Browse Gene Sets

Gene set name:

 
  (Enter full or partial name)

By first letter:

 

1 2 3 4 5 6 7 8 9 0 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

By collection:

[about the MSigDB collections]

  • H (hallmark gene sets, 50 gene sets)
  • C1 (positional gene sets, 278 gene sets)
  • C2 (curated gene sets, 6290 gene sets)
    • CGP (chemical and genetic perturbations, 3368 gene sets)
    • CP (canonical pathways, 2922 gene sets)
  • C3 (regulatory target gene sets, 3731 gene sets)
    • MIR (microRNA targets, 2598 gene sets)
    • TFT (all transcription factor targets, 1133 gene sets)
      • TFT:GTRD (GTRD transcription factor targets, 523 gene sets)
      • TFT:TFT_Legacy (legacy transcription factor targets, 610 gene sets)
  • C4 (computational gene sets, 858 gene sets)
    • CGN (cancer gene neighborhoods, 427 gene sets)
    • CM (cancer modules, 431 gene sets)
  • C5 (ontology gene sets, 14998 gene sets)
    • GO (Gene Ontology, 10185 gene sets)
      • GO:BP (GO biological process, 7481 gene sets)
      • GO:CC (GO cellular component, 996 gene sets)
      • GO:MF (GO molecular function, 1708 gene sets)
    • HPO (Human Phenotye Ontology, 4813 gene sets)
  • C6 (oncogenic signature gene sets, 189 gene sets)
  • C7 (immunologic signature gene sets, 5219 gene sets)
    • IMMUNESIGDB (ImmuneSigDB gene sets, 4872 gene sets)
    • VAX (vaccine response gene sets, 347 gene sets)
  • C8 (cell type signature gene sets, 671 gene sets)

Gene sets starting with T

Click on a gene set name to view its gene set page.

T3R_Q6
TAANNYSGCG_UNKNOWN
TAATAAT_MIR126
TAATGTG_MIR323
TAATTA_CHX10_01
TAAWWATAG_RSRFC4_Q2
TAAYNRNNTCC_UNKNOWN
TACAATC_MIR508
TACGGGT_MIR99A_MIR100_MIR99B
TACTTGA_MIR26A_MIR26B
TAF9B_TARGET_GENES
TAGAACC_MIR182
TAGCTTT_MIR9
TAGGTCA_MIR192_MIR215
TAGHAVI_NEOPLASTIC_TRANSFORMATION
TAKADA_GASTRIC_CANCER_COPY_NUMBER_D
N

TAKADA_GASTRIC_CANCER_COPY_NUMBER_U
P

TAKAO_RESPONSE_TO_UVB_RADIATION_DN
TAKAO_RESPONSE_TO_UVB_RADIATION_UP
TAKAYAMA_BOUND_BY_AR
TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSIO
N_10D_DN

TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSIO
N_10D_UP

TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSIO
N_16D_DN

TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSIO
N_16D_UP

TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSIO
N_3D_DN

TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSIO
N_3D_UP

TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSIO
N_6HR_DN

TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSIO
N_6HR_UP

TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSIO
N_8D_DN

TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSIO
N_8D_UP

TAL1ALPHAE47_01
TAL1BETAE47_01
TAL1BETAITF2_01
TANAKA_METHYLATED_IN_ESOPHAGEAL_CAR
CINOMA

TANG_SENESCENCE_TP53_TARGETS_DN
TANG_SENESCENCE_TP53_TARGETS_UP
TARTE_PLASMA_CELL_VS_B_LYMPHOCYTE_D
N

TARTE_PLASMA_CELL_VS_B_LYMPHOCYTE_U
P

TARTE_PLASMA_CELL_VS_PLASMABLAST_DN
TARTE_PLASMA_CELL_VS_PLASMABLAST_UP
TASOR_TARGET_GENES
TATA_01
TATA_C
TATAAA_TATA_01
TATCTGG_MIR488
TATTATA_MIR374
TAVAZOIE_METASTASIS
TAVOR_CEBPA_TARGETS_DN
TAVOR_CEBPA_TARGETS_UP
TAXCREB_01
TAXCREB_02
TAYLOR_METHYLATED_IN_ACUTE_LYMPHOBL
ASTIC_LEUKEMIA

