Browse Gene Sets

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[about the MSigDB collections]

  • H (hallmark gene sets, 50 gene sets)
  • C1 (positional gene sets, 278 gene sets)
  • C2 (curated gene sets, 6290 gene sets)
    • CGP (chemical and genetic perturbations, 3368 gene sets)
    • CP (canonical pathways, 2922 gene sets)
  • C3 (regulatory target gene sets, 3731 gene sets)
    • MIR (microRNA targets, 2598 gene sets)
    • TFT (all transcription factor targets, 1133 gene sets)
      • TFT:GTRD (GTRD transcription factor targets, 523 gene sets)
      • TFT:TFT_Legacy (legacy transcription factor targets, 610 gene sets)
  • C4 (computational gene sets, 858 gene sets)
    • CGN (cancer gene neighborhoods, 427 gene sets)
    • CM (cancer modules, 431 gene sets)
  • C5 (ontology gene sets, 14998 gene sets)
    • GO (Gene Ontology, 10185 gene sets)
      • GO:BP (GO biological process, 7481 gene sets)
      • GO:CC (GO cellular component, 996 gene sets)
      • GO:MF (GO molecular function, 1708 gene sets)
    • HPO (Human Phenotye Ontology, 4813 gene sets)
  • C6 (oncogenic signature gene sets, 189 gene sets)
  • C7 (immunologic signature gene sets, 5219 gene sets)
    • IMMUNESIGDB (ImmuneSigDB gene sets, 4872 gene sets)
    • VAX (vaccine response gene sets, 347 gene sets)
  • C8 (cell type signature gene sets, 671 gene sets)

Gene sets starting with X

Click on a gene set name to view its gene set page.

XBP1_01
XENOBIOTIC_METABOLIC_PROCESS
XIE_LT_HSC_S1PR3_OE_UP
XIE_ST_HSC_S1PR3_OE_DN
XIE_ST_HSC_S1PR3_OE_UP
XPO1_TARGET_GENES
XU_AKT1_TARGETS_48HR
XU_AKT1_TARGETS_6HR
XU_CREBBP_TARGETS_DN
XU_CREBBP_TARGETS_UP
XU_GH1_AUTOCRINE_TARGETS_DN
XU_GH1_AUTOCRINE_TARGETS_UP
XU_GH1_EXOGENOUS_TARGETS_DN
XU_GH1_EXOGENOUS_TARGETS_UP
XU_HGF_SIGNALING_NOT_VIA_AKT1_48HR_
DN

XU_HGF_SIGNALING_NOT_VIA_AKT1_48HR_
UP

XU_HGF_SIGNALING_NOT_VIA_AKT1_6HR
XU_HGF_TARGETS_INDUCED_BY_AKT1_48HR
_DN

XU_HGF_TARGETS_INDUCED_BY_AKT1_48HR
_UP

XU_HGF_TARGETS_INDUCED_BY_AKT1_6HR
XU_HGF_TARGETS_REPRESSED_BY_AKT1_DN
XU_HGF_TARGETS_REPRESSED_BY_AKT1_UP
XU_RESPONSE_TO_TRETINOIN_AND_NSC682
994_DN

XU_RESPONSE_TO_TRETINOIN_AND_NSC682
994_UP

XU_RESPONSE_TO_TRETINOIN_DN
XU_RESPONSE_TO_TRETINOIN_UP