULATION_OF_PHOSPHATE_ME
TABOLIC_PROCESS

NEGATIVE_REGULATION_OF_TRANSLATION
NELSON_RESPONSE_TO_ANDROGEN_DN
NELSON_RESPONSE_TO_ANDROGEN_UP
NEMETH_INFLAMMATORY_RESPONSE_LPS_DN
NEMETH_INFLAMMATORY_RESPONSE_LPS_UP
NERF_Q2
NERVOUS_SYSTEM_DEVELOPMENT
NEURITE_DEVELOPMENT
NEUROD2_TARGET_GENES
NEUROG3_TARGET_GENES
NEWMAN_ERCC6_TARGETS_DN
NEWMAN_ERCC6_TARGETS_UP
NF1_Q6
NF1_Q6_01
NFAT_Q4_01
NFAT_Q6
NFE2_01
NFE2L1_TARGET_GENES
NFE2L2.V2
NFE2L3_TARGET_GENES
NFKAPPAB65_01
NFKAPPAB_01
NFKB_C
NFKB_Q6
NFKB_Q6_01
NFKBIA_TARGET_GENES
NFMUE1_Q6
NFRKB_TARGET_GENES
NFXL1_TARGET_GENES
NFY_01
NFY_C
NFY_Q6
NFY_Q6_01
NGFIC_01
NGO_MALIGNANT_GLIOMA_1P_LOH
NGUYEN_NOTCH1_TARGETS_DN
NGUYEN_NOTCH1_TARGETS_UP
NICK_RESPONSE_TO_PROC_TREATMENT_DN
NICK_RESPONSE_TO_PROC_TREATMENT_UP
NIELSEN_LEIOMYOSARCOMA_CNN1_UP
NIELSEN_SYNOVIAL_SARCOMA_DN
NIKOLSKY_BREAST_CANCER_10Q22_AMPLIC
ON

NIKOLSKY_BREAST_CANCER_11Q12_Q14_AM
PLICON

NIKOLSKY_BREAST_CANCER_12Q13_Q21_AM
PLICON

NIKOLSKY_BREAST_CANCER_12Q24_AMPLIC
ON

NIKOLSKY_BREAST_CANCER_14Q22_AMPLIC
ON

NIKOLSKY_BREAST_CANCER_15Q26_AMPLIC
ON

NIKOLSKY_BREAST_CANCER_16P13_AMPLIC
ON

NIKOLSKY_BREAST_CANCER_16Q24_AMPLIC
ON

NIKOLSKY_BREAST_CANCER_17P11_AMPLIC
ON

NIKOLSKY_BREAST_CANCER_17Q11_Q21_AM
PLICON

NIKOLSKY_BREAST_CANCER_17Q21_Q25_AM
PLICON

NIKOLSKY_BREAST_CANCER_19P13_AMPLIC
ON

NIKOLSKY_BREAST_CANCER_19Q13.1_AMPL
ICON

NIKOLSKY_BREAST_CANCER_19Q13.4_AMPL
ICON

NIKOLSKY_BREAST_CANCER_1Q21_AMPLICO
N

NIKOLSKY_BREAST_CANCER_1Q32_AMPLICO
N

NIKOLSKY_BREAST_CANCER_20P13_AMPLIC
ON

NIKOLSKY_BREAST_CANCER_20Q11_AMPLIC
ON

NIKOLSKY_BREAST_CANCER_20Q12_Q13_AM
PLICON

NIKOLSKY_BREAST_CANCER_21Q22_AMPLIC
ON

NIKOLSKY_BREAST_CANCER_22Q13_AMPLIC
ON

NIKOLSKY_BREAST_CANCER_5P15_AMPLICO
N

NIKOLSKY_BREAST_CANCER_6P24_P22_AMP
LICON

NIKOLSKY_BREAST_CANCER_7P15_AMPLICO
N

NIKOLSKY_BREAST_CANCER_7P22_AMPLICO
N

NIKOLSKY_BREAST_CANCER_7Q21_Q22_AMP
LICON

NIKOLSKY_BREAST_CANCER_8P12_P11_AMP
LICON

NIKOLSKY_BREAST_CANCER_8Q12_Q22_AMP
LICON

NIKOLSKY_BREAST_CANCER_8Q23_Q24_AMP
LICON

NIKOLSKY_MUTATED_AND_AMPLIFIED_IN_B
REAST_CANCER

NIKOLSKY_OVERCONNECTED_IN_BREAST_CA
NCER

NING_CHRONIC_OBSTRUCTIVE_PULMONARY_
DISEASE_DN

NING_CHRONIC_OBSTRUCTIVE_PULMONARY_
DISEASE_UP

NITROGEN_COMPOUND_BIOSYNTHETIC_PROC
ESS

NITROGEN_COMPOUND_METABOLIC_PROCESS
NKX22_01
NKX25_01
NKX25_02
NKX2_2_TARGET_GENES
NKX2_3_TARGET_GENES
NKX2_5_TARGET_GENES
NKX2_8_TARGET_GENES
NKX3A_01
NKX61_01
NKX62_Q2
NKX6_1_TARGET_GENES
NME2_TARGET_GENES
NMYC_01
NOJIMA_SFRP2_TARGETS_DN
NOJIMA_SFRP2_TARGETS_UP
NON_MEMBRANE_BOUND_ORGANELLE
NOTCH3_TARGET_GENES
NOTCH_DN.V1_DN
NOTCH_DN.V1_UP
NOUSHMEHR_GBM_GERMLINE_MUTATED
NOUSHMEHR_GBM_SILENCED_BY_METHYLATI
ON

NOUSHMEHR_GBM_SOMATIC_MUTATED
NOUZOVA_METHYLATED_IN_APL
NOUZOVA_TRETINOIN_AND_H4_ACETYLATIO
N

NPAT_TARGET_GENES
NPM1_TARGET_GENES
NR0B1_TARGET_GENES
NR1D1_TARGET_GENES
NR1H4_TARGET_GENES
NR1I2_TARGET_GENES
NR2E3_TARGET_GENES
NR4A2_TARGET_GENES
NR5A1_TARGET_GENES
NRF1_Q6
NRF2_01
NRF2_Q4
NRL_DN.V1_DN
NRL_DN.V1_UP
NRSF_01
NUCLEAR_CHROMATIN
NUCLEAR_CHROMOSOME_PART
NUCLEAR_DNA_DIRECTED_RNA_POLYMERASE
_COMPLEX

NUCLEOLAR_PART
NUFIP1_TARGET_GENES
NUMATA_CSF3_SIGNALING_VIA_STAT3
NUNODA_RESPONSE_TO_DASATINIB_IMATIN
IB_DN

NUNODA_RESPONSE_TO_DASATINIB_IMATIN
IB_UP

NUP153_TARGET_GENES
NUP214_TARGET_GENES
NUTT_GBM_VS_AO_GLIOMA_DN
NUTT_GBM_VS_AO_GLIOMA_UP
NUYTTEN_EZH2_TARGETS_DN
NUYTTEN_EZH2_TARGETS_UP
NUYTTEN_NIPP1_TARGETS_DN
NUYTTEN_NIPP1_TARGETS_UP