TAZ_TARGET_GENES
TBK1.DF_DN
TBK1.DF_UP
TBK1.DN.48HRS_DN
TBK1.DN.48HRS_UP
TBP_01
TBPL1_TARGET_GENES
TBX1_TARGET_GENES
TBX3_TARGET_GENES
TCANNTGAY_SREBP1_01
TCATCTC_MIR143
TCCAGAG_MIR518C
TCCAGAT_MIR5165P
TCCATTKW_UNKNOWN
TCCCCAC_MIR491
TCCCRNNRTGC_UNKNOWN
TCCGTCC_MIR184
TCF11_01
TCF11MAFG_01
TCF1P_Q6
TCF4_Q5
TCF7_TARGET_GENES
TCGA_GLIOBLASTOMA_COPY_NUMBER_DN
TCGA_GLIOBLASTOMA_COPY_NUMBER_UP
TCGA_GLIOBLASTOMA_MUTATED
TCGATGG_MIR213
TCOF1_TARGET_GENES
TCTAGAG_MIR517
TCTATGA_MIR376A_MIR376B
TCTCTCC_MIR185
TCTGATA_MIR361
TCTGATC_MIR383
TCTGGAC_MIR198
TDRD3_TARGET_GENES
TEAD2_TARGET_GENES
TEF1_Q6
TEF_Q6
TEL2_Q6
TENEDINI_MEGAKARYOCYTE_MARKERS
TERAMOTO_OPN_TARGETS_CLUSTER_1
TERAMOTO_OPN_TARGETS_CLUSTER_3
TERAMOTO_OPN_TARGETS_CLUSTER_4
TERAMOTO_OPN_TARGETS_CLUSTER_5
TERAMOTO_OPN_TARGETS_CLUSTER_6
TERAMOTO_OPN_TARGETS_CLUSTER_7
TERAMOTO_OPN_TARGETS_CLUSTER_8
TERAO_AOX4_TARGETS_HG_DN
TERAO_AOX4_TARGETS_HG_UP
TERAO_AOX4_TARGETS_SKIN_DN
TERAO_AOX4_TARGETS_SKIN_UP
TERF1_TARGET_GENES
TERF2_TARGET_GENES
TERT_TARGET_GENES
TESAR_ALK_AND_JAK_TARGETS_MOUSE_ES_
D4_DN

TESAR_ALK_AND_JAK_TARGETS_MOUSE_ES_
D4_UP

TESAR_ALK_TARGETS_EPISC_3D_UP
TESAR_ALK_TARGETS_EPISC_4D_UP
TESAR_ALK_TARGETS_HUMAN_ES_4D_DN
TESAR_ALK_TARGETS_HUMAN_ES_5D_DN
TESAR_ALK_TARGETS_HUMAN_ES_5D_UP
TESAR_JAK_TARGETS_MOUSE_ES_D3_DN
TESAR_JAK_TARGETS_MOUSE_ES_D3_UP
TET1_TARGET_GENES
TFAM_TARGET_GENES
TFCP2_TARGET_GENES
TFDP2_TARGET_GENES
TFEB_TARGET_GENES
TFIIA_Q6
TFIII_Q6
TGAATGT_MIR181A_MIR181B_MIR181C_MIR
181D

TGACAGNY_MEIS1_01
TGACATY_UNKNOWN
TGACCTTG_SF1_Q6
TGACCTY_ERR1_Q2
TGACGTCA_ATF3_Q6
TGAGATT_MIR216
TGANNYRGCA_TCF11MAFG_01
TGANTCA_AP1_C
TGASTMAGC_NFE2_01
TGATTTRY_GFI1_01
TGAYRTCA_ATF3_Q6
TGCAAAC_MIR452
TGCACGA_MIR517A_MIR517C
TGCACTG_MIR148A_MIR152_MIR148B
TGCACTT_MIR519C_MIR519B_MIR519A
TGCCAAR_NF1_Q6
TGCCTTA_MIR124A
TGCGCANK_UNKNOWN
TGCTGAY_UNKNOWN
TGCTGCT_MIR15A_MIR16_MIR15B_MIR195_
MIR424_MIR497

TGCTTTG_MIR330
TGFB_UP.V1_DN
TGFB_UP.V1_UP
TGGAAA_NFAT_Q4_01
TGGNNNNNNKCCAR_UNKNOWN
TGGTGCT_MIR29A_MIR29B_MIR29C
TGIF_01
TGTATGA_MIR4853P
TGTGTGA_MIR377
TGTTTAC_MIR30A5P_MIR30C_MIR30D_MIR3
0B_MIR30E5P

TGTTTGY_HNF3_Q6
TGTYNNNNNRGCARM_UNKNOWN
THAKAR_PBMC_INACTIVATED_INFLUENZA_A
GE_21_30YO_NONRESPONDER_28DY_DN

THAKAR_PBMC_INACTIVATED_INFLUENZA_A
GE_21_30YO_NONRESPONDER_28DY_UP

THAKAR_PBMC_INACTIVATED_INFLUENZA_A
GE_21_30YO_NONRESPONDER_7DY_DN

THAKAR_PBMC_INACTIVATED_INFLUENZA_A
GE_21_30YO_NONRESPONDER_7DY_UP

THAKAR_PBMC_INACTIVATED_INFLUENZA_A
GE_21_30YO_RESPONDERS_28DY_DN

THAKAR_PBMC_INACTIVATED_INFLUENZA_A
GE_21_30YO_RESPONDERS_28DY_UP

THAKAR_PBMC_INACTIVATED_INFLUENZA_A
GE_21_30YO_RESPONDERS_7DY_DN

THAKAR_PBMC_INACTIVATED_INFLUENZA_A
GE_21_30YO_RESPONDERS_7DY_UP

THAKAR_PBMC_INACTIVATED_INFLUENZA_A
GE_21_30YO_VS_70PLS_0DY_UP

THAKAR_PBMC_INACTIVATED_INFLUENZA_A
GE_70PLS_NONRESPONDER_2DY_DN

THAKAR_PBMC_INACTIVATED_INFLUENZA_A
GE_70PLS_NONRESPONDER_2DY_UP

THAKAR_PBMC_INACTIVATED_INFLUENZA_A
GE_70PLS_VS_21_30YO_0DY_UP

THAP1_TARGET_GENES
THEILGAARD_NEUTROPHIL_AT_SKIN_WOUND
_DN

THEILGAARD_NEUTROPHIL_AT_SKIN_WOUND
_UP

THEODOROU_MAMMARY_TUMORIGENESIS
THILLAINADESAN_ZNF217_TARGETS_DN
THILLAINADESAN_ZNF217_TARGETS_UP
THRA_TARGET_GENES
THRAP3_TARGET_GENES
THUM_MIR21_TARGETS_HEART_DISEASE_DN
THUM_MIR21_TARGETS_HEART_DISEASE_UP
THUM_SYSTOLIC_HEART_FAILURE_DN
THUM_SYSTOLIC_HEART_FAILURE_UP
TIAN_BHLHA15_TARGETS
TIAN_TNF_SIGNALING_NOT_VIA_NFKB
TIAN_TNF_SIGNALING_VIA_NFKB
TIEN_INTESTINE_PROBIOTICS_24HR_DN
TIEN_INTESTINE_PROBIOTICS_24HR_UP
TIEN_INTESTINE_PROBIOTICS_2HR_DN
TIEN_INTESTINE_PROBIOTICS_2HR_UP
TIEN_INTESTINE_PROBIOTICS_6HR_DN
TIEN_INTESTINE_PROBIOTICS_6HR_UP
TIGHT_JUNCTION
TIMOFEEVA_GROWTH_STRESS_VIA_STAT1_D
N

TING_SILENCED_BY_DICER
TITF1_Q3
TMTCGCGANR_UNKNOWN
TNCATNTCCYR_UNKNOWN
TOMIDA_LUNG_CANCER_POOR_SURVIVAL
TOMIDA_METASTASIS_DN
TOMIDA_METASTASIS_UP
TOMLINS_METASTASIS_DN
TOMLINS_METASTASIS_UP
TOMLINS_PROSTATE_CANCER_DN
TOMLINS_PROSTATE_CANCER_UP
TONG_INTERACT_WITH_PTTG1
TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSI
ON_ERYTHROCYTE_DN

TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSI
ON_ERYTHROCYTE_UP

TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSI
ON_GRANULOCYTE_DN

TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSI
ON_GRANULOCYTE_UP

TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSI
ON_HSC_DN

TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSI
ON_HSC_UP

TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSI
ON_MONOCYTE_DN

TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSI
ON_MONOCYTE_UP

TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSI
ON_SUSTAINDED_IN_ERYTHROCYTE_UP

TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSI
ON_SUSTAINED_IN_GRANULOCYTE_DN

TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSI
ON_SUSTAINED_IN_GRANULOCYTE_UP

TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSI
ON_SUSTAINED_IN_MONOCYTE_DN

TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSI
ON_SUSTAINED_IN_MONOCYTE_UP

TOOKER_GEMCITABINE_RESISTANCE_DN
TOOKER_GEMCITABINE_RESISTANCE_UP
TOP2B_TARGET_GENES
TORCHIA_TARGETS_OF_EWSR1_FLI1_FUSIO
N_DN

TORCHIA_TARGETS_OF_EWSR1_FLI1_FUSIO
N_TOP20_DN

TORCHIA_TARGETS_OF_EWSR1_FLI1_FUSIO
N_TOP20_UP

TORCHIA_TARGETS_OF_EWSR1_FLI1_FUSIO
N_UP

TOX4_TARGET_GENES
TOYOTA_TARGETS_OF_MIR34B_AND_MIR34C
TP73_TARGET_GENES
TRANSCRIPTION_ELONGATION_REGULATOR_
ACTIVITY

TRANSLATION
TRANSMEMBRANE_RECEPTOR_ACTIVITY
TRAVAGLINI_LUNG_ADVENTITIAL_FIBROBL
AST_CELL

TRAVAGLINI_LUNG_AIRWAY_SMOOTH_MUSCL
E_CELL

TRAVAGLINI_LUNG_ALVEOLAR_EPITHELIAL
_TYPE_1_CELL

TRAVAGLINI_LUNG_ALVEOLAR_EPITHELIAL
_TYPE_2_CELL

TRAVAGLINI_LUNG_ALVEOLAR_FIBROBLAST
_CELL

TRAVAGLINI_LUNG_ARTERY_CELL
TRAVAGLINI_LUNG_B_CELL
TRAVAGLINI_LUNG_BASAL_CELL
TRAVAGLINI_LUNG_BASOPHIL_MAST_1_CEL
L

TRAVAGLINI_LUNG_BASOPHIL_MAST_2_CEL
L

TRAVAGLINI_LUNG_BRONCHIAL_VESSEL_1_
CELL

TRAVAGLINI_LUNG_BRONCHIAL_VESSEL_2_
CELL

TRAVAGLINI_LUNG_CAPILLARY_AEROCYTE_
CELL

TRAVAGLINI_LUNG_CAPILLARY_CELL
TRAVAGLINI_LUNG_CAPILLARY_INTERMEDI
ATE_1_CELL

TRAVAGLINI_LUNG_CAPILLARY_INTERMEDI
ATE_2_CELL

TRAVAGLINI_LUNG_CD4_MEMORY_EFFECTOR
_T_CELL

TRAVAGLINI_LUNG_CD4_NAIVE_T_CELL
TRAVAGLINI_LUNG_CD8_MEMORY_EFFECTOR
_T_CELL

TRAVAGLINI_LUNG_CD8_NAIVE_T_CELL
TRAVAGLINI_LUNG_CILIATED_CELL
TRAVAGLINI_LUNG_CLASSICAL_MONOCYTE_
CELL

TRAVAGLINI_LUNG_CLUB_CELL
TRAVAGLINI_LUNG_DIFFERENTIATING_BAS
AL_CELL

TRAVAGLINI_LUNG_EREG_DENDRITIC_CELL
TRAVAGLINI_LUNG_FIBROMYOCYTE_CELL
TRAVAGLINI_LUNG_GOBLET_CELL
TRAVAGLINI_LUNG_IGSF21_DENDRITIC_CE
LL

TRAVAGLINI_LUNG_LIPOFIBROBLAST_CELL
TRAVAGLINI_LUNG_LYMPHATIC_CELL
TRAVAGLINI_LUNG_MACROPHAGE_CELL
TRAVAGLINI_LUNG_MESOTHELIAL_CELL
TRAVAGLINI_LUNG_MUCOUS_CELL
TRAVAGLINI_LUNG_MYELOID_DENDRITIC_T
YPE_1_CELL

TRAVAGLINI_LUNG_MYOFIBROBLAST_CELL
TRAVAGLINI_LUNG_NATURAL_KILLER_CELL
TRAVAGLINI_LUNG_NATURAL_KILLER_T_CE
LL

TRAVAGLINI_LUNG_NEUROENDOCRINE_CELL
TRAVAGLINI_LUNG_NEUTROPHIL_CELL
TRAVAGLINI_LUNG_NONCLASSICAL_MONOCY
TE_CELL

TRAVAGLINI_LUNG_OLR1_CLASSICAL_MONO
CYTE_CELL

TRAVAGLINI_LUNG_PERICYTE_CELL
TRAVAGLINI_LUNG_PLASMACYTOID_DENDRI
TIC_CELL

TRAVAGLINI_LUNG_PLATELET_MEGAKARYOC
YTE_CELL

TRAVAGLINI_LUNG_PROLIFERATING_BASAL
_CELL

TRAVAGLINI_LUNG_PROLIFERATING_MACRO
PHAGE_CELL

TRAVAGLINI_LUNG_PROLIFERATING_NK_T_
CELL

TRAVAGLINI_LUNG_PROXIMAL_BASAL_CELL
TRAVAGLINI_LUNG_PROXIMAL_CILIATED_C
ELL

TRAVAGLINI_LUNG_SEROUS_CELL
TRAVAGLINI_LUNG_SIGNALING_ALVEOLAR_
EPITHELIAL_TYPE_2_CELL

TRAVAGLINI_LUNG_TREM2_DENDRITIC_CEL
L

TRAVAGLINI_LUNG_VASCULAR_SMOOTH_MUS
CLE_CELL

TRAVAGLINI_LUNG_VEIN_CELL
TRAYNOR_RETT_SYNDROM_DN
TRAYNOR_RETT_SYNDROM_UP
TRICARBOXYLIC_ACID_CYCLE_INTERMEDIA
TE_METABOLIC_PROCESS

TRIP13_TARGET_GENES
TSAI_DNAJB4_TARGETS_DN
TSAI_DNAJB4_TARGETS_UP
TSAI_RESPONSE_TO_IONIZING_RADIATION
TSAI_RESPONSE_TO_RADIATION_THERAPY
TSANG_PBMC_FLUVIRIN_PANDEMRIX_ADULT
_CORR_WITH_CELL_FREQ_CD27HI_CD38HI_
CD20_NEG_PLASMABLASTS_AND_CD38PLUS_
OF_IGD_CD27PLUS_MEM_B_CELLS_7DY_POS
ITIVE

TSENG_ADIPOGENIC_POTENTIAL_DN
TSENG_ADIPOGENIC_POTENTIAL_UP
TSENG_IRS1_TARGETS_DN
TSENG_IRS1_TARGETS_UP
TSHZ1_TARGET_GENES
TST1_01
TSUDA_ALVEOLAR_SOFT_PART_SARCOMA
TSUNODA_CISPLATIN_RESISTANCE_DN
TSUNODA_CISPLATIN_RESISTANCE_UP
TSUTSUMI_FBXW8_TARGETS
TTANTCA_UNKNOWN
TTANWNANTGGM_UNKNOWN
TTAYRTAA_E4BP4_01
TTCCGTT_MIR191
TTCNRGNNNNTTC_HSF_Q6
TTCYNRGAA_STAT5B_01
TTCYRGAA_UNKNOWN
TTF1_Q6
TTGCACT_MIR130A_MIR301_MIR130B
TTGCCAA_MIR182
TTGCWCAAY_CEBPB_02
TTGGAGA_MIR5155P_MIR519E
TTGGGAG_MIR150
TTTGCAC_MIR19A_MIR19B
TTTGCAG_MIR518A2
TTTGTAG_MIR520D
TTTNNANAGCYR_UNKNOWN
TTTTGAG_MIR373
TUOMISTO_TUMOR_SUPPRESSION_BY_COL13
A1_DN

TUOMISTO_TUMOR_SUPPRESSION_BY_COL13
A1_UP

TURASHVILI_BREAST_CARCINOMA_DUCTAL_
VS_LOBULAR_DN

TURASHVILI_BREAST_CARCINOMA_DUCTAL_
VS_LOBULAR_UP

TURASHVILI_BREAST_DUCTAL_CARCINOMA_
VS_DUCTAL_NORMAL_DN

TURASHVILI_BREAST_DUCTAL_CARCINOMA_
VS_DUCTAL_NORMAL_UP

TURASHVILI_BREAST_DUCTAL_CARCINOMA_
VS_LOBULAR_NORMAL_DN

TURASHVILI_BREAST_DUCTAL_CARCINOMA_
VS_LOBULAR_NORMAL_UP

TURASHVILI_BREAST_LOBULAR_CARCINOMA
_VS_DUCTAL_NORMAL_DN

TURASHVILI_BREAST_LOBULAR_CARCINOMA
_VS_DUCTAL_NORMAL_UP

TURASHVILI_BREAST_LOBULAR_CARCINOMA
_VS_LOBULAR_NORMAL_DN

TURASHVILI_BREAST_LOBULAR_CARCINOMA
_VS_LOBULAR_NORMAL_UP

TURASHVILI_BREAST_NORMAL_DUCTAL_VS_
LOBULAR_DN

TURASHVILI_BREAST_NORMAL_DUCTAL_VS_
LOBULAR_UP

TURJANSKI_MAPK11_TARGETS
TURJANSKI_MAPK14_TARGETS
TURJANSKI_MAPK1_AND_MAPK2_TARGETS
TURJANSKI_MAPK7_TARGETS
TURJANSKI_MAPK8_AND_MAPK9_TARGETS